RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 HIST2H2BDQ6DRA6 164 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 RANBP2P49792 3224 aaKnown RBP11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 ACYP1P07311 99 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 HAMPP81172 84 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 MRAPQ8TCY5 172 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 SPANXB1Q9NS25 103 aaPredicted RBP11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 TSHBP01222 138 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 CLEC2BQ92478 149 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 SMIM9A6NGZ8 99 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 G3V4G9 280 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 PTH2Q96A98 100 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 KLK12Q9UKR0 248 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 PKD1L2Q7Z442 2459 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 PCSK5Q92824 1860 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 TCL1BO95988 128 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 FAM222AQ5U5X8 452 aa11.3□□□□□ -0.6
PCDHA3-202ENST00000532566 EDN2P20800 178 aa11.29□□□□□ -0.6
PCDHA3-202ENST00000532566 C9orf153Q5TBE3 101 aa11.29□□□□□ -0.6
PCDHA3-202ENST00000532566 TRBV6-4A0A1B0GX49 114 aa11.28□□□□□ -0.6
PCDHA3-202ENST00000532566 KRTAP10-9P60411 292 aa11.28□□□□□ -0.6
PCDHA3-202ENST00000532566 NDUFA1O15239 70 aa11.27□□□□□ -0.6
PCDHA3-202ENST00000532566 TIRAPP58753 221 aa11.27□□□□□ -0.6
PCDHA3-202ENST00000532566 ZNF580Q9UK33 172 aa11.27□□□□□ -0.61
PCDHA3-202ENST00000532566 LYRM9A8MSI8 78 aa11.27□□□□□ -0.61
PCDHA3-202ENST00000532566 H7C423 109 aa11.26□□□□□ -0.61
PCDHA3-202ENST00000532566 INAFM1C9JVW0 142 aa11.26□□□□□ -0.61
PCDHA3-202ENST00000532566 PRM2P04554 102 aa11.26□□□□□ -0.61
PCDHA3-202ENST00000532566 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
PCDHA3-202ENST00000532566 LECT2O14960 151 aa11.26□□□□□ -0.61
PCDHA3-202ENST00000532566 CCL18P55774 89 aa11.26□□□□□ -0.61
PCDHA3-202ENST00000532566 TRAV26-1A0A087WT03 109 aa11.25□□□□□ -0.61
PCDHA3-202ENST00000532566 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
PCDHA3-202ENST00000532566 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
PCDHA3-202ENST00000532566 BPTFQ12830 3046 aa11.25□□□□□ -0.61
PCDHA3-202ENST00000532566 TRBV6-8A0A0A6YYG3 113 aa11.24□□□□□ -0.61
PCDHA3-202ENST00000532566 A0A096LNJ9 63 aa11.24□□□□□ -0.61
PCDHA3-202ENST00000532566 HILS1P60008 231 aa11.23□□□□□ -0.61
PCDHA3-202ENST00000532566 IGIPA6NJ69 53 aa11.23□□□□□ -0.61
PCDHA3-202ENST00000532566 LINC00269Q8N2A0 174 aa11.23□□□□□ -0.61
PCDHA3-202ENST00000532566 WFDC10AQ9H1F0 79 aa11.23□□□□□ -0.61
PCDHA3-202ENST00000532566 ODF3L2Q3SX64 289 aa11.22□□□□□ -0.61
PCDHA3-202ENST00000532566 LINC00482Q8N8I6 264 aa11.22□□□□□ -0.61
PCDHA3-202ENST00000532566 LINC00308Q8TCZ7 52 aa11.22□□□□□ -0.61
PCDHA3-202ENST00000532566 REG3AQ06141 175 aa11.21□□□□□ -0.61
PCDHA3-202ENST00000532566 UBE2D4Q9Y2X8 147 aa11.21□□□□□ -0.61
PCDHA3-202ENST00000532566 RPL18AQ02543 176 aaKnown RBP11.21□□□□□ -0.62
PCDHA3-202ENST00000532566 NCR3O14931 201 aa11.2□□□□□ -0.62
PCDHA3-202ENST00000532566 CITED1Q99966 193 aa11.2□□□□□ -0.62
PCDHA3-202ENST00000532566 ANKRD17O75179 2603 aaKnown RBP11.19□□□□□ -0.62
PCDHA3-202ENST00000532566 A8MZ25 164 aa11.19□□□□□ -0.62
PCDHA3-202ENST00000532566 LY6G6DO95868 133 aa11.19□□□□□ -0.62
PCDHA3-202ENST00000532566 MRPS36P82909 103 aaKnown RBP11.19□□□□□ -0.62
PCDHA3-202ENST00000532566 CHCHD10Q8WYQ3 142 aaPredicted RBP11.18□□□□□ -0.62
PCDHA3-202ENST00000532566 MKI67P46013 3256 aaKnown RBP11.18□□□□□ -0.62
PCDHA3-202ENST00000532566 ETDCA0A1B0GVM5 59 aa11.18□□□□□ -0.62
PCDHA3-202ENST00000532566 IBA57-AS1B1ANH7 110 aa11.18□□□□□ -0.62
PCDHA3-202ENST00000532566 JMJD7-PLA2G4BH0Y9G9 81 aa11.18□□□□□ -0.62
PCDHA3-202ENST00000532566 MIFP14174 115 aa11.18□□□□□ -0.62
PCDHA3-202ENST00000532566 TRIAP1O43715 76 aa11.17□□□□□ -0.62
PCDHA3-202ENST00000532566 TIMM17BO60830 172 aa11.17□□□□□ -0.62
PCDHA3-202ENST00000532566 TRANK1O15050 2925 aa11.17□□□□□ -0.62
PCDHA3-202ENST00000532566 PTPRBP23467 1997 aa11.17□□□□□ -0.62
PCDHA3-202ENST00000532566 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
PCDHA3-202ENST00000532566 IGLV2-18A0A075B6J9 118 aa11.17□□□□□ -0.62
PCDHA3-202ENST00000532566 ACANP16112 2415 aa11.17□□□□□ -0.62
PCDHA3-202ENST00000532566 RBX1P62877 108 aa11.16□□□□□ -0.62
PCDHA3-202ENST00000532566 DEFB105AQ8NG35 78 aa11.16□□□□□ -0.62
PCDHA3-202ENST00000532566 CDK2AP2O75956 126 aa11.16□□□□□ -0.62
PCDHA3-202ENST00000532566 UBE2BP63146 152 aa11.16□□□□□ -0.62
PCDHA3-202ENST00000532566 BBC3Q96PG8 261 aaPredicted RBP11.16□□□□□ -0.62
PCDHA3-202ENST00000532566 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
PCDHA3-202ENST00000532566 DIRC1Q969H9 104 aa11.15□□□□□ -0.62
PCDHA3-202ENST00000532566 UBE2D1P51668 147 aa11.15□□□□□ -0.62
PCDHA3-202ENST00000532566 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
PCDHA3-202ENST00000532566 LOC100131303A0A0U1RQF7 123 aa11.15□□□□□ -0.62
PCDHA3-202ENST00000532566 H3BQ85 93 aa11.14□□□□□ -0.63
PCDHA3-202ENST00000532566 UBE2D3P61077 147 aa11.14□□□□□ -0.63
PCDHA3-202ENST00000532566 UBE2D2P62837 147 aa11.14□□□□□ -0.63
PCDHA3-202ENST00000532566 C11orf45Q8TAV5 145 aa11.14□□□□□ -0.63
PCDHA3-202ENST00000532566 IGKV3D-7A0A0C4DH55 119 aa11.13□□□□□ -0.63
PCDHA3-202ENST00000532566 TEX49A0A1B0GTD5 131 aa11.13□□□□□ -0.63
PCDHA3-202ENST00000532566 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
PCDHA3-202ENST00000532566 AGRNO00468 2067 aa11.12□□□□□ -0.63
PCDHA3-202ENST00000532566 IGLV4-69A0A075B6H9 119 aa11.12□□□□□ -0.63
PCDHA3-202ENST00000532566 B5MCH6 92 aa11.12□□□□□ -0.63
PCDHA3-202ENST00000532566 LAMA3Q16787 3333 aa11.12□□□□□ -0.63
PCDHA3-202ENST00000532566 PLA2G2AP14555 144 aa11.12□□□□□ -0.63
PCDHA3-202ENST00000532566 HIGD2BQ4VC39 106 aa11.12□□□□□ -0.63
PCDHA3-202ENST00000532566 IGHV4-28A0A0C4DH34 117 aa11.11□□□□□ -0.63
PCDHA3-202ENST00000532566 FAM236AA0A1B0GUQ0 79 aa11.11□□□□□ -0.63
PCDHA3-202ENST00000532566 FAM236BA0A1B0GV22 79 aa11.11□□□□□ -0.63
PCDHA3-202ENST00000532566 NDUFA7O95182 113 aa11.11□□□□□ -0.63
PCDHA3-202ENST00000532566 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
PCDHA3-202ENST00000532566 FUSP35637 526 aaKnown RBP eCLIP11.11□□□□□ -0.63
PCDHA3-202ENST00000532566 KIR2DL5BQ8NHK3 375 aa11.11□□□□□ -0.63
PCDHA3-202ENST00000532566 CDC42SE2Q9NRR3 84 aa11.11□□□□□ -0.63
PCDHA3-202ENST00000532566 TRACP01848 142 aa11.1□□□□□ -0.63
PCDHA3-202ENST00000532566 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
PCDHA3-202ENST00000532566 RBM3P98179 157 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms