RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 TEX48A0A1B0GUV7 120 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 GAGE12JA6NER3 117 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 H3BUT2 72 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 GAGE4Q13068 117 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 GAGE5Q13069 117 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 C12orf74Q32Q52 190 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 GAGE13Q4V321 117 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 SAMD5Q5TGI4 173 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 AKAP9Q99996 3911 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 IGHV3-38A0A0C4DH36 116 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 CCL25O15444 150 aa8.06□□□□□ -1.12
NFKB1-205ENST00000505458 LINC00694P0DN24 101 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 FHL2Q14192 279 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 DEFB104AQ8WTQ1 72 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 COPS9Q8WXC6 57 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 FAM104AQ969W3 186 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 TIMM17BO60830 172 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 ZNF469Q96JG9 3925 aaPredicted RBP8.05□□□□□ -1.12
NFKB1-205ENST00000505458 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 MIFP14174 115 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 RPL24P83731 157 aaKnown RBP8.05□□□□□ -1.12
NFKB1-205ENST00000505458 VSIG2Q96IQ7 327 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 C2CD3Q4AC94 2353 aa8.05□□□□□ -1.12
NFKB1-205ENST00000505458 X6R8D5 127 aa8.04□□□□□ -1.12
NFKB1-205ENST00000505458 NSD1Q96L73 2696 aaPredicted RBP8.04□□□□□ -1.12
NFKB1-205ENST00000505458 SETXQ7Z333 2677 aaKnown RBP8.04□□□□□ -1.12
NFKB1-205ENST00000505458 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.04□□□□□ -1.12
NFKB1-205ENST00000505458 TSPEAR-AS2P59090 65 aa8.04□□□□□ -1.12
NFKB1-205ENST00000505458 CBY1Q9Y3M2 126 aa8.04□□□□□ -1.12
NFKB1-205ENST00000505458 SPCS1Q9Y6A9 102 aa8.04□□□□□ -1.12
NFKB1-205ENST00000505458 A0A0J9YXY3 114 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 K7EP13 123 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 RAB37Q96AX2 223 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 ZFAND6Q6FIF0 208 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 IGLL5B9A064 214 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 RNF183Q96D59 192 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 Q9UF83 564 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 NOTCH2Q04721 2471 aa8.03□□□□□ -1.12
NFKB1-205ENST00000505458 SETD2Q9BYW2 2564 aaPredicted RBP8.02□□□□□ -1.13
NFKB1-205ENST00000505458 TRBV6-8A0A0A6YYG3 113 aa8.02□□□□□ -1.13
NFKB1-205ENST00000505458 IGHV3-30P01768 117 aa8.02□□□□□ -1.13
NFKB1-205ENST00000505458 IGHV3-30-5P0DP03 117 aa8.02□□□□□ -1.13
NFKB1-205ENST00000505458 CEMP1Q6PRD7 247 aaPredicted RBP8.02□□□□□ -1.13
NFKB1-205ENST00000505458 NTM-AS1Q6ZSK4 140 aa8.02□□□□□ -1.13
NFKB1-205ENST00000505458 SH2D6Q7Z4S9 175 aa8.02□□□□□ -1.13
NFKB1-205ENST00000505458 SPANXDQ9BXN6 97 aa8.02□□□□□ -1.13
NFKB1-205ENST00000505458 SPANXCQ9NY87 97 aa8.02□□□□□ -1.13
NFKB1-205ENST00000505458 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
NFKB1-205ENST00000505458 FN1P02751 2386 aaKnown RBP8.01□□□□□ -1.13
NFKB1-205ENST00000505458 IFITM1P13164 125 aa8.01□□□□□ -1.13
NFKB1-205ENST00000505458 CIRBPQ14011 172 aaKnown RBP8.01□□□□□ -1.13
NFKB1-205ENST00000505458 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
NFKB1-205ENST00000505458 NF1P21359 2839 aa8.01□□□□□ -1.13
NFKB1-205ENST00000505458 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
NFKB1-205ENST00000505458 NDUFA1O15239 70 aa8.01□□□□□ -1.13
NFKB1-205ENST00000505458 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
NFKB1-205ENST00000505458 TRAV26-1A0A087WT03 109 aa8□□□□□ -1.13
NFKB1-205ENST00000505458 A0A0B4J2C4 111 aa8□□□□□ -1.13
NFKB1-205ENST00000505458 HERV-K104P63124 156 aa8□□□□□ -1.13
NFKB1-205ENST00000505458 ATP6V0E2Q8NHE4 81 aa8□□□□□ -1.13
NFKB1-205ENST00000505458 DEFB130BP0DP73 79 aa8□□□□□ -1.13
NFKB1-205ENST00000505458 DEFB130AP0DP74 79 aa8□□□□□ -1.13
NFKB1-205ENST00000505458 LINC00242Q5T6M2 205 aa8□□□□□ -1.13
NFKB1-205ENST00000505458 SHISA2Q6UWI4 295 aa8□□□□□ -1.13
NFKB1-205ENST00000505458 K7ERJ3 54 aa7.99□□□□□ -1.13
NFKB1-205ENST00000505458 A8MZ25 164 aa7.99□□□□□ -1.13
NFKB1-205ENST00000505458 C10orf126Q8N4M7 172 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 CDKN2A-AS1Q9UH64 79 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 ATP5G1P05496 136 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 SPINK8P0C7L1 97 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 SPART-AS1P0CW21 52 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 DAD1P61803 113 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 RNASE13Q5GAN3 156 aaKnown RBP7.98□□□□□ -1.13
NFKB1-205ENST00000505458 FAM222AQ5U5X8 452 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 CHCHD5Q9BSY4 110 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 MIAQ16674 131 aa7.98□□□□□ -1.13
NFKB1-205ENST00000505458 GYPEP15421 78 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 DEFB135Q30KP9 77 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 LINC01561Q8N1V8 128 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 PGPEP1Q9NXJ5 209 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 PRO1854Q9UHT4 67 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 JMJD1CQ15652 2540 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 TRBV20-1A0A075B6N2 111 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 PAX4O43316 350 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 OTOGQ6ZRI0 2925 aa7.97□□□□□ -1.13
NFKB1-205ENST00000505458 IGHV3-64A0A075B6Q5 118 aa7.96□□□□□ -1.13
NFKB1-205ENST00000505458 IGHV4-28A0A0C4DH34 117 aa7.96□□□□□ -1.13
NFKB1-205ENST00000505458 TRAV8-3A0A0A6YYJ7 113 aa7.96□□□□□ -1.13
NFKB1-205ENST00000505458 F8W1H4 67 aa7.96□□□□□ -1.14
NFKB1-205ENST00000505458 K7ERU9 68 aa7.96□□□□□ -1.14
NFKB1-205ENST00000505458 TRAV13-1A0A0B4J241 112 aa7.95□□□□□ -1.14
NFKB1-205ENST00000505458 LOC100131303A0A0U1RQF7 123 aa7.95□□□□□ -1.14
NFKB1-205ENST00000505458 SMIM1B2RUZ4 78 aa7.95□□□□□ -1.14
NFKB1-205ENST00000505458 IGHV4-30-4P0DP06 118 aa7.95□□□□□ -1.14
NFKB1-205ENST00000505458 Q8NAQ8 132 aa7.95□□□□□ -1.14
NFKB1-205ENST00000505458 GAGE6Q13070 117 aa7.94□□□□□ -1.14
NFKB1-205ENST00000505458 APOMO95445 188 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms