RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 INSP01308 110 aa10.72□□□□□ -0.69
SSH3-210ENST00000532881 FN1P02751 2386 aaKnown RBP10.71□□□□□ -0.69
SSH3-210ENST00000532881 C9JAW5 83 aa10.71□□□□□ -0.69
SSH3-210ENST00000532881 J3QR89 54 aa10.71□□□□□ -0.69
SSH3-210ENST00000532881 STHQ8IWL8 128 aa10.71□□□□□ -0.69
SSH3-210ENST00000532881 ERG28Q9UKR5 140 aa10.71□□□□□ -0.69
SSH3-210ENST00000532881 PDZD2O15018 2839 aa10.71□□□□□ -0.7
SSH3-210ENST00000532881 IGHV1-58A0A0C4DH39 117 aa10.71□□□□□ -0.7
SSH3-210ENST00000532881 ANKRD29Q8N6D5 301 aa10.71□□□□□ -0.7
SSH3-210ENST00000532881 CITED2Q99967 270 aaPredicted RBP10.71□□□□□ -0.7
SSH3-210ENST00000532881 ANK3Q12955 4377 aaKnown RBP10.7□□□□□ -0.7
SSH3-210ENST00000532881 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
SSH3-210ENST00000532881 SPATA25Q9BR10 227 aa10.7□□□□□ -0.7
SSH3-210ENST00000532881 CDIP1Q9H305 208 aa10.7□□□□□ -0.7
SSH3-210ENST00000532881 GEMIN7Q9H840 131 aaKnown RBP10.69□□□□□ -0.7
SSH3-210ENST00000532881 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 CCL24O00175 119 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 DGAT2L7PQ6IED9 249 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 LOC100131303A0A0U1RQF7 123 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 GAGE12JA6NER3 117 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 RS1O15537 224 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 TRIAP1O43715 76 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 GAGE4Q13068 117 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 GAGE5Q13069 117 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 NTM-AS1Q6ZSK4 140 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 EDA2RQ9HAV5 297 aa10.68□□□□□ -0.7
SSH3-210ENST00000532881 NOP10Q9NPE3 64 aaKnown RBP10.68□□□□□ -0.7
SSH3-210ENST00000532881 TINCRA0A1B0GVN0 87 aa10.67□□□□□ -0.7
SSH3-210ENST00000532881 MT-ATP8P03928 68 aa10.67□□□□□ -0.7
SSH3-210ENST00000532881 RPL35AP18077 110 aaKnown RBP10.67□□□□□ -0.7
SSH3-210ENST00000532881 GCN1Q92616 2671 aaKnown RBP10.67□□□□□ -0.7
SSH3-210ENST00000532881 SLC25A20O43772 301 aa10.67□□□□□ -0.7
SSH3-210ENST00000532881 BEAN1Q3B7T3 259 aa10.67□□□□□ -0.7
SSH3-210ENST00000532881 TEN1Q86WV5 123 aa10.67□□□□□ -0.7
SSH3-210ENST00000532881 TMEM101Q96IK0 257 aa10.67□□□□□ -0.7
SSH3-210ENST00000532881 VWFP04275 2813 aa10.66□□□□□ -0.7
SSH3-210ENST00000532881 SPANXA1Q9NS26 97 aa10.66□□□□□ -0.7
SSH3-210ENST00000532881 TRBV20-1A0A075B6N2 111 aa10.65□□□□□ -0.7
SSH3-210ENST00000532881 A0A0B4J2C4 111 aa10.65□□□□□ -0.7
SSH3-210ENST00000532881 XGP55808 180 aa10.65□□□□□ -0.7
SSH3-210ENST00000532881 CLEC2BQ92478 149 aa10.65□□□□□ -0.7
SSH3-210ENST00000532881 IGKV3OR2-268A0A0C4DH90 116 aa10.64□□□□□ -0.71
SSH3-210ENST00000532881 GIG44P09565 113 aaPredicted RBP10.64□□□□□ -0.71
SSH3-210ENST00000532881 LINC00242Q5T6M2 205 aa10.64□□□□□ -0.71
SSH3-210ENST00000532881 GAGE7O76087 117 aa10.63□□□□□ -0.71
SSH3-210ENST00000532881 GAGE12FP0CL80 117 aa10.63□□□□□ -0.71
SSH3-210ENST00000532881 GAGE12GP0CL81 117 aa10.63□□□□□ -0.71
SSH3-210ENST00000532881 GAGE12IP0CL82 117 aa10.63□□□□□ -0.71
SSH3-210ENST00000532881 LYRM7Q5U5X0 104 aa10.63□□□□□ -0.71
SSH3-210ENST00000532881 PPDPFLQ8WWR9 84 aa10.63□□□□□ -0.71
SSH3-210ENST00000532881 Q9H8V8 135 aa10.63□□□□□ -0.71
SSH3-210ENST00000532881 TEX49A0A1B0GTD5 131 aa10.62□□□□□ -0.71
SSH3-210ENST00000532881 MIAQ16674 131 aa10.62□□□□□ -0.71
SSH3-210ENST00000532881 SBSPONQ8IVN8 264 aa10.62□□□□□ -0.71
SSH3-210ENST00000532881 NTN5Q8WTR8 489 aaPredicted RBP10.62□□□□□ -0.71
SSH3-210ENST00000532881 ZFAND6Q6FIF0 208 aa10.62□□□□□ -0.71
SSH3-210ENST00000532881 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.61□□□□□ -0.71
SSH3-210ENST00000532881 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
SSH3-210ENST00000532881 LINC01620Q4KN68 170 aa10.61□□□□□ -0.71
SSH3-210ENST00000532881 LINC01006Q8NI28 216 aa10.61□□□□□ -0.71
SSH3-210ENST00000532881 ICOSQ9Y6W8 199 aa10.61□□□□□ -0.71
SSH3-210ENST00000532881 HELZ2Q9BYK8 2649 aaKnown RBP10.6□□□□□ -0.71
SSH3-210ENST00000532881 K7EQD1 137 aa10.6□□□□□ -0.71
SSH3-210ENST00000532881 LRRC75A-AS1Q8N1F1 130 aa10.6□□□□□ -0.71
SSH3-210ENST00000532881 DNAJC30Q96LL9 226 aa10.6□□□□□ -0.71
SSH3-210ENST00000532881 CRYBA4P53673 196 aa10.59□□□□□ -0.71
SSH3-210ENST00000532881 IL17DQ8TAD2 202 aa10.59□□□□□ -0.71
SSH3-210ENST00000532881 SMR3AQ99954 134 aa10.59□□□□□ -0.71
SSH3-210ENST00000532881 FASNP49327 2511 aaKnown RBP10.59□□□□□ -0.71
SSH3-210ENST00000532881 RPL13AP40429 203 aaKnown RBP10.59□□□□□ -0.71
SSH3-210ENST00000532881 PIK3CD-AS1Q5SR53 167 aa10.59□□□□□ -0.71
SSH3-210ENST00000532881 SPANXDQ9BXN6 97 aa10.59□□□□□ -0.71
SSH3-210ENST00000532881 YAE1D1Q9NRH1 226 aa10.59□□□□□ -0.71
SSH3-210ENST00000532881 SPANXCQ9NY87 97 aa10.59□□□□□ -0.71
SSH3-210ENST00000532881 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
SSH3-210ENST00000532881 PLAC8L1A1L4L8 177 aa10.58□□□□□ -0.72
SSH3-210ENST00000532881 RPL36AP83881 106 aaKnown RBP10.58□□□□□ -0.72
SSH3-210ENST00000532881 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
SSH3-210ENST00000532881 RPL36ALQ969Q0 106 aaKnown RBP10.58□□□□□ -0.72
SSH3-210ENST00000532881 NOTCH2Q04721 2471 aa10.58□□□□□ -0.72
SSH3-210ENST00000532881 SMIM1B2RUZ4 78 aa10.57□□□□□ -0.72
SSH3-210ENST00000532881 ATXN8Q156A1 80 aa10.57□□□□□ -0.72
SSH3-210ENST00000532881 KRTAP1-1Q07627 177 aa10.57□□□□□ -0.72
SSH3-210ENST00000532881 TRBV30A0A0K0K1B3 111 aa10.56□□□□□ -0.72
SSH3-210ENST00000532881 TIRAPP58753 221 aa10.56□□□□□ -0.72
SSH3-210ENST00000532881 CDC42SE2Q9NRR3 84 aa10.56□□□□□ -0.72
SSH3-210ENST00000532881 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
SSH3-210ENST00000532881 H7C423 109 aa10.55□□□□□ -0.72
SSH3-210ENST00000532881 NDUFA1O15239 70 aa10.55□□□□□ -0.72
SSH3-210ENST00000532881 GAGE6Q13070 117 aa10.55□□□□□ -0.72
SSH3-210ENST00000532881 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
SSH3-210ENST00000532881 PRIMA1Q86XR5 153 aa10.54□□□□□ -0.72
SSH3-210ENST00000532881 TRAV4A0A0B4J268 109 aa10.54□□□□□ -0.72
SSH3-210ENST00000532881 MEIG1Q5JSS6 88 aa10.54□□□□□ -0.72
SSH3-210ENST00000532881 C19orf73Q9NVV2 129 aa10.54□□□□□ -0.72
SSH3-210ENST00000532881 UNC79Q9P2D8 2635 aa10.54□□□□□ -0.72
SSH3-210ENST00000532881 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
SSH3-210ENST00000532881 CRLF1O75462 422 aa10.53□□□□□ -0.72
SSH3-210ENST00000532881 CKS1BP61024 79 aa10.53□□□□□ -0.72
SSH3-210ENST00000532881 HERVK_113P63121 156 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms