RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CDKN2A-AS1Q9UH64 79 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 PRRC2AP48634 2157 aaKnown RBP5.31□□□□□ -1.56
NPHP3-208ENST00000490993 A8MTW9 85 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 TSPAN13O95857 204 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 UBE2WQ96B02 151 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 CSDC2Q9Y534 153 aaKnown RBP5.31□□□□□ -1.56
NPHP3-208ENST00000490993 ZNF561-AS1K7EIQ3 104 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 TTC32Q5I0X7 151 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 ZFAND6Q6FIF0 208 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 C5orf38Q86SI9 138 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 IGHV3-30P01768 117 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 PRM2P04554 102 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 IGHV3-30-5P0DP03 117 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 SHISA2Q6UWI4 295 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 SPANXDQ9BXN6 97 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 SPANXCQ9NY87 97 aa5.31□□□□□ -1.56
NPHP3-208ENST00000490993 RBMY1FQ15415 496 aaKnown RBP5.3□□□□□ -1.56
NPHP3-208ENST00000490993 SMR3AQ99954 134 aa5.3□□□□□ -1.56
NPHP3-208ENST00000490993 WFDC10AQ9H1F0 79 aa5.3□□□□□ -1.56
NPHP3-208ENST00000490993 PRRC2CQ9Y520 2896 aaKnown RBP5.3□□□□□ -1.56
NPHP3-208ENST00000490993 RMI2Q96E14 147 aa5.3□□□□□ -1.56
NPHP3-208ENST00000490993 INAFM2P0DMQ5 153 aa5.29□□□□□ -1.56
NPHP3-208ENST00000490993 CLPSL2Q6UWE3 100 aa5.29□□□□□ -1.56
NPHP3-208ENST00000490993 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.29□□□□□ -1.56
NPHP3-208ENST00000490993 SND1-IT1Q9HBX3 110 aa5.29□□□□□ -1.56
NPHP3-208ENST00000490993 CDC42SE2Q9NRR3 84 aa5.29□□□□□ -1.56
NPHP3-208ENST00000490993 DNAH14Q0VDD8 3507 aa5.29□□□□□ -1.56
NPHP3-208ENST00000490993 A0A1B0GV72 72 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 H0YGX0 51 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 CARD19Q96LW7 228 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 ANKRD29Q8N6D5 301 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 LINC01620Q4KN68 170 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 TEN1Q86WV5 123 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 LAMA1P25391 3075 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 ZNF462Q96JM2 2506 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 A0A0C4DFX4 3053 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 IGHV4-28A0A0C4DH34 117 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 KRTAP1-3Q8IUG1 177 aa5.28□□□□□ -1.56
NPHP3-208ENST00000490993 DEFB4AO15263 64 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 Q6ZSN1 163 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 TRAV26-1A0A087WT03 109 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 GAGE12HA6NDE8 117 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 IBA57-AS1B1ANH7 110 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 WFDC2Q14508 124 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 G3V4G9 280 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 TRBV30A0A0K0K1B3 111 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 TRBV10-2A0A0K0K1G8 114 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 H3BT86 120 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 FHL2Q14192 279 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 DAND5Q8N907 189 aa5.27□□□□□ -1.57
NPHP3-208ENST00000490993 UBE2DNLQ8IWF7 75 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 MIR7-3HGQ8N6C7 128 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 LINC00308Q8TCZ7 52 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 IGHV3-33P01772 117 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 REG3AQ06141 175 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 LINC00242Q5T6M2 205 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 MYO18BQ8IUG5 2567 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 TCL1BO95988 128 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 LOC100131303A0A0U1RQF7 123 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 C1orf43Q9BWL3 253 aa5.26□□□□□ -1.57
NPHP3-208ENST00000490993 GAGE2BQ13066 116 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 GAGE2EQ4V326 116 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 NTN5Q8WTR8 489 aaPredicted RBP5.25□□□□□ -1.57
NPHP3-208ENST00000490993 GAGE2DQ9UEU5 116 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 RBX1P62877 108 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 UFSP1Q6NVU6 142 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 FOXI1Q12951 378 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 LINC00269Q8N2A0 174 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 IGLV10-54A0A075B6I4 117 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 TSPEAR-AS2P59090 65 aa5.25□□□□□ -1.57
NPHP3-208ENST00000490993 LINC00959A0A1B0GUT2 108 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 ACYP1P07311 99 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 LELP1Q5T871 98 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 CHCHD10Q8WYQ3 142 aaPredicted RBP5.24□□□□□ -1.57
NPHP3-208ENST00000490993 RNF183Q96D59 192 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 BAALC-AS2P0C853 105 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 CD164L2Q6UWJ8 174 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 H3BQ85 93 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 C11orf45Q8TAV5 145 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 KLK12Q9UKR0 248 aa5.24□□□□□ -1.57
NPHP3-208ENST00000490993 IGHV4-30-4P0DP06 118 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 CCL18P55774 89 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 ZNF575Q86XF7 245 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 ANAPC13Q9BS18 74 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 AKAP13Q12802 2813 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 PTPN13Q12923 2485 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 SMIM1B2RUZ4 78 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 IGKV2D-24A0A075B6R9 120 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 MUC7Q8TAX7 377 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 CAMK2N2Q96S95 79 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 LINC00694P0DN24 101 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 ORMDL1Q9P0S3 153 aa5.23□□□□□ -1.57
NPHP3-208ENST00000490993 A0A1B0GUV1 79 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 SPATA25Q9BR10 227 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 A8MZ25 164 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 LINC01561Q8N1V8 128 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 TMEM126AQ9H061 195 aa5.22□□□□□ -1.57
NPHP3-208ENST00000490993 ANKRD17O75179 2603 aaKnown RBP5.22□□□□□ -1.57
NPHP3-208ENST00000490993 PSCAO43653 123 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms