RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, human

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEB-216	ENST00000497809	NCOA6	Q14686	2063 aa	Predicted RBP	4.59	□□□□□ -1.67
NEB-216	ENST00000497809	SCN3A	Q9NY46	2000 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	ZNF318	Q5VUA4	2279 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	DIDO1	Q9BTC0	2240 aa	Known RBP	4.59	□□□□□ -1.67
NEB-216	ENST00000497809	PAPPA2	Q9BXP8	1791 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	BDP1	A6H8Y1	2624 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	MUC4	Q99102	2169 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	TRBV30	A0A0K0K1B3	111 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	ZNF861P	O60384	105 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	COX6C	P09669	75 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	FAM215A	Q9Y5M1	114 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	NHS	Q6T4R5	1651 aa		4.59	□□□□□ -1.67
NEB-216	ENST00000497809	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	4.59	□□□□□ -1.68
NEB-216	ENST00000497809		S4R3C0	116 aa		4.58	□□□□□ -1.68
NEB-216	ENST00000497809	HEATR1	Q9H583	2144 aa	Known RBP	4.58	□□□□□ -1.68
NEB-216	ENST00000497809	CTXND1	A0A1B0GTU2	59 aa		4.58	□□□□□ -1.68
NEB-216	ENST00000497809	BAALC-AS2	P0C853	105 aa		4.58	□□□□□ -1.68
NEB-216	ENST00000497809		Q6ZR54	194 aa		4.58	□□□□□ -1.68
NEB-216	ENST00000497809	SLIT1	O75093	1534 aa		4.58	□□□□□ -1.68
NEB-216	ENST00000497809	IGKV3D-7	A0A0C4DH55	119 aa		4.57	□□□□□ -1.68
NEB-216	ENST00000497809	IGHV3-53	P01767	116 aa		4.57	□□□□□ -1.68
NEB-216	ENST00000497809	HMGA1	P17096	107 aa	Known RBP	4.57	□□□□□ -1.68
NEB-216	ENST00000497809	SPINK4	O60575	86 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	CDC42SE2	Q9NRR3	84 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	NRXN3	Q9Y4C0	1643 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	DLEC1	Q9Y238	1755 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	TTC28	Q96AY4	2481 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	LAMA4	Q16363	1823 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	TRAV23DV6	A0A075B6W5	121 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	TRBV6-8	A0A0A6YYG3	113 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	MYO16	Q9Y6X6	1858 aa		4.56	□□□□□ -1.68
NEB-216	ENST00000497809	UNC80	Q8N2C7	3258 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	MUC22	E2RYF6	1773 aa	Predicted RBP	4.55	□□□□□ -1.68
NEB-216	ENST00000497809	PARP4	Q9UKK3	1724 aa	Known RBP	4.55	□□□□□ -1.68
NEB-216	ENST00000497809		D6R8Y8	96 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809		J3QRE1	110 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	PSCA	O43653	123 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	IGLV1-47	P01700	117 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	IGHV3-33	P01772	117 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	IGLV7-43	P04211	117 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	ARMS2	P0C7Q2	107 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	MUSTN1	Q8IVN3	82 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809		Q8NAQ8	132 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.55	□□□□□ -1.68
NEB-216	ENST00000497809	EML5	Q05BV3	1969 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	SI	P14410	1827 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809	MALRD1	Q5VYJ5	2156 aa		4.55	□□□□□ -1.68
NEB-216	ENST00000497809		A0A087WYN8	130 aa		4.54	□□□□□ -1.68
NEB-216	ENST00000497809	CISD3	P0C7P0	127 aa		4.54	□□□□□ -1.68
NEB-216	ENST00000497809	C20orf166-AS1	Q96NR2	134 aa		4.54	□□□□□ -1.68
NEB-216	ENST00000497809	HEATR5B	Q9P2D3	2071 aa		4.54	□□□□□ -1.68
NEB-216	ENST00000497809	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.54	□□□□□ -1.68
NEB-216	ENST00000497809	IGLV3-16	A0A075B6K0	115 aa		4.54	□□□□□ -1.68
NEB-216	ENST00000497809	IGHV1-18	A0A0C4DH31	117 aa		4.54	□□□□□ -1.68
NEB-216	ENST00000497809	MUC6	Q6W4X9	2439 aa		4.54	□□□□□ -1.68
NEB-216	ENST00000497809	FASN	P49327	2511 aa	Known RBP	4.54	□□□□□ -1.68
NEB-216	ENST00000497809	NAV2	Q8IVL1	2488 aa		4.54	□□□□□ -1.68
NEB-216	ENST00000497809	SLPI	P03973	132 aa		4.53	□□□□□ -1.68
NEB-216	ENST00000497809	KRTAP1-1	Q07627	177 aa		4.53	□□□□□ -1.68
NEB-216	ENST00000497809	COL11A1	P12107	1806 aa	Predicted RBP	4.53	□□□□□ -1.68
NEB-216	ENST00000497809	MPDZ	O75970	2070 aa		4.53	□□□□□ -1.68
NEB-216	ENST00000497809	MDC1	Q14676	2089 aa	Known RBP	4.53	□□□□□ -1.68
NEB-216	ENST00000497809	SCN7A	Q01118	1682 aa		4.53	□□□□□ -1.68
NEB-216	ENST00000497809	TRBV7-4	A0A0J9YYF1	115 aa		4.53	□□□□□ -1.68
NEB-216	ENST00000497809	IGKV3-11	P04433	115 aa		4.53	□□□□□ -1.68
NEB-216	ENST00000497809	MIR22HG	Q0VDD5	57 aa		4.53	□□□□□ -1.68
NEB-216	ENST00000497809		Q6ZS52	159 aa		4.53	□□□□□ -1.68
NEB-216	ENST00000497809	LOC101927531	A0A1B0GV80	90 aa		4.52	□□□□□ -1.69
NEB-216	ENST00000497809	SPTB	P11277	2137 aa		4.52	□□□□□ -1.69
NEB-216	ENST00000497809	TOGARAM1	Q9Y4F4	1720 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809	TRAV12-3	A0A0B4J271	114 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809	TMEM254	Q8TBM7	123 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809	USP9X	Q93008	2570 aa	Predicted RBP	4.51	□□□□□ -1.69
NEB-216	ENST00000497809	CXorf51A	A0A1B0GTR3	108 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809		P0C880	135 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809	C14orf177	Q52M58	125 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809	ST20-AS1	Q8NBB2	130 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.51	□□□□□ -1.69
NEB-216	ENST00000497809	KIF25-AS1	Q9Y6Z4	181 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809	ZDBF2	Q9HCK1	2354 aa		4.51	□□□□□ -1.69
NEB-216	ENST00000497809	EPG5	Q9HCE0	2579 aa		4.5	□□□□□ -1.69
NEB-216	ENST00000497809	CHD6	Q8TD26	2715 aa		4.5	□□□□□ -1.69
NEB-216	ENST00000497809		A0A1B0GU33	70 aa		4.5	□□□□□ -1.69
NEB-216	ENST00000497809	HMGN4	O00479	90 aa		4.5	□□□□□ -1.69
NEB-216	ENST00000497809	FLNB	O75369	2602 aa	Known RBP	4.5	□□□□□ -1.69
NEB-216	ENST00000497809	DNAL4	O96015	105 aa		4.5	□□□□□ -1.69
NEB-216	ENST00000497809	LINC00612	Q8N6U2	182 aa		4.5	□□□□□ -1.69
NEB-216	ENST00000497809	TMEM263	Q8WUH6	116 aa	Known RBP	4.5	□□□□□ -1.69
NEB-216	ENST00000497809	KRTAP25-1	Q3LHN0	102 aa		4.49	□□□□□ -1.69
NEB-216	ENST00000497809	MYO7B	Q6PIF6	2116 aa		4.49	□□□□□ -1.69
NEB-216	ENST00000497809	UBALD1	Q8TB05	177 aa		4.49	□□□□□ -1.69
NEB-216	ENST00000497809	IGKV2D-30	A0A075B6S6	120 aa		4.49	□□□□□ -1.69
NEB-216	ENST00000497809	PIN1P1	O15428	100 aa		4.49	□□□□□ -1.69
NEB-216	ENST00000497809	IL9	P15248	144 aa		4.49	□□□□□ -1.69
NEB-216	ENST00000497809		Q8N9P0	234 aa	Predicted RBP	4.49	□□□□□ -1.69
NEB-216	ENST00000497809	WFDC6	Q9BQY6	131 aa		4.49	□□□□□ -1.69
NEB-216	ENST00000497809	C4A	P0C0L4	1744 aa		4.48	□□□□□ -1.69
NEB-216	ENST00000497809	C4B	P0C0L5	1744 aa		4.48	□□□□□ -1.69
NEB-216	ENST00000497809	LRCOL1	A6NCL2	159 aa		4.48	□□□□□ -1.69
NEB-216	ENST00000497809	SAA2	P0DJI9	122 aa	Predicted RBP	4.48	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms