RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 TSPEAR-AS2P59090 65 aa12.44□□□□□ -0.42
GABARAPL1-210ENST00000541960 MYMXA0A1B0GTQ4 84 aa12.43□□□□□ -0.42
GABARAPL1-210ENST00000541960 NPSP0C0P6 89 aa12.43□□□□□ -0.42
GABARAPL1-210ENST00000541960 ZNF22P17026 224 aaPredicted RBP12.43□□□□□ -0.42
GABARAPL1-210ENST00000541960 FAM222AQ5U5X8 452 aa12.43□□□□□ -0.42
GABARAPL1-210ENST00000541960 SBSPONQ8IVN8 264 aa12.43□□□□□ -0.42
GABARAPL1-210ENST00000541960 CRYBA4P53673 196 aa12.43□□□□□ -0.42
GABARAPL1-210ENST00000541960 COL6A5A8TX70 2615 aa12.42□□□□□ -0.42
GABARAPL1-210ENST00000541960 IGHV4-28A0A0C4DH34 117 aa12.42□□□□□ -0.42
GABARAPL1-210ENST00000541960 MRPS36P82909 103 aaKnown RBP12.41□□□□□ -0.42
GABARAPL1-210ENST00000541960 TMEM223A0PJW6 202 aa12.41□□□□□ -0.42
GABARAPL1-210ENST00000541960 SHISA2Q6UWI4 295 aa12.41□□□□□ -0.42
GABARAPL1-210ENST00000541960 TAX1BP3O14907 124 aa12.41□□□□□ -0.42
GABARAPL1-210ENST00000541960 Q8NAQ8 132 aa12.41□□□□□ -0.42
GABARAPL1-210ENST00000541960 ORAOV1Q8WV07 137 aa12.41□□□□□ -0.42
GABARAPL1-210ENST00000541960 K7EP13 123 aa12.4□□□□□ -0.42
GABARAPL1-210ENST00000541960 HERVK_113P61574 105 aa12.4□□□□□ -0.42
GABARAPL1-210ENST00000541960 TIMM21Q9BVV7 248 aa12.4□□□□□ -0.42
GABARAPL1-210ENST00000541960 GTSF1LQ9H1H1 148 aa12.4□□□□□ -0.42
GABARAPL1-210ENST00000541960 ZNF815PA8K554 130 aa12.39□□□□□ -0.43
GABARAPL1-210ENST00000541960 PLEKHB2Q96CS7 222 aa12.39□□□□□ -0.43
GABARAPL1-210ENST00000541960 RNF183Q96D59 192 aa12.39□□□□□ -0.43
GABARAPL1-210ENST00000541960 CELA1Q9UNI1 258 aa12.39□□□□□ -0.43
GABARAPL1-210ENST00000541960 COX11Q9Y6N1 276 aa12.39□□□□□ -0.43
GABARAPL1-210ENST00000541960 IGHV3-64A0A075B6Q5 118 aa12.38□□□□□ -0.43
GABARAPL1-210ENST00000541960 LYRM9A8MSI8 78 aa12.38□□□□□ -0.43
GABARAPL1-210ENST00000541960 FXYD2P54710 66 aa12.38□□□□□ -0.43
GABARAPL1-210ENST00000541960 SEC11AP67812 179 aa12.38□□□□□ -0.43
GABARAPL1-210ENST00000541960 UBE2D1P51668 147 aa12.37□□□□□ -0.43
GABARAPL1-210ENST00000541960 EGFEM1PQ0D2K5 195 aa12.37□□□□□ -0.43
GABARAPL1-210ENST00000541960 GCSHP23434 173 aa12.37□□□□□ -0.43
GABARAPL1-210ENST00000541960 DGAT2L7PQ6IED9 249 aa12.37□□□□□ -0.43
GABARAPL1-210ENST00000541960 TINCRA0A1B0GVN0 87 aa12.36□□□□□ -0.43
GABARAPL1-210ENST00000541960 TMEM243Q9BU79 118 aa12.36□□□□□ -0.43
GABARAPL1-210ENST00000541960 CSDC2Q9Y534 153 aaKnown RBP12.36□□□□□ -0.43
GABARAPL1-210ENST00000541960 J3QQQ9 107 aa12.35□□□□□ -0.43
GABARAPL1-210ENST00000541960 MIFP14174 115 aa12.35□□□□□ -0.43
GABARAPL1-210ENST00000541960 GYPEP15421 78 aa12.35□□□□□ -0.43
GABARAPL1-210ENST00000541960 CEND1Q8N111 149 aa12.35□□□□□ -0.43
GABARAPL1-210ENST00000541960 LEPROTO15243 131 aa12.34□□□□□ -0.43
GABARAPL1-210ENST00000541960 CDC42SE2Q9NRR3 84 aa12.34□□□□□ -0.43
GABARAPL1-210ENST00000541960 TM2D2Q9BX73 214 aa12.34□□□□□ -0.43
GABARAPL1-210ENST00000541960 TRBV6-8A0A0A6YYG3 113 aa12.33□□□□□ -0.43
GABARAPL1-210ENST00000541960 TRAV8-3A0A0A6YYJ7 113 aa12.33□□□□□ -0.43
GABARAPL1-210ENST00000541960 PRO0255Q9UI72 69 aa12.33□□□□□ -0.43
GABARAPL1-210ENST00000541960 COX6A2Q02221 97 aa12.33□□□□□ -0.44
GABARAPL1-210ENST00000541960 G3V4G9 280 aa12.33□□□□□ -0.44
GABARAPL1-210ENST00000541960 SCGB1D4Q6XE38 83 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 HIST1H4GQ99525 98 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 A6NDN8 102 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 UBE2L6O14933 153 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 OR5A1Q8NGJ0 315 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 IGHV3-30-3P0DP02 117 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 LGALS3P17931 250 aaKnown RBP12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 DAD1P61803 113 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 GAGE6Q13070 117 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 VSIG2Q96IQ7 327 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 RETNQ9HD89 108 aa12.32□□□□□ -0.44
GABARAPL1-210ENST00000541960 A0A0J9YY99 117 aa12.31□□□□□ -0.44
GABARAPL1-210ENST00000541960 TAL2Q16559 108 aa12.31□□□□□ -0.44
GABARAPL1-210ENST00000541960 LINC00242Q5T6M2 205 aa12.31□□□□□ -0.44
GABARAPL1-210ENST00000541960 CDKN2A-AS1Q9UH64 79 aa12.31□□□□□ -0.44
GABARAPL1-210ENST00000541960 SPINK8P0C7L1 97 aa12.31□□□□□ -0.44
GABARAPL1-210ENST00000541960 AMMECR1LQ6DCA0 310 aa12.31□□□□□ -0.44
GABARAPL1-210ENST00000541960 A8MZ25 164 aa12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 ATP6V0E2Q8NHE4 81 aa12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 NOTCH1P46531 2555 aa12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 IGLV5-45A0A087WSX0 123 aa12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 A0A096LPF7 62 aa12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 K7ERJ3 54 aa12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 GEMIN7Q9H840 131 aaKnown RBP12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 TRAV13-1A0A0B4J241 112 aa12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 TIRAPP58753 221 aa12.3□□□□□ -0.44
GABARAPL1-210ENST00000541960 H7C423 109 aa12.29□□□□□ -0.44
GABARAPL1-210ENST00000541960 PAX4O43316 350 aa12.29□□□□□ -0.44
GABARAPL1-210ENST00000541960 IGLV4-60A0A075B6I1 120 aa12.29□□□□□ -0.44
GABARAPL1-210ENST00000541960 IGHV1-58A0A0C4DH39 117 aa12.29□□□□□ -0.44
GABARAPL1-210ENST00000541960 H3BRM9 83 aa12.29□□□□□ -0.44
GABARAPL1-210ENST00000541960 FAM19A3Q7Z5A8 133 aa12.29□□□□□ -0.44
GABARAPL1-210ENST00000541960 PTTG1IPP53801 180 aa12.28□□□□□ -0.44
GABARAPL1-210ENST00000541960 SPART-AS1P0CW21 52 aa12.28□□□□□ -0.44
GABARAPL1-210ENST00000541960 RAB37Q96AX2 223 aa12.28□□□□□ -0.44
GABARAPL1-210ENST00000541960 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
GABARAPL1-210ENST00000541960 C10orf126Q8N4M7 172 aa12.28□□□□□ -0.44
GABARAPL1-210ENST00000541960 TMEM101Q96IK0 257 aa12.27□□□□□ -0.44
GABARAPL1-210ENST00000541960 NAA38Q9BRA0 125 aaKnown RBP12.27□□□□□ -0.44
GABARAPL1-210ENST00000541960 NHP2Q9NX24 153 aaKnown RBP12.27□□□□□ -0.44
GABARAPL1-210ENST00000541960 TENM3Q9P273 2699 aa12.26□□□□□ -0.45
GABARAPL1-210ENST00000541960 ATP5G1P05496 136 aa12.26□□□□□ -0.45
GABARAPL1-210ENST00000541960 TRAV26-1A0A087WT03 109 aa12.26□□□□□ -0.45
GABARAPL1-210ENST00000541960 SMAGPQ0VAQ4 97 aa12.26□□□□□ -0.45
GABARAPL1-210ENST00000541960 NBEAL1Q6ZS30 2694 aa12.25□□□□□ -0.45
GABARAPL1-210ENST00000541960 HERVK_113P63121 156 aa12.25□□□□□ -0.45
GABARAPL1-210ENST00000541960 C9orf118A6NHY6 69 aa12.24□□□□□ -0.45
GABARAPL1-210ENST00000541960 SMIM13P0DJ93 91 aa12.24□□□□□ -0.45
GABARAPL1-210ENST00000541960 F5H768 121 aa12.24□□□□□ -0.45
GABARAPL1-210ENST00000541960 SRSF9Q13242 221 aaKnown RBP eCLIP12.24□□□□□ -0.45
GABARAPL1-210ENST00000541960 HTN3P15516 51 aa12.24□□□□□ -0.45
GABARAPL1-210ENST00000541960 VAMP3Q15836 100 aa12.23□□□□□ -0.45
GABARAPL1-210ENST00000541960 SAMD5Q5TGI4 173 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms