RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NFE4Q86UQ8 179 aa14.81□□□□□ -0.04
PRDM4-205ENST00000550376 TRBV10-1A0A0K0K1A3 114 aa14.81□□□□□ -0.04
PRDM4-205ENST00000550376 SCGB1D4Q6XE38 83 aa14.81□□□□□ -0.04
PRDM4-205ENST00000550376 DGAT2L7PQ6IED9 249 aa14.8□□□□□ -0.04
PRDM4-205ENST00000550376 HIST1H4GQ99525 98 aa14.8□□□□□ -0.04
PRDM4-205ENST00000550376 HERVK_113P61574 105 aa14.8□□□□□ -0.04
PRDM4-205ENST00000550376 SEC11AP67812 179 aa14.8□□□□□ -0.04
PRDM4-205ENST00000550376 A8MZ25 164 aa14.8□□□□□ -0.04
PRDM4-205ENST00000550376 TRAV8-3A0A0A6YYJ7 113 aa14.79□□□□□ -0.04
PRDM4-205ENST00000550376 FAM222AQ5U5X8 452 aa14.79□□□□□ -0.04
PRDM4-205ENST00000550376 SPANXA1Q9NS26 97 aa14.79□□□□□ -0.04
PRDM4-205ENST00000550376 TMEM223A0PJW6 202 aa14.79□□□□□ -0.04
PRDM4-205ENST00000550376 IGHV4-30-4P0DP06 118 aa14.78□□□□□ -0.04
PRDM4-205ENST00000550376 VAMP3Q15836 100 aa14.78□□□□□ -0.04
PRDM4-205ENST00000550376 DAZ4Q86SG3 579 aaKnown RBP14.78□□□□□ -0.04
PRDM4-205ENST00000550376 CEND1Q8N111 149 aa14.78□□□□□ -0.04
PRDM4-205ENST00000550376 DAZ3Q9NR90 486 aaKnown RBP14.78□□□□□ -0.04
PRDM4-205ENST00000550376 TRBV6-4A0A1B0GX49 114 aa14.78□□□□□ -0.04
PRDM4-205ENST00000550376 RNF151Q2KHN1 245 aa14.78□□□□□ -0.04
PRDM4-205ENST00000550376 CMYA5Q8N3K9 4069 aa14.77□□□□□ -0.04
PRDM4-205ENST00000550376 A0A096LPF7 62 aa14.77□□□□□ -0.04
PRDM4-205ENST00000550376 J3QQQ9 107 aa14.77□□□□□ -0.04
PRDM4-205ENST00000550376 NHP2Q9NX24 153 aaKnown RBP14.77□□□□□ -0.04
PRDM4-205ENST00000550376 PRIMA1Q86XR5 153 aa14.77□□□□□ -0.05
PRDM4-205ENST00000550376 A6NDN8 102 aa14.76□□□□□ -0.05
PRDM4-205ENST00000550376 AMMECR1LQ6DCA0 310 aa14.76□□□□□ -0.05
PRDM4-205ENST00000550376 C3orf56Q8N813 242 aa14.76□□□□□ -0.05
PRDM4-205ENST00000550376 MRPS36P82909 103 aaKnown RBP14.76□□□□□ -0.05
PRDM4-205ENST00000550376 KRTAP10-11P60412 298 aa14.75□□□□□ -0.05
PRDM4-205ENST00000550376 IGHV4-28A0A0C4DH34 117 aa14.75□□□□□ -0.05
PRDM4-205ENST00000550376 SPINK8P0C7L1 97 aa14.75□□□□□ -0.05
PRDM4-205ENST00000550376 COX6A2Q02221 97 aa14.75□□□□□ -0.05
PRDM4-205ENST00000550376 TRAV13-1A0A0B4J241 112 aa14.74□□□□□ -0.05
PRDM4-205ENST00000550376 H3BUT2 72 aa14.74□□□□□ -0.05
PRDM4-205ENST00000550376 LGALS3P17931 250 aaKnown RBP14.74□□□□□ -0.05
PRDM4-205ENST00000550376 APOC4P55056 127 aa14.74□□□□□ -0.05
PRDM4-205ENST00000550376 KIR2DL5BQ8NHK3 375 aa14.74□□□□□ -0.05
PRDM4-205ENST00000550376 SBSPONQ8IVN8 264 aa14.73□□□□□ -0.05
PRDM4-205ENST00000550376 TM2D2Q9BX73 214 aa14.73□□□□□ -0.05
PRDM4-205ENST00000550376 CELA1Q9UNI1 258 aa14.73□□□□□ -0.05
PRDM4-205ENST00000550376 UBE2D1P51668 147 aa14.72□□□□□ -0.05
PRDM4-205ENST00000550376 GAGE6Q13070 117 aa14.72□□□□□ -0.05
PRDM4-205ENST00000550376 SRSF9Q13242 221 aaKnown RBP eCLIP14.72□□□□□ -0.05
PRDM4-205ENST00000550376 A0A0J9YY99 117 aa14.72□□□□□ -0.05
PRDM4-205ENST00000550376 GYPEP15421 78 aa14.72□□□□□ -0.05
PRDM4-205ENST00000550376 CDKN2A-AS1Q9UH64 79 aa14.72□□□□□ -0.05
PRDM4-205ENST00000550376 IGHV3-30-3P0DP02 117 aa14.71□□□□□ -0.05
PRDM4-205ENST00000550376 IGKV3OR2-268A0A0C4DH90 116 aa14.71□□□□□ -0.06
PRDM4-205ENST00000550376 LINC00612Q8N6U2 182 aa14.71□□□□□ -0.06
PRDM4-205ENST00000550376 TMEM243Q9BU79 118 aa14.71□□□□□ -0.06
PRDM4-205ENST00000550376 GEMIN7Q9H840 131 aaKnown RBP14.71□□□□□ -0.06
PRDM4-205ENST00000550376 NBEAL1Q6ZS30 2694 aa14.71□□□□□ -0.06
PRDM4-205ENST00000550376 SMIM9A6NGZ8 99 aa14.7□□□□□ -0.06
PRDM4-205ENST00000550376 H3BRM9 83 aa14.7□□□□□ -0.06
PRDM4-205ENST00000550376 UBE2L6O14933 153 aa14.7□□□□□ -0.06
PRDM4-205ENST00000550376 LEPROTO15243 131 aa14.7□□□□□ -0.06
PRDM4-205ENST00000550376 SMIM13P0DJ93 91 aa14.7□□□□□ -0.06
PRDM4-205ENST00000550376 TIMM21Q9BVV7 248 aa14.7□□□□□ -0.06
PRDM4-205ENST00000550376 TENM3Q9P273 2699 aa14.69□□□□□ -0.06
PRDM4-205ENST00000550376 TINCRA0A1B0GVN0 87 aa14.69□□□□□ -0.06
PRDM4-205ENST00000550376 CRYBA4P53673 196 aa14.69□□□□□ -0.06
PRDM4-205ENST00000550376 OR5A1Q8NGJ0 315 aa14.68□□□□□ -0.06
PRDM4-205ENST00000550376 CDC42SE2Q9NRR3 84 aa14.68□□□□□ -0.06
PRDM4-205ENST00000550376 C9orf118A6NHY6 69 aa14.68□□□□□ -0.06
PRDM4-205ENST00000550376 LINC00242Q5T6M2 205 aa14.68□□□□□ -0.06
PRDM4-205ENST00000550376 RETNQ9HD89 108 aa14.68□□□□□ -0.06
PRDM4-205ENST00000550376 WIPF1O43516 503 aa14.67□□□□□ -0.06
PRDM4-205ENST00000550376 Q8NAQ8 132 aa14.67□□□□□ -0.06
PRDM4-205ENST00000550376 CHCHD5Q9BSY4 110 aa14.67□□□□□ -0.06
PRDM4-205ENST00000550376 IGLV4-60A0A075B6I1 120 aa14.67□□□□□ -0.06
PRDM4-205ENST00000550376 HTN3P15516 51 aa14.67□□□□□ -0.06
PRDM4-205ENST00000550376 C10orf126Q8N4M7 172 aa14.67□□□□□ -0.06
PRDM4-205ENST00000550376 GTSF1LQ9H1H1 148 aa14.67□□□□□ -0.06
PRDM4-205ENST00000550376 TRBV6-8A0A0A6YYG3 113 aa14.66□□□□□ -0.06
PRDM4-205ENST00000550376 C12orf74Q32Q52 190 aa14.66□□□□□ -0.06
PRDM4-205ENST00000550376 CIDEAO60543 219 aa14.65□□□□□ -0.06
PRDM4-205ENST00000550376 TAL2Q16559 108 aa14.65□□□□□ -0.06
PRDM4-205ENST00000550376 DAD1P61803 113 aa14.64□□□□□ -0.07
PRDM4-205ENST00000550376 IGHV1-58A0A0C4DH39 117 aa14.64□□□□□ -0.07
PRDM4-205ENST00000550376 ATP6V0E2Q8NHE4 81 aa14.64□□□□□ -0.07
PRDM4-205ENST00000550376 VSIG2Q96IQ7 327 aa14.64□□□□□ -0.07
PRDM4-205ENST00000550376 PRO0255Q9UI72 69 aa14.64□□□□□ -0.07
PRDM4-205ENST00000550376 PAX4O43316 350 aa14.63□□□□□ -0.07
PRDM4-205ENST00000550376 RNF183Q96D59 192 aa14.63□□□□□ -0.07
PRDM4-205ENST00000550376 LYRM9A8MSI8 78 aa14.63□□□□□ -0.07
PRDM4-205ENST00000550376 G3V4G9 280 aa14.63□□□□□ -0.07
PRDM4-205ENST00000550376 VPS25Q9BRG1 176 aa14.63□□□□□ -0.07
PRDM4-205ENST00000550376 TMEM101Q96IK0 257 aa14.62□□□□□ -0.07
PRDM4-205ENST00000550376 CSDC2Q9Y534 153 aaKnown RBP14.62□□□□□ -0.07
PRDM4-205ENST00000550376 TMEM262E9PQX1 116 aa14.61□□□□□ -0.07
PRDM4-205ENST00000550376 SAMD5Q5TGI4 173 aa14.61□□□□□ -0.07
PRDM4-205ENST00000550376 NDUFA12Q9UI09 145 aa14.61□□□□□ -0.07
PRDM4-205ENST00000550376 TRAV26-1A0A087WT03 109 aa14.6□□□□□ -0.07
PRDM4-205ENST00000550376 A0A0J9YXY3 114 aa14.6□□□□□ -0.07
PRDM4-205ENST00000550376 APOMO95445 188 aa14.6□□□□□ -0.07
PRDM4-205ENST00000550376 PRB2P02812 416 aaPredicted RBP14.6□□□□□ -0.07
PRDM4-205ENST00000550376 OCIAD2Q56VL3 154 aa14.6□□□□□ -0.07
PRDM4-205ENST00000550376 F5H768 121 aa14.6□□□□□ -0.07
PRDM4-205ENST00000550376 IGHV3-30P01768 117 aa14.6□□□□□ -0.07
PRDM4-205ENST00000550376 IGHV3-30-5P0DP03 117 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms