RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GAGE7O76087 117 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GAGE12FP0CL80 117 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GAGE12GP0CL81 117 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GAGE12IP0CL82 117 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 DGAT2L7PQ6IED9 249 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 SBSPONQ8IVN8 264 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 VSIG2Q96IQ7 327 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 IGLV5-45A0A087WSX0 123 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 TRAV8-3A0A0A6YYJ7 113 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 A0A0J9YXY3 114 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 TRBV6-4A0A1B0GX49 114 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GAGE12JA6NER3 117 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 INAFM1C9JVW0 142 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GAGE4Q13068 117 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GAGE5Q13069 117 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GAGE13Q4V321 117 aa8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 GEMIN7Q9H840 131 aaKnown RBP8.12□□□□□ -1.11
SLC28A1-204ENST00000538177 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 CFC1P0CG37 223 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 LINC00694P0DN24 101 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 GTSF1LQ9H1H1 148 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 TMEM238C9JI98 176 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 APOMO95445 188 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 INSL3P51460 131 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 FAM19A3Q7Z5A8 133 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
SLC28A1-204ENST00000538177 K7ERU9 68 aa8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 TSPAN13O95857 204 aa8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 C2CD3Q4AC94 2353 aa8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 FN1P02751 2386 aaKnown RBP8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 SPINK8P0C7L1 97 aa8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 SMAGPQ0VAQ4 97 aa8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 LITAFQ99732 161 aa8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 CDKN2A-AS1Q9UH64 79 aa8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 NDUFA12Q9UI09 145 aa8.1□□□□□ -1.11
SLC28A1-204ENST00000538177 F8W1H4 67 aa8.09□□□□□ -1.11
SLC28A1-204ENST00000538177 FHL2Q14192 279 aa8.09□□□□□ -1.11
SLC28A1-204ENST00000538177 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
SLC28A1-204ENST00000538177 TRGV4A0A0C4DH28 118 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 A4D1N5 150 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 H3BMG7 143 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 HERVK_113P63121 156 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 RPL24P83731 157 aaKnown RBP8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 ZFAND6Q6FIF0 208 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 MUSTN1Q8IVN3 82 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 TMEM243Q9BU79 118 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 CDC42SE2Q9NRR3 84 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 COX6A2Q02221 97 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 KIR2DL5BQ8NHK3 375 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
SLC28A1-204ENST00000538177 OTOGQ6ZRI0 2925 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 LOC100131303A0A0U1RQF7 123 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 A8MZ25 164 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 H7C423 109 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 TMEM101Q96IK0 257 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 A0A0B4J2C4 111 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 CRLF1O75462 422 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 RNF151Q2KHN1 245 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 SPATA3Q8NHX4 192 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 SPANXDQ9BXN6 97 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
SLC28A1-204ENST00000538177 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 SMIM9A6NGZ8 99 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 G3V4G9 280 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 TIMM17BO60830 172 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 WFDC2Q14508 124 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 ADAMTSL4-AS1Q5T5F5 129 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 X6R8D5 127 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 NSD1Q96L73 2696 aaPredicted RBP8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 LOC107984156A0A0G2JMH3 177 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 UBE2L6O14933 153 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 NDUFA1O15239 70 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 IGHV3-33P01772 117 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 ARL17AQ8IVW1 177 aa8.05□□□□□ -1.12
SLC28A1-204ENST00000538177 TRAV13-1A0A0B4J241 112 aa8.04□□□□□ -1.12
SLC28A1-204ENST00000538177 MIAQ16674 131 aa8.04□□□□□ -1.12
SLC28A1-204ENST00000538177 CITED1Q99966 193 aa8.04□□□□□ -1.12
SLC28A1-204ENST00000538177 TRBV6-8A0A0A6YYG3 113 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 SMIM1B2RUZ4 78 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 PRSS2P07478 247 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 DEFB130BP0DP73 79 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 DEFB130AP0DP74 79 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 SFTA2Q6UW10 78 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 RNF183Q96D59 192 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 TRBV20-1A0A075B6N2 111 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 F5H768 121 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 VPS25Q9BRG1 176 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
SLC28A1-204ENST00000538177 TEX48A0A1B0GUV7 120 aa8.02□□□□□ -1.13
SLC28A1-204ENST00000538177 PSMB2P49721 201 aa8.02□□□□□ -1.13
SLC28A1-204ENST00000538177 IFITM1P13164 125 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms