RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 LYRM9A8MSI8 78 aa9.65□□□□□ -0.87
PCDHA4-202ENST00000512229 POLR2KP53803 58 aaKnown RBP9.65□□□□□ -0.87
PCDHA4-202ENST00000512229 IGLL5B9A064 214 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 IGHV3-30P01768 117 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 IGHV3-33P01772 117 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 IGHV3-30-5P0DP03 117 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 CCL18P55774 89 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 LINC00467Q9BRT7 94 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 SOCS3O14543 225 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 CCL25O15444 150 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 CFAP47Q6ZTR5 3102 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 DMXL2Q8TDJ6 3036 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 A0A1B0GV72 72 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 RS1O15537 224 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 RPL32P62910 135 aaKnown RBP9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
PCDHA4-202ENST00000512229 IGLV4-3A0A075B6K6 122 aa9.63□□□□□ -0.87
PCDHA4-202ENST00000512229 TRAV26-1A0A087WT03 109 aa9.63□□□□□ -0.87
PCDHA4-202ENST00000512229 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.63□□□□□ -0.87
PCDHA4-202ENST00000512229 KLK12Q9UKR0 248 aa9.63□□□□□ -0.87
PCDHA4-202ENST00000512229 LOC400499M0QZD8 3231 aa9.63□□□□□ -0.87
PCDHA4-202ENST00000512229 TRBV6-4A0A1B0GX49 114 aa9.62□□□□□ -0.87
PCDHA4-202ENST00000512229 CRYBA4P53673 196 aa9.62□□□□□ -0.87
PCDHA4-202ENST00000512229 DAND5Q8N907 189 aa9.62□□□□□ -0.87
PCDHA4-202ENST00000512229 TAX1BP3O14907 124 aa9.62□□□□□ -0.87
PCDHA4-202ENST00000512229 NKAPP1Q8N9T2 125 aa9.61□□□□□ -0.87
PCDHA4-202ENST00000512229 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
PCDHA4-202ENST00000512229 URB1-AS1Q96HZ7 61 aa9.61□□□□□ -0.87
PCDHA4-202ENST00000512229 EDA2RQ9HAV5 297 aa9.61□□□□□ -0.87
PCDHA4-202ENST00000512229 CDKN2A-AS1Q9UH64 79 aa9.61□□□□□ -0.87
PCDHA4-202ENST00000512229 IGLV1-51P01701 117 aa9.61□□□□□ -0.87
PCDHA4-202ENST00000512229 CFAP46Q8IYW2 2715 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 IGKV2D-26A0A0A0MRZ7 120 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 MIFP14174 115 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 DMXL1Q9Y485 3027 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 TP73-AS1Q9UF72 201 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 ZZEF1O43149 2961 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 CAMK2N2Q96S95 79 aa9.6□□□□□ -0.87
PCDHA4-202ENST00000512229 ZNF22P17026 224 aaPredicted RBP9.59□□□□□ -0.87
PCDHA4-202ENST00000512229 GAGE2BQ13066 116 aa9.59□□□□□ -0.87
PCDHA4-202ENST00000512229 GAGE2EQ4V326 116 aa9.59□□□□□ -0.87
PCDHA4-202ENST00000512229 C16orf95Q9H693 158 aa9.59□□□□□ -0.87
PCDHA4-202ENST00000512229 GAGE2DQ9UEU5 116 aa9.59□□□□□ -0.87
PCDHA4-202ENST00000512229 TSHBP01222 138 aa9.59□□□□□ -0.87
PCDHA4-202ENST00000512229 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
PCDHA4-202ENST00000512229 INAFM2P0DMQ5 153 aa9.58□□□□□ -0.88
PCDHA4-202ENST00000512229 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
PCDHA4-202ENST00000512229 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
PCDHA4-202ENST00000512229 C11orf45Q8TAV5 145 aa9.58□□□□□ -0.88
PCDHA4-202ENST00000512229 TRBV6-8A0A0A6YYG3 113 aa9.58□□□□□ -0.88
PCDHA4-202ENST00000512229 CARD19Q96LW7 228 aa9.58□□□□□ -0.88
PCDHA4-202ENST00000512229 KIR2DL5BQ8NHK3 375 aa9.57□□□□□ -0.88
PCDHA4-202ENST00000512229 SPAG11BQ08648 103 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 ADGRG4Q8IZF6 3080 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 GAGE2AQ6NT46 116 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 MIR7-3HGQ8N6C7 128 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 MAPKAPK5-AS1Q8N8E1 139 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 Q8N976 141 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 A0A0J9YXY3 114 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 H7C423 109 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 Q8N2B8 174 aa9.56□□□□□ -0.88
PCDHA4-202ENST00000512229 COL27A1Q8IZC6 1860 aaPredicted RBP9.55□□□□□ -0.88
PCDHA4-202ENST00000512229 FLNAP21333 2647 aaKnown RBP9.55□□□□□ -0.88
PCDHA4-202ENST00000512229 CXCL5P42830 114 aa9.55□□□□□ -0.88
PCDHA4-202ENST00000512229 COL12A1Q99715 3063 aa9.55□□□□□ -0.88
PCDHA4-202ENST00000512229 IGHV4-28A0A0C4DH34 117 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 OXLD1Q5BKU9 147 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 NTN5Q8WTR8 489 aaPredicted RBP9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 WDFY3Q8IZQ1 3526 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 FAM110AQ9BQ89 295 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 NDUFA1O15239 70 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 C1orf158Q8N1D5 194 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 TM2D2Q9BX73 214 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 ITPR3Q14573 2671 aa9.54□□□□□ -0.88
PCDHA4-202ENST00000512229 ATMQ13315 3056 aa9.53□□□□□ -0.88
PCDHA4-202ENST00000512229 TIRAPP58753 221 aa9.53□□□□□ -0.88
PCDHA4-202ENST00000512229 REG3AQ06141 175 aa9.53□□□□□ -0.88
PCDHA4-202ENST00000512229 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
PCDHA4-202ENST00000512229 DEFB131BA0A096LNP1 70 aa9.53□□□□□ -0.88
PCDHA4-202ENST00000512229 ZFAND6Q6FIF0 208 aa9.52□□□□□ -0.89
PCDHA4-202ENST00000512229 LOC100131303A0A0U1RQF7 123 aa9.52□□□□□ -0.89
PCDHA4-202ENST00000512229 IGIPA6NJ69 53 aa9.52□□□□□ -0.89
PCDHA4-202ENST00000512229 H0YGX0 51 aa9.52□□□□□ -0.89
PCDHA4-202ENST00000512229 MIAQ16674 131 aa9.52□□□□□ -0.89
PCDHA4-202ENST00000512229 F8WEM9 126 aa9.51□□□□□ -0.89
PCDHA4-202ENST00000512229 RBX1P62877 108 aa9.51□□□□□ -0.89
PCDHA4-202ENST00000512229 GAGE12HA6NDE8 117 aa9.51□□□□□ -0.89
PCDHA4-202ENST00000512229 BAALC-AS2P0C853 105 aa9.51□□□□□ -0.89
PCDHA4-202ENST00000512229 IGHV4-30-4P0DP06 118 aa9.5□□□□□ -0.89
PCDHA4-202ENST00000512229 WFDC2Q14508 124 aa9.5□□□□□ -0.89
PCDHA4-202ENST00000512229 ANKRD29Q8N6D5 301 aa9.5□□□□□ -0.89
PCDHA4-202ENST00000512229 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
PCDHA4-202ENST00000512229 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
PCDHA4-202ENST00000512229 CHCHD10Q8WYQ3 142 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms