RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 HIVEP1P15822 2718 aa10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 TRGV2A0A075B6R0 118 aa10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 TMEM238LA0A1B0GVL6 79 aa10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 A6NJY4 79 aa10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 SRSF9Q13242 221 aaKnown RBP eCLIP10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 RNASE13Q5GAN3 156 aaKnown RBP10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 LINC00612Q8N6U2 182 aa10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 CITED1Q99966 193 aa10.54□□□□□ -0.72
SNCAIP-216ENST00000512146 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
SNCAIP-216ENST00000512146 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
SNCAIP-216ENST00000512146 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
SNCAIP-216ENST00000512146 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
SNCAIP-216ENST00000512146 TIRAPP58753 221 aa10.53□□□□□ -0.72
SNCAIP-216ENST00000512146 SPCS1Q9Y6A9 102 aa10.53□□□□□ -0.72
SNCAIP-216ENST00000512146 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
SNCAIP-216ENST00000512146 GAGE12JA6NER3 117 aa10.52□□□□□ -0.73
SNCAIP-216ENST00000512146 GAGE4Q13068 117 aa10.52□□□□□ -0.73
SNCAIP-216ENST00000512146 GAGE5Q13069 117 aa10.52□□□□□ -0.73
SNCAIP-216ENST00000512146 GAGE13Q4V321 117 aa10.52□□□□□ -0.73
SNCAIP-216ENST00000512146 FAM19A3Q7Z5A8 133 aa10.52□□□□□ -0.73
SNCAIP-216ENST00000512146 KIR2DL5BQ8NHK3 375 aa10.52□□□□□ -0.73
SNCAIP-216ENST00000512146 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
SNCAIP-216ENST00000512146 FHL2Q14192 279 aa10.51□□□□□ -0.73
SNCAIP-216ENST00000512146 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
SNCAIP-216ENST00000512146 C10orf126Q8N4M7 172 aa10.51□□□□□ -0.73
SNCAIP-216ENST00000512146 VSIG2Q96IQ7 327 aa10.51□□□□□ -0.73
SNCAIP-216ENST00000512146 SMIM9A6NGZ8 99 aa10.5□□□□□ -0.73
SNCAIP-216ENST00000512146 SMAGPQ0VAQ4 97 aa10.5□□□□□ -0.73
SNCAIP-216ENST00000512146 DGAT2L7PQ6IED9 249 aa10.5□□□□□ -0.73
SNCAIP-216ENST00000512146 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
SNCAIP-216ENST00000512146 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.49□□□□□ -0.73
SNCAIP-216ENST00000512146 X6R8D5 127 aa10.49□□□□□ -0.73
SNCAIP-216ENST00000512146 TRAV8-3A0A0A6YYJ7 113 aa10.49□□□□□ -0.73
SNCAIP-216ENST00000512146 H7C423 109 aa10.49□□□□□ -0.73
SNCAIP-216ENST00000512146 GEMIN7Q9H840 131 aaKnown RBP10.49□□□□□ -0.73
SNCAIP-216ENST00000512146 TRGV4A0A0C4DH28 118 aa10.48□□□□□ -0.73
SNCAIP-216ENST00000512146 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
SNCAIP-216ENST00000512146 WFDC9Q8NEX5 89 aa10.48□□□□□ -0.73
SNCAIP-216ENST00000512146 CDC42SE2Q9NRR3 84 aa10.48□□□□□ -0.73
SNCAIP-216ENST00000512146 VWFP04275 2813 aa10.48□□□□□ -0.73
SNCAIP-216ENST00000512146 LOC100131303A0A0U1RQF7 123 aa10.47□□□□□ -0.73
SNCAIP-216ENST00000512146 LINC00242Q5T6M2 205 aa10.47□□□□□ -0.73
SNCAIP-216ENST00000512146 TMEM243Q9BU79 118 aa10.47□□□□□ -0.73
SNCAIP-216ENST00000512146 CDKN2A-AS1Q9UH64 79 aa10.47□□□□□ -0.73
SNCAIP-216ENST00000512146 WIPF1O43516 503 aa10.47□□□□□ -0.73
SNCAIP-216ENST00000512146 HERVK_113P63121 156 aa10.47□□□□□ -0.73
SNCAIP-216ENST00000512146 LITAFQ99732 161 aa10.47□□□□□ -0.73
SNCAIP-216ENST00000512146 TMEM238C9JI98 176 aa10.46□□□□□ -0.74
SNCAIP-216ENST00000512146 ZFAND6Q6FIF0 208 aa10.46□□□□□ -0.74
SNCAIP-216ENST00000512146 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
SNCAIP-216ENST00000512146 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
SNCAIP-216ENST00000512146 CFC1BP0CG36 223 aa10.45□□□□□ -0.74
SNCAIP-216ENST00000512146 CFC1P0CG37 223 aa10.45□□□□□ -0.74
SNCAIP-216ENST00000512146 NDUFA12Q9UI09 145 aa10.45□□□□□ -0.74
SNCAIP-216ENST00000512146 TENM1Q9UKZ4 2725 aa10.45□□□□□ -0.74
SNCAIP-216ENST00000512146 COX6A2Q02221 97 aa10.44□□□□□ -0.74
SNCAIP-216ENST00000512146 PGPEP1Q9NXJ5 209 aa10.44□□□□□ -0.74
SNCAIP-216ENST00000512146 TMEM101Q96IK0 257 aa10.44□□□□□ -0.74
SNCAIP-216ENST00000512146 TRBV6-8A0A0A6YYG3 113 aa10.43□□□□□ -0.74
SNCAIP-216ENST00000512146 OCIAD2Q56VL3 154 aa10.43□□□□□ -0.74
SNCAIP-216ENST00000512146 TIMM17BO60830 172 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 TSPAN13O95857 204 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 DEFB130BP0DP73 79 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 DEFB130AP0DP74 79 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 SPANXDQ9BXN6 97 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 SPANXCQ9NY87 97 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 A4D1N5 150 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 LYRM9A8MSI8 78 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 A8MZ25 164 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 UBE2L6O14933 153 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 APOMO95445 188 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 APOC4P55056 127 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 MUSTN1Q8IVN3 82 aa10.42□□□□□ -0.74
SNCAIP-216ENST00000512146 NDUFA1O15239 70 aa10.41□□□□□ -0.74
SNCAIP-216ENST00000512146 TRAV13-1A0A0B4J241 112 aa10.4□□□□□ -0.74
SNCAIP-216ENST00000512146 A0A0B4J2C4 111 aa10.4□□□□□ -0.74
SNCAIP-216ENST00000512146 SMIM1B2RUZ4 78 aa10.4□□□□□ -0.74
SNCAIP-216ENST00000512146 F5H768 121 aa10.4□□□□□ -0.74
SNCAIP-216ENST00000512146 EIF4EBP3O60516 100 aaPredicted RBP10.4□□□□□ -0.74
SNCAIP-216ENST00000512146 RBX1P62877 108 aa10.4□□□□□ -0.74
SNCAIP-216ENST00000512146 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
SNCAIP-216ENST00000512146 ADAMTSL4-AS1Q5T5F5 129 aa10.4□□□□□ -0.75
SNCAIP-216ENST00000512146 RNF183Q96D59 192 aa10.4□□□□□ -0.75
SNCAIP-216ENST00000512146 F8W1H4 67 aa10.39□□□□□ -0.75
SNCAIP-216ENST00000512146 MIAQ16674 131 aa10.39□□□□□ -0.75
SNCAIP-216ENST00000512146 PRO0255Q9UI72 69 aa10.39□□□□□ -0.75
SNCAIP-216ENST00000512146 ATRQ13535 2644 aa10.39□□□□□ -0.75
SNCAIP-216ENST00000512146 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
SNCAIP-216ENST00000512146 FAM222AQ5U5X8 452 aa10.38□□□□□ -0.75
SNCAIP-216ENST00000512146 TEP1Q99973 2627 aaKnown RBP10.38□□□□□ -0.75
SNCAIP-216ENST00000512146 H3BMG7 143 aa10.37□□□□□ -0.75
SNCAIP-216ENST00000512146 DEFB135Q30KP9 77 aa10.37□□□□□ -0.75
SNCAIP-216ENST00000512146 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
SNCAIP-216ENST00000512146 GAGE6Q13070 117 aa10.37□□□□□ -0.75
SNCAIP-216ENST00000512146 ATP6V0E2Q8NHE4 81 aa10.37□□□□□ -0.75
SNCAIP-216ENST00000512146 PRO0461Q9UI25 63 aa10.37□□□□□ -0.75
SNCAIP-216ENST00000512146 K7ERU9 68 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms