RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 ZFYVE26Q68DK2 2539 aa7.45□□□□□ -1.22
RFX4-210ENST00000552773 IGHV3-64A0A075B6Q5 118 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 GAGE12JA6NER3 117 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 GAGE7O76087 117 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 PRSS2P07478 247 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 GAGE12FP0CL80 117 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 GAGE12GP0CL81 117 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 GAGE12IP0CL82 117 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 GAGE4Q13068 117 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 GAGE5Q13069 117 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 POLQO75417 2590 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 FBN2P35556 2912 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 PRM2P04554 102 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 GIG44P09565 113 aaPredicted RBP7.44□□□□□ -1.22
RFX4-210ENST00000552773 APOC4P55056 127 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 Q1RN00 199 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 HIST2H2BCQ6DN03 193 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
RFX4-210ENST00000552773 SBSPONQ8IVN8 264 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 FAM104AQ969W3 186 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 CDC42SE2Q9NRR3 84 aa7.44□□□□□ -1.22
RFX4-210ENST00000552773 CSMD1Q96PZ7 3565 aa7.43□□□□□ -1.22
RFX4-210ENST00000552773 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
RFX4-210ENST00000552773 TRBV30A0A0K0K1B3 111 aa7.43□□□□□ -1.22
RFX4-210ENST00000552773 LY6G6DO95868 133 aa7.43□□□□□ -1.22
RFX4-210ENST00000552773 ATXN8Q156A1 80 aa7.43□□□□□ -1.22
RFX4-210ENST00000552773 SORL1Q92673 2214 aa7.43□□□□□ -1.22
RFX4-210ENST00000552773 LYRM9A8MSI8 78 aa7.42□□□□□ -1.22
RFX4-210ENST00000552773 IGHV3-33P01772 117 aa7.42□□□□□ -1.22
RFX4-210ENST00000552773 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
RFX4-210ENST00000552773 LINC00242Q5T6M2 205 aa7.42□□□□□ -1.22
RFX4-210ENST00000552773 CDKN2A-AS1Q9UH64 79 aa7.42□□□□□ -1.22
RFX4-210ENST00000552773 TRAV8-3A0A0A6YYJ7 113 aa7.41□□□□□ -1.22
RFX4-210ENST00000552773 PLAC8L1A1L4L8 177 aa7.41□□□□□ -1.22
RFX4-210ENST00000552773 PCP4P48539 62 aa7.41□□□□□ -1.22
RFX4-210ENST00000552773 ABCA12Q86UK0 2595 aa7.41□□□□□ -1.22
RFX4-210ENST00000552773 NACAE9PAV3 2078 aa7.41□□□□□ -1.22
RFX4-210ENST00000552773 TRBV6-8A0A0A6YYG3 113 aa7.41□□□□□ -1.22
RFX4-210ENST00000552773 TEX48A0A1B0GUV7 120 aa7.41□□□□□ -1.22
RFX4-210ENST00000552773 RNASE13Q5GAN3 156 aaKnown RBP7.41□□□□□ -1.22
RFX4-210ENST00000552773 LINC00612Q8N6U2 182 aa7.41□□□□□ -1.22
RFX4-210ENST00000552773 MYO9AB2RTY4 2548 aa7.4□□□□□ -1.22
RFX4-210ENST00000552773 FHL2Q14192 279 aa7.4□□□□□ -1.23
RFX4-210ENST00000552773 WFDC2Q14508 124 aa7.4□□□□□ -1.23
RFX4-210ENST00000552773 NTM-AS1Q6ZSK4 140 aa7.4□□□□□ -1.23
RFX4-210ENST00000552773 LITAFQ99732 161 aa7.4□□□□□ -1.23
RFX4-210ENST00000552773 PRO0461Q9UI25 63 aa7.4□□□□□ -1.23
RFX4-210ENST00000552773 TRAV13-1A0A0B4J241 112 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 SH2D6Q7Z4S9 175 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 TEN1Q86WV5 123 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 PRIMA1Q86XR5 153 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 PPDPFLQ8WWR9 84 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 Q9UF83 564 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 PRO0255Q9UI72 69 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 EPG5Q9HCE0 2579 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 ITPR3Q14573 2671 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 TEX15Q9BXT5 2789 aa7.39□□□□□ -1.23
RFX4-210ENST00000552773 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 ETDBQ3ZM63 59 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 MEIG1Q5JSS6 88 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 LINC01561Q8N1V8 128 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 CHCHD5Q9BSY4 110 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 Q9H8V8 135 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 APCP25054 2843 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 SMIM1B2RUZ4 78 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 CRLF1O75462 422 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 TCL1BO95988 128 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 LINC00694P0DN24 101 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 SCGB1A1P11684 91 aa7.38□□□□□ -1.23
RFX4-210ENST00000552773 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 CRYBG3Q68DQ2 2970 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 CELSR2Q9HCU4 2923 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 HIST2H2BDQ6DRA6 164 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 LINC01600Q96MT4 127 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 WFDC10AQ9H1F0 79 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 SVEP1Q4LDE5 3571 aa7.37□□□□□ -1.23
RFX4-210ENST00000552773 MIFP14174 115 aa7.36□□□□□ -1.23
RFX4-210ENST00000552773 FOXI1Q12951 378 aa7.36□□□□□ -1.23
RFX4-210ENST00000552773 SS18Q15532 418 aa7.36□□□□□ -1.23
RFX4-210ENST00000552773 ICOSQ9Y6W8 199 aa7.36□□□□□ -1.23
RFX4-210ENST00000552773 SLC25A20O43772 301 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 DEFB130BP0DP73 79 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 DEFB130AP0DP74 79 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 COX6A2Q02221 97 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 COX7B2Q8TF08 81 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 TRAV13-2A0A0B4J235 113 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 GAGE12HA6NDE8 117 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 F5H768 121 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 H3BT86 120 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 H7C2G1 150 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
RFX4-210ENST00000552773 SPATA25Q9BR10 227 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 MXRA5Q9NR99 2828 aa7.35□□□□□ -1.23
RFX4-210ENST00000552773 HIVEP2P31629 2446 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms