RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 C19orf73Q9NVV2 129 aa6.68□□□□□ -1.34
PROM1-215ENST00000513448 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
PROM1-215ENST00000513448 IGHV3-38A0A0C4DH36 116 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 LOC107984156A0A0G2JMH3 177 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 GIG44P09565 113 aaPredicted RBP6.67□□□□□ -1.34
PROM1-215ENST00000513448 MUSTN1Q8IVN3 82 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 ARL17AQ8IVW1 177 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
PROM1-215ENST00000513448 IGHV3-64A0A075B6Q5 118 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 TRBV6-4A0A1B0GX49 114 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 ADARB2-AS1A8MUL3 147 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 IGHV3-33P01772 117 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 IFITM1P13164 125 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 HIST2H2BDQ6DRA6 164 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 Q6ZTI0 123 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 LITAFQ99732 161 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
PROM1-215ENST00000513448 FLNAP21333 2647 aaKnown RBP6.67□□□□□ -1.34
PROM1-215ENST00000513448 SONP18583 2426 aaKnown RBP6.66□□□□□ -1.34
PROM1-215ENST00000513448 TRAV8-3A0A0A6YYJ7 113 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 CSNK1G2-AS1Q8NCQ2 148 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 NOP10Q9NPE3 64 aaKnown RBP6.66□□□□□ -1.34
PROM1-215ENST00000513448 CHD6Q8TD26 2715 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 PLAC8L1A1L4L8 177 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 M0QXV9 152 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 PSMB2P49721 201 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 MIAQ16674 131 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 SBSPONQ8IVN8 264 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 COPS9Q8WXC6 57 aa6.66□□□□□ -1.34
PROM1-215ENST00000513448 IGLV5-39A0A0G2JS06 123 aa6.65□□□□□ -1.35
PROM1-215ENST00000513448 NDUFA1O15239 70 aa6.65□□□□□ -1.35
PROM1-215ENST00000513448 SCGB1C2P0DMR2 95 aa6.65□□□□□ -1.35
PROM1-215ENST00000513448 CIRBPQ14011 172 aaKnown RBP6.65□□□□□ -1.35
PROM1-215ENST00000513448 RNASE13Q5GAN3 156 aaKnown RBP6.65□□□□□ -1.35
PROM1-215ENST00000513448 HIST2H2BCQ6DN03 193 aa6.65□□□□□ -1.35
PROM1-215ENST00000513448 CDKN2A-AS1Q9UH64 79 aa6.65□□□□□ -1.35
PROM1-215ENST00000513448 PDZD2O15018 2839 aa6.65□□□□□ -1.35
PROM1-215ENST00000513448 CCDC168Q8NDH2 2452 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 TRGV2A0A075B6R0 118 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 SPINK8P0C7L1 97 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 TRBV30A0A0K0K1B3 111 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 TCL1BO95988 128 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 LINC00242Q5T6M2 205 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 TMEM101Q96IK0 257 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 TMEM243Q9BU79 118 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 PPDPFQ9H3Y8 114 aa6.64□□□□□ -1.35
PROM1-215ENST00000513448 UBE2L6O14933 153 aa6.63□□□□□ -1.35
PROM1-215ENST00000513448 PRSS2P07478 247 aa6.63□□□□□ -1.35
PROM1-215ENST00000513448 INSL3P51460 131 aa6.63□□□□□ -1.35
PROM1-215ENST00000513448 SH2D6Q7Z4S9 175 aa6.63□□□□□ -1.35
PROM1-215ENST00000513448 WNK1Q9H4A3 2382 aa6.63□□□□□ -1.35
PROM1-215ENST00000513448 GAGE12JA6NER3 117 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 RPL35AP18077 110 aaKnown RBP6.62□□□□□ -1.35
PROM1-215ENST00000513448 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
PROM1-215ENST00000513448 FOXI1Q12951 378 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 GAGE4Q13068 117 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 GAGE5Q13069 117 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 LINC01600Q96MT4 127 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
PROM1-215ENST00000513448 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 HERV-K104P63124 156 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 TEN1Q86WV5 123 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 KIR2DL5BQ8NHK3 375 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
PROM1-215ENST00000513448 TRGV4A0A0C4DH28 118 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 GAGE7O76087 117 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 PF4P02776 101 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 COX6CP09669 75 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 GAGE12FP0CL80 117 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 GAGE12GP0CL81 117 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 GAGE12IP0CL82 117 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 COX6A2Q02221 97 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 ATXN8Q156A1 80 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.61□□□□□ -1.35
PROM1-215ENST00000513448 TENM4Q6N022 2769 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 NF1P21359 2839 aa6.61□□□□□ -1.35
PROM1-215ENST00000513448 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 SMIM1B2RUZ4 78 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 SFTA2Q6UW10 78 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 LINC00482Q8N8I6 264 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 PPDPFLQ8WWR9 84 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 WFDC10AQ9H1F0 79 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 SCGB1A1P11684 91 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 FHL2Q14192 279 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 Q1RN00 199 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 LINC00612Q8N6U2 182 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 SIGMAR1Q99720 223 aa6.6□□□□□ -1.35
PROM1-215ENST00000513448 TRAV13-1A0A0B4J241 112 aa6.59□□□□□ -1.35
PROM1-215ENST00000513448 Q9H8V8 135 aa6.59□□□□□ -1.35
PROM1-215ENST00000513448 CUBNO60494 3623 aa6.59□□□□□ -1.36
PROM1-215ENST00000513448 TRBV6-8A0A0A6YYG3 113 aa6.59□□□□□ -1.36
PROM1-215ENST00000513448 A8MZ25 164 aa6.59□□□□□ -1.36
PROM1-215ENST00000513448 F5H768 121 aa6.59□□□□□ -1.36
PROM1-215ENST00000513448 SLC25A20O43772 301 aa6.59□□□□□ -1.36
PROM1-215ENST00000513448 MTURNQ8N3F0 131 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms