RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 ANKRD17O75179 2603 aaKnown RBP0.52□□□□□ -2.33
BRCA2-203ENST00000528762 TENM3Q9P273 2699 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 ATP5EP56381 51 aaPredicted RBP0.52□□□□□ -2.33
BRCA2-203ENST00000528762 SVBPQ8N300 66 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 SMR3AQ99954 134 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 TCEAL7Q9BRU2 100 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 LINC00472Q9H8W2 130 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 ZNF292O60281 2723 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 SCAPERQ9BY12 1400 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 ARHGEF5Q12774 1597 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 TOPAZ1Q8N9V7 1692 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 SPTBN2O15020 2390 aa0.52□□□□□ -2.33
BRCA2-203ENST00000528762 TMEM262E9PQX1 116 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 H3BQ15 152 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 RBP2P50120 134 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 COX6A2Q02221 97 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 CFAP126Q5VTH2 177 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 NAV2Q8IVL1 2488 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 UBE2DNLQ8IWF7 75 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 ABCA3Q99758 1704 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 DYNLRB1Q9NP97 96 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 CDC42SE2Q9NRR3 84 aa0.51□□□□□ -2.33
BRCA2-203ENST00000528762 CHD1O14646 1710 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 KDM5AP29375 1690 aaKnown RBP0.5□□□□□ -2.33
BRCA2-203ENST00000528762 COL4A6Q14031 1691 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 ARHGAP5Q13017 1502 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 C10orf142B7Z368 130 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 HMGN4O00479 90 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 SPINK6Q6UWN8 80 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 GTF2H5Q6ZYL4 71 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 FAM213BQ8TBF2 198 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 IGF2RP11717 2491 aa0.5□□□□□ -2.33
BRCA2-203ENST00000528762 TOP2BQ02880 1626 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 GOLGA4Q13439 2230 aaKnown RBP0.49□□□□□ -2.33
BRCA2-203ENST00000528762 ABCC5O15440 1437 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 TRAV30A0A087WSZ9 112 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 TRAV22A0A0B4J277 110 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 CTXND1A0A1B0GTU2 59 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 IGLC7A0M8Q6 106 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 PIN1P1O15428 100 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 MYOZ3Q8TDC0 251 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 SMIM4Q8WVI0 70 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 FAM167A-AS1Q96KT0 104 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 LINC01558Q9Y6Z2 57 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 BTAF1O14981 1849 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 LAMC1P11047 1609 aa0.49□□□□□ -2.33
BRCA2-203ENST00000528762 HMGXB3Q12766 1538 aa0.48□□□□□ -2.33
BRCA2-203ENST00000528762 TMEM218A2RU14 115 aa0.48□□□□□ -2.33
BRCA2-203ENST00000528762 NPVFQ9HCQ7 196 aa0.48□□□□□ -2.33
BRCA2-203ENST00000528762 OTOGQ6ZRI0 2925 aa0.48□□□□□ -2.33
BRCA2-203ENST00000528762 SYNE1Q8NF91 8797 aaKnown RBP0.48□□□□□ -2.33
BRCA2-203ENST00000528762 PTPRZ1P23471 2315 aaPredicted RBP0.48□□□□□ -2.33
BRCA2-203ENST00000528762 SCN7AQ01118 1682 aa0.47□□□□□ -2.33
BRCA2-203ENST00000528762 F8VRH5 84 aa0.47□□□□□ -2.33
BRCA2-203ENST00000528762 CHKB-CPT1BH3BT56 60 aa0.47□□□□□ -2.33
BRCA2-203ENST00000528762 UBE2D3P61077 147 aa0.47□□□□□ -2.33
BRCA2-203ENST00000528762 GNG11P61952 73 aa0.47□□□□□ -2.33
BRCA2-203ENST00000528762 UBE2D2P62837 147 aa0.47□□□□□ -2.33
BRCA2-203ENST00000528762 COX17Q14061 63 aa0.47□□□□□ -2.33
BRCA2-203ENST00000528762 KMT2DO14686 5537 aa0.47□□□□□ -2.33
BRCA2-203ENST00000528762 ZFYVE26Q68DK2 2539 aa0.46□□□□□ -2.34
BRCA2-203ENST00000528762 LRP6O75581 1613 aa0.46□□□□□ -2.34
BRCA2-203ENST00000528762 Q0VG73 95 aa0.46□□□□□ -2.34
BRCA2-203ENST00000528762 BAGE2Q86Y30 109 aa0.46□□□□□ -2.34
BRCA2-203ENST00000528762 RAPGEF6Q8TEU7 1601 aa0.46□□□□□ -2.34
BRCA2-203ENST00000528762 DIP2CQ9Y2E4 1556 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 LOC285095A0A1B0GVY8 99 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 hADV29S1A0JD25 119 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 ZNF815PA8K554 130 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 UQCR11O14957 56 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 MPC2O95563 127 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 APOC3P02656 99 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 SSBP3-AS1Q7Z2R9 100 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 ACBD7Q8N6N7 88 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 SPRR4Q96PI1 79 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 MRC2Q9UBG0 1479 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 SHANK2Q9UPX8 1470 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 VPS8Q8N3P4 1428 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 BIVM-ERCC5R4GMW8 1640 aa0.45□□□□□ -2.34
BRCA2-203ENST00000528762 NUP188Q5SRE5 1749 aa0.44□□□□□ -2.34
BRCA2-203ENST00000528762 SNCAP37840 140 aa0.44□□□□□ -2.34
BRCA2-203ENST00000528762 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
BRCA2-203ENST00000528762 UQCR10Q9UDW1 63 aa0.44□□□□□ -2.34
BRCA2-203ENST00000528762 LRP1Q07954 4544 aaKnown RBP0.44□□□□□ -2.34
BRCA2-203ENST00000528762 CNTLNQ9NXG0 1405 aa0.44□□□□□ -2.34
BRCA2-203ENST00000528762 DOPEY2Q9Y3R5 2298 aa0.44□□□□□ -2.34
BRCA2-203ENST00000528762 GPR98Q8WXG9 6306 aa0.44□□□□□ -2.34
BRCA2-203ENST00000528762 EHBP1L1Q8N3D4 1523 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 NAP1L6A6NFF2 107 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 SFT2D2O95562 160 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 MT-ATP8P03928 68 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 TMEM170BQ5T4T1 132 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 DNAJC13O75165 2243 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 USF3Q68DE3 2245 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 ERCC6L2Q5T890 1561 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 CSMD3Q7Z407 3707 aa0.43□□□□□ -2.34
BRCA2-203ENST00000528762 PDCD11Q14690 1871 aaKnown RBP0.42□□□□□ -2.34
BRCA2-203ENST00000528762 HAMPP81172 84 aa0.42□□□□□ -2.34
BRCA2-203ENST00000528762 NCMAPQ5T1S8 102 aa0.42□□□□□ -2.34
BRCA2-203ENST00000528762 CNFNQ9BYD5 112 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms