RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 RNASE3P12724 160 aaKnown RBP8.65□□□□□ -1.02
COL25A1-204ENST00000494183 LECT2O14960 151 aa8.65□□□□□ -1.03
COL25A1-204ENST00000494183 IL17DQ8TAD2 202 aa8.65□□□□□ -1.03
COL25A1-204ENST00000494183 PRB2P02812 416 aaPredicted RBP8.64□□□□□ -1.03
COL25A1-204ENST00000494183 LINC01620Q4KN68 170 aa8.64□□□□□ -1.03
COL25A1-204ENST00000494183 RANBP2P49792 3224 aaKnown RBP8.64□□□□□ -1.03
COL25A1-204ENST00000494183 KLLNB2CW77 178 aa8.64□□□□□ -1.03
COL25A1-204ENST00000494183 CHCHD10Q8WYQ3 142 aaPredicted RBP8.64□□□□□ -1.03
COL25A1-204ENST00000494183 CENPEQ02224 2701 aa8.64□□□□□ -1.03
COL25A1-204ENST00000494183 IGLV4-3A0A075B6K6 122 aa8.63□□□□□ -1.03
COL25A1-204ENST00000494183 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
COL25A1-204ENST00000494183 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL25A1-204ENST00000494183 COL5A1P20908 1838 aaPredicted RBP8.63□□□□□ -1.03
COL25A1-204ENST00000494183 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
COL25A1-204ENST00000494183 RNF185Q96GF1 192 aa8.63□□□□□ -1.03
COL25A1-204ENST00000494183 IGHV4-28A0A0C4DH34 117 aa8.63□□□□□ -1.03
COL25A1-204ENST00000494183 EDN2P20800 178 aa8.63□□□□□ -1.03
COL25A1-204ENST00000494183 UBE2AP49459 152 aa8.63□□□□□ -1.03
COL25A1-204ENST00000494183 ATG2AQ2TAZ0 1938 aa8.63□□□□□ -1.03
COL25A1-204ENST00000494183 CRYGDP07320 174 aa8.62□□□□□ -1.03
COL25A1-204ENST00000494183 WFDC2Q14508 124 aa8.62□□□□□ -1.03
COL25A1-204ENST00000494183 NFE4Q86UQ8 179 aa8.62□□□□□ -1.03
COL25A1-204ENST00000494183 TNRC6BQ9UPQ9 1833 aaKnown RBP8.61□□□□□ -1.03
COL25A1-204ENST00000494183 A0A0J9YXY3 114 aa8.61□□□□□ -1.03
COL25A1-204ENST00000494183 TRBV27A0A0K0K1C4 114 aa8.61□□□□□ -1.03
COL25A1-204ENST00000494183 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
COL25A1-204ENST00000494183 CLEC2BQ92478 149 aa8.61□□□□□ -1.03
COL25A1-204ENST00000494183 DIRC1Q969H9 104 aa8.61□□□□□ -1.03
COL25A1-204ENST00000494183 EXPH5Q8NEV8 1989 aa8.61□□□□□ -1.03
COL25A1-204ENST00000494183 TAX1BP3O14907 124 aa8.61□□□□□ -1.03
COL25A1-204ENST00000494183 TRACP01848 142 aa8.61□□□□□ -1.03
COL25A1-204ENST00000494183 C9orf153Q5TBE3 101 aa8.61□□□□□ -1.03
COL25A1-204ENST00000494183 RNF183Q96D59 192 aa8.6□□□□□ -1.03
COL25A1-204ENST00000494183 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
COL25A1-204ENST00000494183 RBX1P62877 108 aa8.6□□□□□ -1.03
COL25A1-204ENST00000494183 RAI1Q7Z5J4 1906 aaPredicted RBP8.59□□□□□ -1.03
COL25A1-204ENST00000494183 LOC100131303A0A0U1RQF7 123 aa8.59□□□□□ -1.03
COL25A1-204ENST00000494183 MIAQ16674 131 aa8.59□□□□□ -1.03
COL25A1-204ENST00000494183 UFSP1Q6NVU6 142 aa8.59□□□□□ -1.03
COL25A1-204ENST00000494183 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
COL25A1-204ENST00000494183 GAS8-AS1O95177 125 aa8.58□□□□□ -1.04
COL25A1-204ENST00000494183 TEN1Q86WV5 123 aa8.58□□□□□ -1.04
COL25A1-204ENST00000494183 SPANXCQ9NY87 97 aa8.58□□□□□ -1.04
COL25A1-204ENST00000494183 MUC4Q99102 2169 aa8.58□□□□□ -1.04
COL25A1-204ENST00000494183 TRBV6-5A0A0K0K1A5 114 aa8.58□□□□□ -1.04
COL25A1-204ENST00000494183 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
COL25A1-204ENST00000494183 A0A0C4DFX4 3053 aa8.58□□□□□ -1.04
COL25A1-204ENST00000494183 KPRPQ5T749 579 aaPredicted RBP8.58□□□□□ -1.04
COL25A1-204ENST00000494183 TET2Q6N021 2002 aaPredicted RBP8.58□□□□□ -1.04
COL25A1-204ENST00000494183 AGRNO00468 2067 aa8.57□□□□□ -1.04
COL25A1-204ENST00000494183 IGKV2D-26A0A0A0MRZ7 120 aa8.57□□□□□ -1.04
COL25A1-204ENST00000494183 IGHV4-30-4P0DP06 118 aa8.57□□□□□ -1.04
COL25A1-204ENST00000494183 KIR2DL5BQ8NHK3 375 aa8.57□□□□□ -1.04
COL25A1-204ENST00000494183 NDUFS5O43920 106 aa8.57□□□□□ -1.04
COL25A1-204ENST00000494183 NRACQ8N912 160 aa8.57□□□□□ -1.04
COL25A1-204ENST00000494183 HIGD2AQ9BW72 106 aa8.57□□□□□ -1.04
COL25A1-204ENST00000494183 CHD7Q9P2D1 2997 aa8.57□□□□□ -1.04
COL25A1-204ENST00000494183 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.56□□□□□ -1.04
COL25A1-204ENST00000494183 TRAV10A0A0B4J240 114 aa8.56□□□□□ -1.04
COL25A1-204ENST00000494183 H7C423 109 aa8.56□□□□□ -1.04
COL25A1-204ENST00000494183 MRPS12O15235 138 aaKnown RBP8.56□□□□□ -1.04
COL25A1-204ENST00000494183 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
COL25A1-204ENST00000494183 U3KQK5 164 aa8.56□□□□□ -1.04
COL25A1-204ENST00000494183 NDUFA7O95182 113 aa8.56□□□□□ -1.04
COL25A1-204ENST00000494183 POLR2KP53803 58 aaKnown RBP8.56□□□□□ -1.04
COL25A1-204ENST00000494183 C14orf177Q52M58 125 aa8.56□□□□□ -1.04
COL25A1-204ENST00000494183 C9orf85Q96MD7 179 aa8.56□□□□□ -1.04
COL25A1-204ENST00000494183 NREPQ16612 68 aa8.56□□□□□ -1.04
COL25A1-204ENST00000494183 PTH2Q96A98 100 aa8.55□□□□□ -1.04
COL25A1-204ENST00000494183 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
COL25A1-204ENST00000494183 A8MZ25 164 aa8.55□□□□□ -1.04
COL25A1-204ENST00000494183 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
COL25A1-204ENST00000494183 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
COL25A1-204ENST00000494183 EML5Q05BV3 1969 aa8.55□□□□□ -1.04
COL25A1-204ENST00000494183 TSHBP01222 138 aa8.55□□□□□ -1.04
COL25A1-204ENST00000494183 CRIP2P52943 208 aaPredicted RBP8.55□□□□□ -1.04
COL25A1-204ENST00000494183 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
COL25A1-204ENST00000494183 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 ACYP1P07311 99 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 TRBV10-2A0A0K0K1G8 114 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 JMJD7-PLA2G4BH0Y9G9 81 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 IGLV1-51P01701 117 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 COX7BP24311 80 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 PYGO1Q9Y3Y4 419 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 CPAMD8Q8IZJ3 1885 aa8.54□□□□□ -1.04
COL25A1-204ENST00000494183 RBM3P98179 157 aaKnown RBP8.53□□□□□ -1.04
COL25A1-204ENST00000494183 BPTFQ12830 3046 aa8.53□□□□□ -1.04
COL25A1-204ENST00000494183 CITED1Q99966 193 aa8.53□□□□□ -1.04
COL25A1-204ENST00000494183 H3BT86 120 aa8.53□□□□□ -1.04
COL25A1-204ENST00000494183 CLUHP3Q96NS8 147 aa8.53□□□□□ -1.04
COL25A1-204ENST00000494183 A0A096LNI7 61 aa8.52□□□□□ -1.04
COL25A1-204ENST00000494183 IBA57-AS1B1ANH7 110 aa8.52□□□□□ -1.04
COL25A1-204ENST00000494183 SYCNQ0VAF6 134 aa8.52□□□□□ -1.05
COL25A1-204ENST00000494183 C5orf42Q9H799 3197 aa8.52□□□□□ -1.05
COL25A1-204ENST00000494183 TMEM256-PLSCR3K7ERE1 68 aa8.52□□□□□ -1.05
COL25A1-204ENST00000494183 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
COL25A1-204ENST00000494183 LINC00308Q8TCZ7 52 aa8.52□□□□□ -1.05
COL25A1-204ENST00000494183 CNFNQ9BYD5 112 aa8.52□□□□□ -1.05
COL25A1-204ENST00000494183 NDUFB1O75438 58 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms