RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	OXLD1	Q5BKU9	147 aa		11.78	□□□□□ -0.52
FAM49B-223	ENST00000522746	IGHV3-64	A0A075B6Q5	118 aa		11.78	□□□□□ -0.52
FAM49B-223	ENST00000522746	KIR2DL5B	Q8NHK3	375 aa		11.78	□□□□□ -0.52
FAM49B-223	ENST00000522746	COL6A5	A8TX70	2615 aa		11.78	□□□□□ -0.52
FAM49B-223	ENST00000522746	HIST1H4G	Q99525	98 aa		11.77	□□□□□ -0.53
FAM49B-223	ENST00000522746	TM2D2	Q9BX73	214 aa		11.77	□□□□□ -0.53
FAM49B-223	ENST00000522746	SMIM9	A6NGZ8	99 aa		11.77	□□□□□ -0.53
FAM49B-223	ENST00000522746	LINC00612	Q8N6U2	182 aa		11.77	□□□□□ -0.53
FAM49B-223	ENST00000522746		J3QQQ9	107 aa		11.76	□□□□□ -0.53
FAM49B-223	ENST00000522746	WIPF1	O43516	503 aa		11.76	□□□□□ -0.53
FAM49B-223	ENST00000522746	TAL2	Q16559	108 aa		11.76	□□□□□ -0.53
FAM49B-223	ENST00000522746	DGAT2L7P	Q6IED9	249 aa		11.76	□□□□□ -0.53
FAM49B-223	ENST00000522746	SCGB1D4	Q6XE38	83 aa		11.76	□□□□□ -0.53
FAM49B-223	ENST00000522746	TIMM21	Q9BVV7	248 aa		11.76	□□□□□ -0.53
FAM49B-223	ENST00000522746		H3BRM9	83 aa		11.75	□□□□□ -0.53
FAM49B-223	ENST00000522746	PTTG1IP	P53801	180 aa		11.75	□□□□□ -0.53
FAM49B-223	ENST00000522746	APOC4	P55056	127 aa		11.75	□□□□□ -0.53
FAM49B-223	ENST00000522746	SBSPON	Q8IVN8	264 aa		11.75	□□□□□ -0.53
FAM49B-223	ENST00000522746	RAB37	Q96AX2	223 aa		11.75	□□□□□ -0.53
FAM49B-223	ENST00000522746	LEPROT	O15243	131 aa		11.75	□□□□□ -0.53
FAM49B-223	ENST00000522746	DEFB4A	O15263	64 aa		11.75	□□□□□ -0.53
FAM49B-223	ENST00000522746	VAMP3	Q15836	100 aa		11.75	□□□□□ -0.53
FAM49B-223	ENST00000522746		K7ERJ3	54 aa		11.74	□□□□□ -0.53
FAM49B-223	ENST00000522746	LGALS3	P17931	250 aa	Known RBP	11.74	□□□□□ -0.53
FAM49B-223	ENST00000522746	UBE2D1	P51668	147 aa		11.74	□□□□□ -0.53
FAM49B-223	ENST00000522746	NAA38	Q9BRA0	125 aa	Known RBP	11.74	□□□□□ -0.53
FAM49B-223	ENST00000522746	GTSF1L	Q9H1H1	148 aa		11.74	□□□□□ -0.53
FAM49B-223	ENST00000522746	TINCR	A0A1B0GVN0	87 aa		11.73	□□□□□ -0.53
FAM49B-223	ENST00000522746	FAM222A	Q5U5X8	452 aa		11.73	□□□□□ -0.53
FAM49B-223	ENST00000522746		A0A0J9YY99	117 aa		11.72	□□□□□ -0.53
FAM49B-223	ENST00000522746	IGHV4-30-4	P0DP06	118 aa		11.72	□□□□□ -0.53
FAM49B-223	ENST00000522746	KRTAP10-11	P60412	298 aa		11.72	□□□□□ -0.53
FAM49B-223	ENST00000522746	NHP2	Q9NX24	153 aa	Known RBP	11.72	□□□□□ -0.53
FAM49B-223	ENST00000522746	TRAV8-3	A0A0A6YYJ7	113 aa		11.72	□□□□□ -0.53
FAM49B-223	ENST00000522746	CCL25	O15444	150 aa		11.72	□□□□□ -0.53
FAM49B-223	ENST00000522746	AMMECR1L	Q6DCA0	310 aa		11.72	□□□□□ -0.53
FAM49B-223	ENST00000522746	IGHV4-28	A0A0C4DH34	117 aa		11.71	□□□□□ -0.53
FAM49B-223	ENST00000522746	C9orf118	A6NHY6	69 aa		11.71	□□□□□ -0.53
FAM49B-223	ENST00000522746	SMIM13	P0DJ93	91 aa		11.71	□□□□□ -0.53
FAM49B-223	ENST00000522746	UBE2V1	Q13404	147 aa		11.71	□□□□□ -0.53
FAM49B-223	ENST00000522746	TMEM243	Q9BU79	118 aa		11.71	□□□□□ -0.53
FAM49B-223	ENST00000522746		H3BUT2	72 aa		11.71	□□□□□ -0.54
FAM49B-223	ENST00000522746	CSDC2	Q9Y534	153 aa	Known RBP	11.71	□□□□□ -0.54
FAM49B-223	ENST00000522746	IGHV3-30-3	P0DP02	117 aa		11.7	□□□□□ -0.54
FAM49B-223	ENST00000522746	UBE2L6	O14933	153 aa		11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	SPINK8	P0C7L1	97 aa		11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	SHISA2	Q6UWI4	295 aa		11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	GEMIN7	Q9H840	131 aa	Known RBP	11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	LYRM9	A8MSI8	78 aa		11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	COX6A2	Q02221	97 aa		11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	OR5A1	Q8NGJ0	315 aa		11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	CDC42SE2	Q9NRR3	84 aa		11.69	□□□□□ -0.54
FAM49B-223	ENST00000522746	CDKN2A-AS1	Q9UH64	79 aa		11.68	□□□□□ -0.54
FAM49B-223	ENST00000522746	IGHV1-58	A0A0C4DH39	117 aa		11.68	□□□□□ -0.54
FAM49B-223	ENST00000522746		A8MZ25	164 aa		11.68	□□□□□ -0.54
FAM49B-223	ENST00000522746	GYPE	P15421	78 aa		11.68	□□□□□ -0.54
FAM49B-223	ENST00000522746		Q8NAQ8	132 aa		11.68	□□□□□ -0.54
FAM49B-223	ENST00000522746	TRBV6-8	A0A0A6YYG3	113 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	C12orf74	Q32Q52	190 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	LINC00242	Q5T6M2	205 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	TRAV13-1	A0A0B4J241	112 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	TIRAP	P58753	221 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	GAGE6	Q13070	117 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	C10orf126	Q8N4M7	172 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	VSIG2	Q96IQ7	327 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	CELA1	Q9UNI1	258 aa		11.67	□□□□□ -0.54
FAM49B-223	ENST00000522746	IGLV5-45	A0A087WSX0	123 aa		11.66	□□□□□ -0.54
FAM49B-223	ENST00000522746	RNF183	Q96D59	192 aa		11.66	□□□□□ -0.54
FAM49B-223	ENST00000522746	SMAGP	Q0VAQ4	97 aa		11.65	□□□□□ -0.54
FAM49B-223	ENST00000522746	TMEM101	Q96IK0	257 aa		11.65	□□□□□ -0.54
FAM49B-223	ENST00000522746	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.65	□□□□□ -0.54
FAM49B-223	ENST00000522746	PRO0255	Q9UI72	69 aa		11.65	□□□□□ -0.54
FAM49B-223	ENST00000522746	MIF	P14174	115 aa		11.65	□□□□□ -0.54
FAM49B-223	ENST00000522746		G3V4G9	280 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746		H7C423	109 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746	ATP6V0E2	Q8NHE4	81 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746	CHCHD5	Q9BSY4	110 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746	ANK2	Q01484	3957 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746	IGHV3-30	P01768	117 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746	IGHV3-30-5	P0DP03	117 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746	HERVK_113	P63121	156 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746	FAM19A3	Q7Z5A8	133 aa		11.64	□□□□□ -0.55
FAM49B-223	ENST00000522746		A0A096LPF7	62 aa		11.63	□□□□□ -0.55
FAM49B-223	ENST00000522746		A0A1W2PPM0	123 aa		11.63	□□□□□ -0.55
FAM49B-223	ENST00000522746	DAD1	P61803	113 aa		11.63	□□□□□ -0.55
FAM49B-223	ENST00000522746	SAMD5	Q5TGI4	173 aa		11.63	□□□□□ -0.55
FAM49B-223	ENST00000522746	IGLV4-60	A0A075B6I1	120 aa		11.62	□□□□□ -0.55
FAM49B-223	ENST00000522746		A0A0J9YXY3	114 aa		11.62	□□□□□ -0.55
FAM49B-223	ENST00000522746		A0A1B0GWB2	263 aa		11.62	□□□□□ -0.55
FAM49B-223	ENST00000522746	NOTCH1	P46531	2555 aa		11.62	□□□□□ -0.55
FAM49B-223	ENST00000522746	PAX4	O43316	350 aa		11.62	□□□□□ -0.55
FAM49B-223	ENST00000522746	NDUFA12	Q9UI09	145 aa		11.62	□□□□□ -0.55
FAM49B-223	ENST00000522746	DNAH3	Q8TD57	4116 aa		11.61	□□□□□ -0.55
FAM49B-223	ENST00000522746	IGLL5	B9A064	214 aa		11.61	□□□□□ -0.55
FAM49B-223	ENST00000522746	GAGE10	A6NGK3	116 aa		11.6	□□□□□ -0.55
FAM49B-223	ENST00000522746	EGFEM1P	Q0D2K5	195 aa		11.6	□□□□□ -0.55
FAM49B-223	ENST00000522746	TMEM238L	A0A1B0GVL6	79 aa		11.6	□□□□□ -0.55
FAM49B-223	ENST00000522746		A6NJY4	79 aa		11.6	□□□□□ -0.55
FAM49B-223	ENST00000522746	ZFAND6	Q6FIF0	208 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms