RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 AMMECR1LQ6DCA0 310 aa10.54□□□□□ -0.72
PHF3-209ENST00000509330 OVOL2Q9BRP0 275 aa10.54□□□□□ -0.72
PHF3-209ENST00000509330 A6NDN8 102 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 FHL2Q14192 279 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 TRAV13-1A0A0B4J241 112 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 CEND1Q8N111 149 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 AMELXQ99217 191 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 HIGD1BQ9P298 99 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 J3QQQ9 107 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
PHF3-209ENST00000509330 LGALS3P17931 250 aaKnown RBP10.53□□□□□ -0.72
PHF3-209ENST00000509330 TRBV10-1A0A0K0K1A3 114 aa10.52□□□□□ -0.73
PHF3-209ENST00000509330 IGHV4-30-4P0DP06 118 aa10.52□□□□□ -0.73
PHF3-209ENST00000509330 NFE4Q86UQ8 179 aa10.52□□□□□ -0.73
PHF3-209ENST00000509330 TMEM223A0PJW6 202 aa10.52□□□□□ -0.73
PHF3-209ENST00000509330 CCL25O15444 150 aa10.52□□□□□ -0.73
PHF3-209ENST00000509330 SRSF9Q13242 221 aaKnown RBP eCLIP10.52□□□□□ -0.73
PHF3-209ENST00000509330 C3orf56Q8N813 242 aa10.52□□□□□ -0.73
PHF3-209ENST00000509330 SPANXA1Q9NS26 97 aa10.52□□□□□ -0.73
PHF3-209ENST00000509330 A0A0J9YY99 117 aa10.51□□□□□ -0.73
PHF3-209ENST00000509330 GAGE6Q13070 117 aa10.51□□□□□ -0.73
PHF3-209ENST00000509330 DAZ4Q86SG3 579 aaKnown RBP10.51□□□□□ -0.73
PHF3-209ENST00000509330 DAZ3Q9NR90 486 aaKnown RBP10.51□□□□□ -0.73
PHF3-209ENST00000509330 UBE2L6O14933 153 aa10.5□□□□□ -0.73
PHF3-209ENST00000509330 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
PHF3-209ENST00000509330 HTN3P15516 51 aa10.5□□□□□ -0.73
PHF3-209ENST00000509330 GEMIN7Q9H840 131 aaKnown RBP10.5□□□□□ -0.73
PHF3-209ENST00000509330 TRBV6-4A0A1B0GX49 114 aa10.49□□□□□ -0.73
PHF3-209ENST00000509330 COX6A2Q02221 97 aa10.49□□□□□ -0.73
PHF3-209ENST00000509330 GYPEP15421 78 aa10.49□□□□□ -0.73
PHF3-209ENST00000509330 WFDC9Q8NEX5 89 aa10.49□□□□□ -0.73
PHF3-209ENST00000509330 TIMM21Q9BVV7 248 aa10.49□□□□□ -0.73
PHF3-209ENST00000509330 CDKN2A-AS1Q9UH64 79 aa10.49□□□□□ -0.73
PHF3-209ENST00000509330 CELA1Q9UNI1 258 aa10.49□□□□□ -0.73
PHF3-209ENST00000509330 APOC4P55056 127 aa10.48□□□□□ -0.73
PHF3-209ENST00000509330 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
PHF3-209ENST00000509330 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
PHF3-209ENST00000509330 IGHV3-30-3P0DP02 117 aa10.48□□□□□ -0.73
PHF3-209ENST00000509330 CHCHD5Q9BSY4 110 aa10.48□□□□□ -0.73
PHF3-209ENST00000509330 RETNQ9HD89 108 aa10.48□□□□□ -0.73
PHF3-209ENST00000509330 SFTA2Q6UW10 78 aa10.47□□□□□ -0.73
PHF3-209ENST00000509330 PRIMA1Q86XR5 153 aa10.47□□□□□ -0.73
PHF3-209ENST00000509330 TMEM243Q9BU79 118 aa10.47□□□□□ -0.73
PHF3-209ENST00000509330 H3BRM9 83 aa10.47□□□□□ -0.73
PHF3-209ENST00000509330 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
PHF3-209ENST00000509330 UBE2D1P51668 147 aa10.47□□□□□ -0.73
PHF3-209ENST00000509330 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
PHF3-209ENST00000509330 OR5A1Q8NGJ0 315 aa10.47□□□□□ -0.73
PHF3-209ENST00000509330 LEPROTO15243 131 aa10.46□□□□□ -0.73
PHF3-209ENST00000509330 TM2D2Q9BX73 214 aa10.46□□□□□ -0.73
PHF3-209ENST00000509330 NPC2P61916 151 aa10.46□□□□□ -0.74
PHF3-209ENST00000509330 C9orf118A6NHY6 69 aa10.45□□□□□ -0.74
PHF3-209ENST00000509330 APOMO95445 188 aa10.45□□□□□ -0.74
PHF3-209ENST00000509330 KIR2DL5BQ8NHK3 375 aa10.45□□□□□ -0.74
PHF3-209ENST00000509330 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 TINCRA0A1B0GVN0 87 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 C10orf126Q8N4M7 172 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
PHF3-209ENST00000509330 C12orf74Q32Q52 190 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 SBSPONQ8IVN8 264 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
PHF3-209ENST00000509330 CMYA5Q8N3K9 4069 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 A0A0U1RRA0 63 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 DAD1P61803 113 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 LINC00242Q5T6M2 205 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 CLPSL2Q6UWE3 100 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
PHF3-209ENST00000509330 TENM3Q9P273 2699 aa10.43□□□□□ -0.74
PHF3-209ENST00000509330 TMEM262E9PQX1 116 aa10.43□□□□□ -0.74
PHF3-209ENST00000509330 TRBV6-8A0A0A6YYG3 113 aa10.43□□□□□ -0.74
PHF3-209ENST00000509330 CRYBA4P53673 196 aa10.43□□□□□ -0.74
PHF3-209ENST00000509330 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
PHF3-209ENST00000509330 SMIM9A6NGZ8 99 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 PAX4O43316 350 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 IGHV1-58A0A0C4DH39 117 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 GAGE10A6NGK3 116 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 F5H768 121 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 SAMD5Q5TGI4 173 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 Q8NAQ8 132 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 ATP6V0E2Q8NHE4 81 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 NBEAL1Q6ZS30 2694 aa10.42□□□□□ -0.74
PHF3-209ENST00000509330 G3V4G9 280 aa10.41□□□□□ -0.74
PHF3-209ENST00000509330 DAND5Q8N907 189 aa10.41□□□□□ -0.74
PHF3-209ENST00000509330 NDUFA12Q9UI09 145 aa10.41□□□□□ -0.74
PHF3-209ENST00000509330 TRAV26-1A0A087WT03 109 aa10.41□□□□□ -0.74
PHF3-209ENST00000509330 TAL2Q16559 108 aa10.41□□□□□ -0.74
PHF3-209ENST00000509330 VSIG2Q96IQ7 327 aa10.41□□□□□ -0.74
PHF3-209ENST00000509330 PRO0255Q9UI72 69 aa10.41□□□□□ -0.74
PHF3-209ENST00000509330 LINC00612Q8N6U2 182 aa10.41□□□□□ -0.74
PHF3-209ENST00000509330 A0A1W2PPM0 123 aa10.4□□□□□ -0.74
PHF3-209ENST00000509330 PRSS2P07478 247 aa10.4□□□□□ -0.74
PHF3-209ENST00000509330 Q8N3U1 123 aa10.4□□□□□ -0.74
PHF3-209ENST00000509330 GTSF1LQ9H1H1 148 aa10.4□□□□□ -0.74
PHF3-209ENST00000509330 A0A0J9YXY3 114 aa10.4□□□□□ -0.75
PHF3-209ENST00000509330 SPCS1Q9Y6A9 102 aa10.4□□□□□ -0.75
PHF3-209ENST00000509330 MGAM2Q2M2H8 2515 aa10.39□□□□□ -0.75
PHF3-209ENST00000509330 LYRM9A8MSI8 78 aa10.39□□□□□ -0.75
PHF3-209ENST00000509330 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
PHF3-209ENST00000509330 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms