RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CRIP2P52943 208 aaPredicted RBP3.34□□□□□ -1.88
TRA2B-215ENST00000492417 KRTAP10-3P60369 221 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 SPATA12Q7Z6I5 190 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 IGF2BP2-AS1Q96M15 143 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 U3KQE9 123 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 FBN2P35556 2912 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 FRMD6-AS1P0C7T7 363 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.88
TRA2B-215ENST00000492417 NBPF19A0A087WUL8 3843 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 A0A1B0GX51 115 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 ATOX1O00244 68 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 IGLV1-51P01701 117 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 ACYP1P07311 99 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 ODF3L2Q3SX64 289 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 C6orf226Q5I0X4 101 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 Q6ZUT4 128 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 HIGD1BQ9P298 99 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 BRI3O95415 125 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 LINC01620Q4KN68 170 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 MT-ATP8P03928 68 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 Q8N1Y9 231 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 TMEM141Q96I45 108 aa3.33□□□□□ -1.88
TRA2B-215ENST00000492417 MUC4Q99102 2169 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 SDHAF1A6NFY7 115 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 BAALC-AS2P0C853 105 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 SPART-AS1P0CW21 52 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 MALP21145 153 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 MRPL55Q7Z7F7 128 aaKnown RBP3.32□□□□□ -1.88
TRA2B-215ENST00000492417 TMEM243Q9BU79 118 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 MDFICQ9P1T7 246 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 TP53TG3Q9ULZ0 132 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 TRAV26-2A0A0B4J265 109 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 TNP2Q05952 138 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 ZNF493Q6ZR52 646 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 DCANP1Q8TF63 244 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 DPH3Q96FX2 82 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 NDUFV3P56181 108 aaKnown RBP3.32□□□□□ -1.88
TRA2B-215ENST00000492417 RPL36AP83881 106 aaKnown RBP3.32□□□□□ -1.88
TRA2B-215ENST00000492417 ATP6V0E2Q8NHE4 81 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 ZNRF2Q8NHG8 242 aa3.32□□□□□ -1.88
TRA2B-215ENST00000492417 RPL36ALQ969Q0 106 aaKnown RBP3.32□□□□□ -1.88
TRA2B-215ENST00000492417 LTAP01374 205 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 FAM222AQ5U5X8 452 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 Q6ZQT7 251 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 SPENQ96T58 3664 aaKnown RBP3.31□□□□□ -1.88
TRA2B-215ENST00000492417 IGKV3D-7A0A0C4DH55 119 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 ZNF80P51504 273 aaPredicted RBP3.31□□□□□ -1.88
TRA2B-215ENST00000492417 C11orf45Q8TAV5 145 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 MRPL53Q96EL3 112 aaKnown RBP3.31□□□□□ -1.88
TRA2B-215ENST00000492417 SPATA25Q9BR10 227 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 MSRB1Q9NZV6 116 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 GATA1P15976 413 aaPredicted RBP3.31□□□□□ -1.88
TRA2B-215ENST00000492417 TRPT1Q86TN4 253 aaKnown RBP3.31□□□□□ -1.88
TRA2B-215ENST00000492417 SPATA3Q8NHX4 192 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 CSMD1Q96PZ7 3565 aa3.31□□□□□ -1.88
TRA2B-215ENST00000492417 A0A0B4J2C4 111 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 CTRLP40313 264 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 C9orf47Q6ZRZ4 202 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 Q6ZTI0 123 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 GTSF1Q8WW33 167 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 ATP5G1P05496 136 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 ZNF580Q9UK33 172 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 PFN2P35080 140 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 BRK1Q8WUW1 75 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 C16orf74Q96GX8 76 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 YPEL4Q96NS1 127 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 TP73-AS1Q9UF72 201 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 BSNQ9UPA5 3926 aa3.3□□□□□ -1.88
TRA2B-215ENST00000492417 IGHV4-28A0A0C4DH34 117 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 A0A0J9YWU9 116 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 TRBV10-2A0A0K0K1G8 114 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 RBAKDNA6NC62 111 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 GYPEP15421 78 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 RNF152Q8N8N0 203 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 PKIGQ9Y2B9 76 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 TRAV13-2A0A0B4J235 113 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 H3BT86 120 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 CLPSL2Q6UWE3 100 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 MUSTN1Q8IVN3 82 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 E9PLD3 99 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 I3L3M4 83 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 UQCRQO14949 82 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 PSCAO43653 123 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 NANOS2P60321 138 aaKnown RBP3.29□□□□□ -1.88
TRA2B-215ENST00000492417 RPL32P62910 135 aaKnown RBP3.29□□□□□ -1.88
TRA2B-215ENST00000492417 FHL3Q13643 280 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 PRR9Q5T870 116 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 LINC00322Q6ZN03 302 aaPredicted RBP3.29□□□□□ -1.88
TRA2B-215ENST00000492417 Q9HAA7 133 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 LENEPQ9Y5L5 61 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 DEFB131BA0A096LNP1 70 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 SMIM9A6NGZ8 99 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 M0QXV9 152 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 LINC00643Q86TS7 51 aa3.29□□□□□ -1.88
TRA2B-215ENST00000492417 SUMO4Q6EEV6 95 aa3.28□□□□□ -1.88
TRA2B-215ENST00000492417 ZFAND2AQ8N6M9 145 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms