RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 TRPM7Q96QT4 1865 aa1.64□□□□□ -2.15
TRAPPC13-205ENST00000504243 EFCAB5A4FU69 1503 aa1.64□□□□□ -2.15
TRAPPC13-205ENST00000504243 LAMB4A4D0S4 1761 aa1.64□□□□□ -2.15
TRAPPC13-205ENST00000504243 LTN1O94822 1766 aa1.64□□□□□ -2.15
TRAPPC13-205ENST00000504243 PTPRFP10586 1907 aa1.64□□□□□ -2.15
TRAPPC13-205ENST00000504243 BRWD1Q9NSI6 2320 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 ABCA12Q86UK0 2595 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 CUX1P39880 1505 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 TRBV25-1A0A075B6N4 114 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 A0A0G2JND7 137 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 CXorf51AA0A1B0GTR3 108 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 ZNF815PA8K554 130 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 HIGD1CA8MV81 97 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 H7BZZ5 65 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 ELOF1P60002 83 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 UBE2D3P61077 147 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 UBE2D2P62837 147 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 C1orf137Q5JT78 98 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 C10orf55Q5SWW7 151 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 C6orf201Q7Z4U5 140 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 Q8N6K4 173 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 PPP1R1CQ8WVI7 109 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 IFI27L1Q96BM0 104 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 CRCT1Q9UGL9 99 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 SNURFQ9Y675 71 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 PTPRDP23468 1912 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 VCANP13611 3396 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 DIP2BQ9P265 1576 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 TANC1Q9C0D5 1861 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 PLXNA1Q9UIW2 1896 aa1.63□□□□□ -2.15
TRAPPC13-205ENST00000504243 FBN3Q75N90 2809 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 HEATR5BQ9P2D3 2071 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 KIF21AQ7Z4S6 1674 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 MYO9AB2RTY4 2548 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 A0A1B0GWA3 101 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 TMEM14DPA8MWL7 114 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 CHKB-CPT1BH3BT56 60 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 HMGN2P05204 90 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 ARL14EPLP0DKL9 152 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 ZNF56Q15929 161 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 XAF1Q6GPH4 301 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 ODF3Q96PU9 254 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 MRPL36Q9P0J6 103 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 HIGD1BQ9P298 99 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 V9GYH0 126 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 ABCA8O94911 1581 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 RGPD8O14715 1765 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 RGPD5Q99666 1765 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 MYOFQ9NZM1 2061 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 PIEZO1Q92508 2521 aa1.62□□□□□ -2.15
TRAPPC13-205ENST00000504243 KNDC1Q76NI1 1749 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 NWD2Q9ULI1 1742 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 TRAV22A0A0B4J277 110 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 A0A0J9YY99 117 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 TEX49A0A1B0GTD5 131 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 SFTA3P0C7M3 94 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 SAA2P0DJI9 122 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 PRB4P10163 310 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 CNBPP62633 177 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 SSBP1Q04837 148 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 FAM74A4Q5TZK3 123 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 KRTAP26-1Q6PEX3 210 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 Q86TA4 180 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 AMELXQ99217 191 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 LENEPQ9Y5L5 61 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 LAMB1P07942 1786 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 CASP8AP2Q9UKL3 1982 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 SIP14410 1827 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 PATJQ8NI35 1801 aa1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 SPTBN5Q9NRC6 3674 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 URB2Q14146 1524 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-205ENST00000504243 COL6A3P12111 3177 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 EML5Q05BV3 1969 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 LRP5O75197 1615 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 PREX2Q70Z35 1606 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 MYO3AQ8NEV4 1616 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 PCLOQ9Y6V0 5065 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 IGLV3-32A0A0A0MS00 114 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 NUPR2A6NF83 97 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 RNASE3P12724 160 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 UBE2D1P51668 147 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 PLGLAQ15195 96 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 SHANK2Q9UPX8 1470 aa1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 LAMA2P24043 3122 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-205ENST00000504243 TIAM1Q13009 1591 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 EXPH5Q8NEV8 1989 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 ABCA2Q9BZC7 2435 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 PPRC1Q5VV67 1664 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 PTPRMP28827 1452 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 TRBV6-8A0A0A6YYG3 113 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 A0A0D9SFI3 127 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 MYMXA0A1B0GTQ4 84 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 CEBPZOSA8MTT3 80 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 DNAL4O96015 105 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 IGHV3-30P01768 117 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 IGHV3-30-5P0DP03 117 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 EFNA4P52798 201 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 DEFB121Q5J5C9 76 aa1.59□□□□□ -2.15
TRAPPC13-205ENST00000504243 ATP5EP2Q5VTU8 51 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms