RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 TMEM262E9PQX1 116 aa12.33□□□□□ -0.44
EPB41L3-204ENST00000540638 LY6G6DO95868 133 aa12.33□□□□□ -0.44
EPB41L3-204ENST00000540638 HTN3P15516 51 aa12.33□□□□□ -0.44
EPB41L3-204ENST00000540638 CDKN2A-AS1Q9UH64 79 aa12.33□□□□□ -0.44
EPB41L3-204ENST00000540638 RNASE1P07998 156 aaKnown RBP12.32□□□□□ -0.44
EPB41L3-204ENST00000540638 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
EPB41L3-204ENST00000540638 UFSP1Q6NVU6 142 aa12.32□□□□□ -0.44
EPB41L3-204ENST00000540638 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
EPB41L3-204ENST00000540638 LINC00694P0DN24 101 aa12.32□□□□□ -0.44
EPB41L3-204ENST00000540638 C11orf68Q9H3H3 251 aaKnown RBP12.32□□□□□ -0.44
EPB41L3-204ENST00000540638 LEPROTO15243 131 aa12.31□□□□□ -0.44
EPB41L3-204ENST00000540638 KRTAP1-1Q07627 177 aa12.3□□□□□ -0.44
EPB41L3-204ENST00000540638 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
EPB41L3-204ENST00000540638 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
EPB41L3-204ENST00000540638 PTH2Q96A98 100 aa12.3□□□□□ -0.44
EPB41L3-204ENST00000540638 K7EQD1 137 aa12.3□□□□□ -0.44
EPB41L3-204ENST00000540638 CLPSL2Q6UWE3 100 aa12.3□□□□□ -0.44
EPB41L3-204ENST00000540638 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
EPB41L3-204ENST00000540638 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
EPB41L3-204ENST00000540638 PDZD2O15018 2839 aa12.29□□□□□ -0.44
EPB41L3-204ENST00000540638 TMEM238C9JI98 176 aa12.29□□□□□ -0.44
EPB41L3-204ENST00000540638 CRLF1O75462 422 aa12.29□□□□□ -0.44
EPB41L3-204ENST00000540638 TSPAN13O95857 204 aa12.29□□□□□ -0.44
EPB41L3-204ENST00000540638 HILS1P60008 231 aa12.29□□□□□ -0.44
EPB41L3-204ENST00000540638 VWFP04275 2813 aa12.28□□□□□ -0.44
EPB41L3-204ENST00000540638 OTOGQ6ZRI0 2925 aa12.28□□□□□ -0.44
EPB41L3-204ENST00000540638 RS1O15537 224 aa12.28□□□□□ -0.44
EPB41L3-204ENST00000540638 C10orf126Q8N4M7 172 aa12.28□□□□□ -0.44
EPB41L3-204ENST00000540638 NDUFA11Q86Y39 141 aa12.27□□□□□ -0.44
EPB41L3-204ENST00000540638 PRO1854Q9UHT4 67 aa12.27□□□□□ -0.44
EPB41L3-204ENST00000540638 ERG28Q9UKR5 140 aa12.27□□□□□ -0.44
EPB41L3-204ENST00000540638 CFC1BP0CG36 223 aa12.27□□□□□ -0.45
EPB41L3-204ENST00000540638 CFC1P0CG37 223 aa12.27□□□□□ -0.45
EPB41L3-204ENST00000540638 FHL3Q13643 280 aa12.27□□□□□ -0.45
EPB41L3-204ENST00000540638 TMEM101Q96IK0 257 aa12.27□□□□□ -0.45
EPB41L3-204ENST00000540638 A0A0J9YXY3 114 aa12.27□□□□□ -0.45
EPB41L3-204ENST00000540638 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
EPB41L3-204ENST00000540638 C1QTNF4Q9BXJ3 329 aa12.26□□□□□ -0.45
EPB41L3-204ENST00000540638 SPANXA1Q9NS26 97 aa12.26□□□□□ -0.45
EPB41L3-204ENST00000540638 IGHV3-30P01768 117 aa12.26□□□□□ -0.45
EPB41L3-204ENST00000540638 IGHV3-30-5P0DP03 117 aa12.26□□□□□ -0.45
EPB41L3-204ENST00000540638 Q9H8V8 135 aa12.26□□□□□ -0.45
EPB41L3-204ENST00000540638 HIVEP1P15822 2718 aa12.25□□□□□ -0.45
EPB41L3-204ENST00000540638 MAST4O15021 2626 aa12.25□□□□□ -0.45
EPB41L3-204ENST00000540638 COX6A2Q02221 97 aa12.25□□□□□ -0.45
EPB41L3-204ENST00000540638 PRIMA1Q86XR5 153 aa12.25□□□□□ -0.45
EPB41L3-204ENST00000540638 J3QR89 54 aa12.24□□□□□ -0.45
EPB41L3-204ENST00000540638 IGLV1-51P01701 117 aa12.24□□□□□ -0.45
EPB41L3-204ENST00000540638 DEFB135Q30KP9 77 aa12.24□□□□□ -0.45
EPB41L3-204ENST00000540638 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
EPB41L3-204ENST00000540638 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
EPB41L3-204ENST00000540638 IGHV1-58A0A0C4DH39 117 aa12.23□□□□□ -0.45
EPB41L3-204ENST00000540638 INSL3P51460 131 aa12.23□□□□□ -0.45
EPB41L3-204ENST00000540638 C9JAW5 83 aa12.22□□□□□ -0.45
EPB41L3-204ENST00000540638 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
EPB41L3-204ENST00000540638 LYRM7Q5U5X0 104 aa12.22□□□□□ -0.45
EPB41L3-204ENST00000540638 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
EPB41L3-204ENST00000540638 NSD1Q96L73 2696 aaPredicted RBP12.22□□□□□ -0.45
EPB41L3-204ENST00000540638 CIDEAO60543 219 aa12.22□□□□□ -0.45
EPB41L3-204ENST00000540638 SPATA3Q8NHX4 192 aa12.22□□□□□ -0.45
EPB41L3-204ENST00000540638 TENM1Q9UKZ4 2725 aa12.22□□□□□ -0.45
EPB41L3-204ENST00000540638 ADAMTSL4-AS1Q5T5F5 129 aa12.21□□□□□ -0.45
EPB41L3-204ENST00000540638 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
EPB41L3-204ENST00000540638 BEAN1Q3B7T3 259 aa12.21□□□□□ -0.45
EPB41L3-204ENST00000540638 VSIG2Q96IQ7 327 aa12.21□□□□□ -0.45
EPB41L3-204ENST00000540638 PYGO1Q9Y3Y4 419 aa12.21□□□□□ -0.45
EPB41L3-204ENST00000540638 TRAV4A0A0B4J268 109 aa12.21□□□□□ -0.46
EPB41L3-204ENST00000540638 TCL1BO95988 128 aa12.21□□□□□ -0.46
EPB41L3-204ENST00000540638 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.46
EPB41L3-204ENST00000540638 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.46
EPB41L3-204ENST00000540638 C5orf38Q86SI9 138 aa12.21□□□□□ -0.46
EPB41L3-204ENST00000540638 F8W1H4 67 aa12.2□□□□□ -0.46
EPB41L3-204ENST00000540638 AMELXQ99217 191 aa12.2□□□□□ -0.46
EPB41L3-204ENST00000540638 CMC4P56277 68 aaPredicted RBP12.19□□□□□ -0.46
EPB41L3-204ENST00000540638 SMAGPQ0VAQ4 97 aa12.19□□□□□ -0.46
EPB41L3-204ENST00000540638 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.19□□□□□ -0.46
EPB41L3-204ENST00000540638 STAB1Q9NY15 2570 aa12.19□□□□□ -0.46
EPB41L3-204ENST00000540638 GIG44P09565 113 aaPredicted RBP12.19□□□□□ -0.46
EPB41L3-204ENST00000540638 GYPEP15421 78 aa12.19□□□□□ -0.46
EPB41L3-204ENST00000540638 UBE2D1P51668 147 aa12.19□□□□□ -0.46
EPB41L3-204ENST00000540638 KRTAP10-3P60369 221 aa12.19□□□□□ -0.46
EPB41L3-204ENST00000540638 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
EPB41L3-204ENST00000540638 A8MTW9 85 aa12.18□□□□□ -0.46
EPB41L3-204ENST00000540638 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
EPB41L3-204ENST00000540638 DAZ4Q86SG3 579 aaKnown RBP12.18□□□□□ -0.46
EPB41L3-204ENST00000540638 DAZ3Q9NR90 486 aaKnown RBP12.18□□□□□ -0.46
EPB41L3-204ENST00000540638 NOTCH1P46531 2555 aa12.17□□□□□ -0.46
EPB41L3-204ENST00000540638 G3V4G9 280 aa12.16□□□□□ -0.46
EPB41L3-204ENST00000540638 PFN2P35080 140 aa12.16□□□□□ -0.46
EPB41L3-204ENST00000540638 HERVK_113P63121 156 aa12.16□□□□□ -0.46
EPB41L3-204ENST00000540638 LINC00242Q5T6M2 205 aa12.16□□□□□ -0.46
EPB41L3-204ENST00000540638 XCL1P47992 114 aa12.16□□□□□ -0.46
EPB41L3-204ENST00000540638 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.15□□□□□ -0.46
EPB41L3-204ENST00000540638 FAM104AQ969W3 186 aa12.15□□□□□ -0.46
EPB41L3-204ENST00000540638 C16orf95Q9H693 158 aa12.15□□□□□ -0.46
EPB41L3-204ENST00000540638 IGLV10-54A0A075B6I4 117 aa12.15□□□□□ -0.46
EPB41L3-204ENST00000540638 UBE2D3P61077 147 aa12.15□□□□□ -0.46
EPB41L3-204ENST00000540638 UBE2D2P62837 147 aa12.15□□□□□ -0.46
EPB41L3-204ENST00000540638 SPANXB1Q9NS25 103 aaPredicted RBP12.15□□□□□ -0.47
EPB41L3-204ENST00000540638 TRBV10-1A0A0K0K1A3 114 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms