RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 GAGE5Q13069 117 aa12.17□□□□□ -0.46
PTPRO-209ENST00000543886 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
PTPRO-209ENST00000543886 TRGV4A0A0C4DH28 118 aa12.16□□□□□ -0.46
PTPRO-209ENST00000543886 UBE2D3P61077 147 aa12.16□□□□□ -0.46
PTPRO-209ENST00000543886 UBE2D2P62837 147 aa12.16□□□□□ -0.46
PTPRO-209ENST00000543886 Q6ZUT4 128 aa12.16□□□□□ -0.46
PTPRO-209ENST00000543886 J3QQQ9 107 aa12.15□□□□□ -0.46
PTPRO-209ENST00000543886 LEPROTO15243 131 aa12.15□□□□□ -0.46
PTPRO-209ENST00000543886 TSPEAR-AS2P59090 65 aa12.15□□□□□ -0.46
PTPRO-209ENST00000543886 MRPS36P82909 103 aaKnown RBP12.15□□□□□ -0.46
PTPRO-209ENST00000543886 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
PTPRO-209ENST00000543886 PLEKHB2Q96CS7 222 aa12.15□□□□□ -0.46
PTPRO-209ENST00000543886 IGLL5B9A064 214 aa12.15□□□□□ -0.46
PTPRO-209ENST00000543886 F8W1H4 67 aa12.15□□□□□ -0.46
PTPRO-209ENST00000543886 TIMM21Q9BVV7 248 aa12.15□□□□□ -0.46
PTPRO-209ENST00000543886 TEX48A0A1B0GUV7 120 aa12.14□□□□□ -0.47
PTPRO-209ENST00000543886 TRBV6-4A0A1B0GX49 114 aa12.14□□□□□ -0.47
PTPRO-209ENST00000543886 F8P00451 2351 aa12.14□□□□□ -0.47
PTPRO-209ENST00000543886 J3QR89 54 aa12.14□□□□□ -0.47
PTPRO-209ENST00000543886 C12orf74Q32Q52 190 aa12.13□□□□□ -0.47
PTPRO-209ENST00000543886 TENM1Q9UKZ4 2725 aa12.13□□□□□ -0.47
PTPRO-209ENST00000543886 IGHV3-64A0A075B6Q5 118 aa12.12□□□□□ -0.47
PTPRO-209ENST00000543886 TINCRA0A1B0GVN0 87 aa12.12□□□□□ -0.47
PTPRO-209ENST00000543886 SRSF9Q13242 221 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTPRO-209ENST00000543886 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
PTPRO-209ENST00000543886 SMIM9A6NGZ8 99 aa12.12□□□□□ -0.47
PTPRO-209ENST00000543886 SMAGPQ0VAQ4 97 aa12.11□□□□□ -0.47
PTPRO-209ENST00000543886 NTM-AS1Q6ZSK4 140 aa12.11□□□□□ -0.47
PTPRO-209ENST00000543886 A0A0J9YY99 117 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 DEFB130BP0DP73 79 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 DEFB130AP0DP74 79 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 KIR2DL5BQ8NHK3 375 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 GEMIN7Q9H840 131 aaKnown RBP12.1□□□□□ -0.47
PTPRO-209ENST00000543886 VWFP04275 2813 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 APOC4P55056 127 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 FHL2Q14192 279 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 X6R8D5 127 aa12.1□□□□□ -0.47
PTPRO-209ENST00000543886 LINC00694P0DN24 101 aa12.09□□□□□ -0.47
PTPRO-209ENST00000543886 SCGB1A1P11684 91 aa12.09□□□□□ -0.47
PTPRO-209ENST00000543886 UBE2D1P51668 147 aa12.09□□□□□ -0.47
PTPRO-209ENST00000543886 SPANXB1Q9NS25 103 aaPredicted RBP12.09□□□□□ -0.47
PTPRO-209ENST00000543886 TMEM238LA0A1B0GVL6 79 aa12.09□□□□□ -0.47
PTPRO-209ENST00000543886 A0A1B0GWB2 263 aa12.09□□□□□ -0.47
PTPRO-209ENST00000543886 A6NJY4 79 aa12.09□□□□□ -0.47
PTPRO-209ENST00000543886 UBE2L6O14933 153 aa12.09□□□□□ -0.47
PTPRO-209ENST00000543886 TMEM243Q9BU79 118 aa12.09□□□□□ -0.47
PTPRO-209ENST00000543886 CSDC2Q9Y534 153 aaKnown RBP12.09□□□□□ -0.47
PTPRO-209ENST00000543886 SBSPONQ8IVN8 264 aa12.08□□□□□ -0.48
PTPRO-209ENST00000543886 IGHV3-30-3P0DP02 117 aa12.07□□□□□ -0.48
PTPRO-209ENST00000543886 LINC00612Q8N6U2 182 aa12.07□□□□□ -0.48
PTPRO-209ENST00000543886 WFDC9Q8NEX5 89 aa12.07□□□□□ -0.48
PTPRO-209ENST00000543886 ATRQ13535 2644 aa12.07□□□□□ -0.48
PTPRO-209ENST00000543886 SIGMAR1Q99720 223 aa12.07□□□□□ -0.48
PTPRO-209ENST00000543886 IGHV1-58A0A0C4DH39 117 aa12.06□□□□□ -0.48
PTPRO-209ENST00000543886 WFDC2Q14508 124 aa12.06□□□□□ -0.48
PTPRO-209ENST00000543886 DEFB135Q30KP9 77 aa12.06□□□□□ -0.48
PTPRO-209ENST00000543886 TRAV8-3A0A0A6YYJ7 113 aa12.06□□□□□ -0.48
PTPRO-209ENST00000543886 H3BMG7 143 aa12.06□□□□□ -0.48
PTPRO-209ENST00000543886 TIRAPP58753 221 aa12.06□□□□□ -0.48
PTPRO-209ENST00000543886 TMEM101Q96IK0 257 aa12.05□□□□□ -0.48
PTPRO-209ENST00000543886 SPINK8P0C7L1 97 aa12.04□□□□□ -0.48
PTPRO-209ENST00000543886 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
PTPRO-209ENST00000543886 H7C423 109 aa12.04□□□□□ -0.48
PTPRO-209ENST00000543886 TEP1Q99973 2627 aaKnown RBP12.03□□□□□ -0.48
PTPRO-209ENST00000543886 GAGE12HA6NDE8 117 aa12.03□□□□□ -0.48
PTPRO-209ENST00000543886 WIPF1O43516 503 aa12.03□□□□□ -0.48
PTPRO-209ENST00000543886 HERVK_113P63121 156 aa12.03□□□□□ -0.48
PTPRO-209ENST00000543886 CDKN2A-AS1Q9UH64 79 aa12.03□□□□□ -0.48
PTPRO-209ENST00000543886 IGLV5-45A0A087WSX0 123 aa12.02□□□□□ -0.48
PTPRO-209ENST00000543886 LYRM9A8MSI8 78 aa12.02□□□□□ -0.48
PTPRO-209ENST00000543886 IGHV3-30P01768 117 aa12.02□□□□□ -0.48
PTPRO-209ENST00000543886 IGHV3-30-5P0DP03 117 aa12.02□□□□□ -0.48
PTPRO-209ENST00000543886 FAM222AQ5U5X8 452 aa12.02□□□□□ -0.48
PTPRO-209ENST00000543886 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.48
PTPRO-209ENST00000543886 ETDBQ3ZM63 59 aa12.02□□□□□ -0.49
PTPRO-209ENST00000543886 C10orf126Q8N4M7 172 aa12.02□□□□□ -0.49
PTPRO-209ENST00000543886 SPATA25Q9BR10 227 aa12.02□□□□□ -0.49
PTPRO-209ENST00000543886 TRAV13-1A0A0B4J241 112 aa12.01□□□□□ -0.49
PTPRO-209ENST00000543886 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PTPRO-209ENST00000543886 BAHCC1Q9P281 2608 aa12.01□□□□□ -0.49
PTPRO-209ENST00000543886 TRBV6-8A0A0A6YYG3 113 aa12.01□□□□□ -0.49
PTPRO-209ENST00000543886 A0A0J9YXY3 114 aa12.01□□□□□ -0.49
PTPRO-209ENST00000543886 FAM19A3Q7Z5A8 133 aa12.01□□□□□ -0.49
PTPRO-209ENST00000543886 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
PTPRO-209ENST00000543886 PRO0461Q9UI25 63 aa12.01□□□□□ -0.49
PTPRO-209ENST00000543886 GYPEP15421 78 aa12□□□□□ -0.49
PTPRO-209ENST00000543886 COX6A2Q02221 97 aa12□□□□□ -0.49
PTPRO-209ENST00000543886 GAGE6Q13070 117 aa11.99□□□□□ -0.49
PTPRO-209ENST00000543886 SH2D6Q7Z4S9 175 aa11.99□□□□□ -0.49
PTPRO-209ENST00000543886 PGPEP1Q9NXJ5 209 aa11.99□□□□□ -0.49
PTPRO-209ENST00000543886 IGHV4-28A0A0C4DH34 117 aa11.99□□□□□ -0.49
PTPRO-209ENST00000543886 DEFB4AO15263 64 aa11.99□□□□□ -0.49
PTPRO-209ENST00000543886 LYRM7Q5U5X0 104 aa11.99□□□□□ -0.49
PTPRO-209ENST00000543886 CHCHD5Q9BSY4 110 aa11.99□□□□□ -0.49
PTPRO-209ENST00000543886 PRO0255Q9UI72 69 aa11.99□□□□□ -0.49
PTPRO-209ENST00000543886 A8MZ25 164 aa11.98□□□□□ -0.49
PTPRO-209ENST00000543886 IGHV4-30-4P0DP06 118 aa11.98□□□□□ -0.49
PTPRO-209ENST00000543886 ZFAND6Q6FIF0 208 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms