RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 Q6ZRN7 208 aaPredicted RBP0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 TMEM263Q8WUH6 116 aaKnown RBP0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 PLAC4Q8WY50 150 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 AMELXQ99217 191 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 WFDC6Q9BQY6 131 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 PROK2Q9HC23 129 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 CDC42SE2Q9NRR3 84 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 CRIPTQ9P021 101 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 PRO0255Q9UI72 69 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 UBE2D4Q9Y2X8 147 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 SLX4Q8IY92 1834 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 COL4A2P08572 1712 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 WDR90Q96KV7 1748 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 SCRIBQ14160 1630 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 ABCC3O15438 1527 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 ERICH3Q5RHP9 1530 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 ABCC2Q92887 1545 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 DISP1Q96F81 1524 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 PTPRMP28827 1452 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 CCDC141Q6ZP82 1450 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 MAGI2Q86UL8 1455 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 LCTP09848 1927 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 FLG2Q5D862 2391 aaPredicted RBP0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 NYNRINQ9P2P1 1898 aaKnown RBP0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 TNS1Q9HBL0 1735 aaKnown RBP0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 MARF1Q9Y4F3 1742 aaKnown RBP0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 LOC110117498A0A087WWA1 95 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 A0A087WWC5 75 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 LOC730098B7Z3J9 87 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 NDUFA4O00483 81 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 PIN1P1O15428 100 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 C3orf79P0CE67 100 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 LYNX1P0DP58 116 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 COX6A2Q02221 97 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 PRB3Q04118 309 aaPredicted RBP0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 Q5BKY6 102 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 ENHOQ6UWT2 76 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 LINC00575Q6W349 94 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 USMG5Q96IX5 58 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 Q96NJ1 140 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 NMES1Q9C002 83 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 ABRACLQ9P1F3 81 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 APLNQ9ULZ1 77 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 USP54Q70EL1 1684 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 KIF21AQ7Z4S6 1674 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 ROBO1Q9Y6N7 1651 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 TRPM6Q9BX84 2022 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 UNC13BO14795 1591 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 LAMC3Q9Y6N6 1575 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 DENND4CQ5VZ89 1909 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 ALPK3Q96L96 1907 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 ANAPC1Q9H1A4 1944 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 NEXMIFQ5QGS0 1516 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 UGGT2Q9NYU1 1516 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 DCAF1Q9Y4B6 1507 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 ATP7BP35670 1465 aa0.48□□□□□ -2.33
ECHDC1-219ENST00000526299 BLMP54132 1417 aaPredicted RBP0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 EEA1Q15075 1411 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 STRCQ7RTU9 1775 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 CASZ1Q86V15 1759 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 KIDINS220Q9ULH0 1771 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 COL24A1Q17RW2 1714 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 SPHKAPQ2M3C7 1700 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 MON2Q7Z3U7 1717 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 NWD2Q9ULI1 1742 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 RREB1Q92766 1687 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 ZFC3H1O60293 1989 aaKnown RBP0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 KDM6BO15054 1643 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 KIF14Q15058 1648 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 NCKAP5O14513 1909 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 GVQW2A0A096LPI5 108 aaPredicted RBP0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 TRBV7-4A0A0J9YYF1 115 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 CPSF4LA6NMK7 179 aaKnown RBP0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 M0R2N4 97 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 MRPL33O75394 65 aaKnown RBP0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 IFI6P09912 130 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 COX7BP24311 80 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 SERF2P84101 59 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 RTTNQ86VV8 2226 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 ADGRB1O14514 1584 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 PLXNA2O75051 1894 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 CPAMD8Q8IZJ3 1885 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 ABCC1P33527 1531 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 PRDM15P57071 1507 aaPredicted RBP0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 MAP3K1Q13233 1512 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 EHBP1L1Q8N3D4 1523 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 FOCADQ5VW36 1801 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 KIAA2026Q5HYC2 2103 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 BCORL1Q5H9F3 1711 aa0.47□□□□□ -2.33
ECHDC1-219ENST00000526299 TANC2Q9HCD6 1990 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 CLTCQ00610 1675 aaKnown RBP0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 MYH1P12882 1939 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 PTPRSQ13332 1948 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 TRPM1Q7Z4N2 1603 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 MPDZO75970 2070 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 MDC1Q14676 2089 aaKnown RBP0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 A0A087WTM6 91 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 A0A096LNT2 108 aa0.46□□□□□ -2.34
ECHDC1-219ENST00000526299 M0R1W7 72 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms