RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
HTT-205ENST00000509043 Q9UF83 564 aa6.57□□□□□ -1.36
HTT-205ENST00000509043 SETXQ7Z333 2677 aaKnown RBP6.56□□□□□ -1.36
HTT-205ENST00000509043 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 GAGE12JA6NER3 117 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 UBE2L6O14933 153 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 FABP2P12104 132 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 GAGE4Q13068 117 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 GAGE5Q13069 117 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 AMMECR1LQ6DCA0 310 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 Q6ZUT4 128 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 Q6ZVH6 145 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
HTT-205ENST00000509043 X6R8D5 127 aa6.56□□□□□ -1.36
HTT-205ENST00000509043 TEX48A0A1B0GUV7 120 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 GAGE10A6NGK3 116 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 H3BUT2 72 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 CCL25O15444 150 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 IGHV3-30-3P0DP02 117 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 MIFP14174 115 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 C12orf74Q32Q52 190 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 SAMD5Q5TGI4 173 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 VSIG2Q96IQ7 327 aa6.55□□□□□ -1.36
HTT-205ENST00000509043 WNK1Q9H4A3 2382 aa6.54□□□□□ -1.36
HTT-205ENST00000509043 K7EP34 96 aa6.54□□□□□ -1.36
HTT-205ENST00000509043 TIMM17BO60830 172 aa6.54□□□□□ -1.36
HTT-205ENST00000509043 TSPEAR-AS2P59090 65 aa6.54□□□□□ -1.36
HTT-205ENST00000509043 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
HTT-205ENST00000509043 NTM-AS1Q6ZSK4 140 aa6.54□□□□□ -1.36
HTT-205ENST00000509043 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
HTT-205ENST00000509043 PRO0255Q9UI72 69 aa6.54□□□□□ -1.36
HTT-205ENST00000509043 NOTCH2Q04721 2471 aa6.54□□□□□ -1.36
HTT-205ENST00000509043 TRBV6-8A0A0A6YYG3 113 aa6.53□□□□□ -1.36
HTT-205ENST00000509043 K7EP13 123 aa6.53□□□□□ -1.36
HTT-205ENST00000509043 IGHV3-30P01768 117 aa6.53□□□□□ -1.36
HTT-205ENST00000509043 IGHV3-30-5P0DP03 117 aa6.53□□□□□ -1.36
HTT-205ENST00000509043 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
HTT-205ENST00000509043 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
HTT-205ENST00000509043 ZFAND6Q6FIF0 208 aa6.53□□□□□ -1.36
HTT-205ENST00000509043 RAB37Q96AX2 223 aa6.53□□□□□ -1.36
HTT-205ENST00000509043 RNF183Q96D59 192 aa6.53□□□□□ -1.36
HTT-205ENST00000509043 C2CD3Q4AC94 2353 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 SETD2Q9BYW2 2564 aaPredicted RBP6.52□□□□□ -1.37
HTT-205ENST00000509043 TRAV26-1A0A087WT03 109 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.52□□□□□ -1.37
HTT-205ENST00000509043 A0A0J9YXY3 114 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 A8MZ25 164 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 IGLL5B9A064 214 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 LINC00242Q5T6M2 205 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 SHISA2Q6UWI4 295 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 SH2D6Q7Z4S9 175 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 SPCS1Q9Y6A9 102 aa6.52□□□□□ -1.37
HTT-205ENST00000509043 FN1P02751 2386 aaKnown RBP6.52□□□□□ -1.37
HTT-205ENST00000509043 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 NDUFA1O15239 70 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 IFITM1P13164 125 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
HTT-205ENST00000509043 FAM222AQ5U5X8 452 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 ATP6V0E2Q8NHE4 81 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 SPANXDQ9BXN6 97 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 SPANXCQ9NY87 97 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 HIVEP1P15822 2718 aa6.51□□□□□ -1.37
HTT-205ENST00000509043 A0A1B0GUV1 79 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 K7ERJ3 54 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 SPART-AS1P0CW21 52 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 HERV-K104P63124 156 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 DEFB135Q30KP9 77 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
HTT-205ENST00000509043 SFTA2Q6UW10 78 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 C10orf126Q8N4M7 172 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 PPDPFQ9H3Y8 114 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 CDKN2A-AS1Q9UH64 79 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 CUBNO60494 3623 aa6.5□□□□□ -1.37
HTT-205ENST00000509043 A0A0B4J2C4 111 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 IGHV4-28A0A0C4DH34 117 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 LOC100131303A0A0U1RQF7 123 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 ATP5G1P05496 136 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 IGHV4-30-4P0DP06 118 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 GYPEP15421 78 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 DAD1P61803 113 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 Q8NAQ8 132 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 CHCHD5Q9BSY4 110 aa6.49□□□□□ -1.37
HTT-205ENST00000509043 IGHV3-64A0A075B6Q5 118 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 TRAV8-3A0A0A6YYJ7 113 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 SMIM1B2RUZ4 78 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 PAX4O43316 350 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 SPINK8P0C7L1 97 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 EGFEM1PQ0D2K5 195 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 MIAQ16674 131 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 LINC01561Q8N1V8 128 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 C3orf56Q8N813 242 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 SPATA3Q8NHX4 192 aa6.48□□□□□ -1.37
HTT-205ENST00000509043 PRO1854Q9UHT4 67 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms