RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 TMEM14CQ9P0S9 112 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 ZFHX4Q86UP3 3567 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 GOLGB1Q14789 3259 aaKnown RBP1.58□□□□□ -2.16
HFM1-208ENST00000488023 TEP1Q99973 2627 aaKnown RBP1.58□□□□□ -2.16
HFM1-208ENST00000488023 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 CPSF1Q10570 1443 aaKnown RBP1.58□□□□□ -2.16
HFM1-208ENST00000488023 FAM208AQ9UK61 1670 aaKnown RBP1.58□□□□□ -2.16
HFM1-208ENST00000488023 INE1O15225 51 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 C12orf73Q69YU5 71 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 LINC00322Q6ZN03 302 aaPredicted RBP1.58□□□□□ -2.16
HFM1-208ENST00000488023 TTC9CQ8N5M4 171 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 DMAC1Q96GE9 116 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 SPANXDQ9BXN6 97 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 SNHG12Q9BXW3 62 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 DDX60LQ5H9U9 1706 aaKnown RBP1.58□□□□□ -2.16
HFM1-208ENST00000488023 ZNF292O60281 2723 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 SIP14410 1827 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 FAM186AA6NE01 2351 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 PTPN13Q12923 2485 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 SPTBN4Q9H254 2564 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 TOGARAM1Q9Y4F4 1720 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 MUC22E2RYF6 1773 aaPredicted RBP1.57□□□□□ -2.16
HFM1-208ENST00000488023 TRAV12-3A0A0B4J271 114 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 M0R2N4 97 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 IGHV3-30P01768 117 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 CCKP06307 115 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 IGHV3-30-5P0DP03 117 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 C22orf24Q9Y442 160 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 SNURFQ9Y675 71 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 ABCA12Q86UK0 2595 aa1.57□□□□□ -2.16
HFM1-208ENST00000488023 ABCA2Q9BZC7 2435 aa1.56□□□□□ -2.16
HFM1-208ENST00000488023 ARFGEF3Q5TH69 2177 aa1.56□□□□□ -2.16
HFM1-208ENST00000488023 LOC110117498A0A087WWA1 95 aa1.56□□□□□ -2.16
HFM1-208ENST00000488023 LOC101927531A0A1B0GV80 90 aa1.56□□□□□ -2.16
HFM1-208ENST00000488023 ZNF563Q8TA94 476 aa1.56□□□□□ -2.16
HFM1-208ENST00000488023 OBSCN-AS1Q96MR7 158 aa1.56□□□□□ -2.16
HFM1-208ENST00000488023 DPH3P1Q9H4G8 78 aa1.56□□□□□ -2.16
HFM1-208ENST00000488023 PLXNA2O75051 1894 aa1.56□□□□□ -2.16
HFM1-208ENST00000488023 CHD3Q12873 2000 aaKnown RBP1.56□□□□□ -2.16
HFM1-208ENST00000488023 FAM24AA6NFZ4 105 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 PTPRDP23468 1912 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 GNG2P59768 71 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 RPL37AP61513 92 aaKnown RBP1.55□□□□□ -2.16
HFM1-208ENST00000488023 ARFGEF2Q9Y6D5 1785 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 NCOR2Q9Y618 2525 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 PLXNA1Q9UIW2 1896 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 DAPK1P53355 1430 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 TRBV6-7A0A0A0MS04 114 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 RBAKDNA6NC62 111 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 SNCAP37840 140 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 SPATA45Q537H7 98 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 C5orf38Q86SI9 138 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 SBSPONQ8IVN8 264 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 ZCCHC13Q8WW36 166 aaKnown RBP1.55□□□□□ -2.16
HFM1-208ENST00000488023 MED9Q9NWA0 146 aa1.55□□□□□ -2.16
HFM1-208ENST00000488023 INTS1Q8N201 2190 aaKnown RBP1.54□□□□□ -2.16
HFM1-208ENST00000488023 RANBP2P49792 3224 aaKnown RBP1.54□□□□□ -2.16
HFM1-208ENST00000488023 PHIPQ8WWQ0 1821 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 USP24Q9UPU5 2620 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 LRRC37AA6NMS7 1700 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 VCANP13611 3396 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 MYO9AB2RTY4 2548 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 ZNF831Q5JPB2 1677 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 CNOT1A5YKK6 2376 aaKnown RBP1.54□□□□□ -2.16
HFM1-208ENST00000488023 SDK1Q7Z5N4 2213 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 EXPH5Q8NEV8 1989 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 IGLV3-32A0A0A0MS00 114 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 LOC730098B7Z3J9 87 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 HCG22E2RYF7 251 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 FXYD4P59646 89 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 COL5A1-AS1Q5SY13 56 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 AQP10Q96PS8 301 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 LINC00474Q9P2X8 69 aa1.54□□□□□ -2.16
HFM1-208ENST00000488023 TNRC6BQ9UPQ9 1833 aaKnown RBP1.54□□□□□ -2.16
HFM1-208ENST00000488023 CD163L1Q9NR16 1453 aa1.53□□□□□ -2.16
HFM1-208ENST00000488023 MAP2P11137 1827 aaKnown RBP1.53□□□□□ -2.16
HFM1-208ENST00000488023 NRXN2Q9P2S2 1712 aa1.53□□□□□ -2.16
HFM1-208ENST00000488023 TRAV13-2A0A0B4J235 113 aa1.53□□□□□ -2.16
HFM1-208ENST00000488023 TRBV10-3A0A0K0K1G6 114 aa1.53□□□□□ -2.16
HFM1-208ENST00000488023 UBE2L5PA0A1B0GUS4 154 aa1.53□□□□□ -2.16
HFM1-208ENST00000488023 HIGD1CA8MV81 97 aa1.53□□□□□ -2.16
HFM1-208ENST00000488023 TMEM262E9PQX1 116 aa1.53□□□□□ -2.16
HFM1-208ENST00000488023 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
HFM1-208ENST00000488023 GDF5OSQ5U4N7 250 aa1.53□□□□□ -2.16
HFM1-208ENST00000488023 MYO18AQ92614 2054 aaKnown RBP1.53□□□□□ -2.16
HFM1-208ENST00000488023 AFDNP55196 1824 aaKnown RBP1.53□□□□□ -2.17
HFM1-208ENST00000488023 ANKRD50Q9ULJ7 1429 aa1.53□□□□□ -2.17
HFM1-208ENST00000488023 TET1Q8NFU7 2136 aa1.53□□□□□ -2.17
HFM1-208ENST00000488023 EYSQ5T1H1 3165 aa1.53□□□□□ -2.17
HFM1-208ENST00000488023 LAMA2P24043 3122 aaKnown RBP1.52□□□□□ -2.17
HFM1-208ENST00000488023 CREBBPQ92793 2442 aa1.52□□□□□ -2.17
HFM1-208ENST00000488023 MYO18BQ8IUG5 2567 aa1.52□□□□□ -2.17
HFM1-208ENST00000488023 IGKV2-29A2NJV5 120 aaPredicted RBP1.52□□□□□ -2.17
HFM1-208ENST00000488023 UNQ6190/PRO20217Q6UXQ8 127 aa1.52□□□□□ -2.17
HFM1-208ENST00000488023 NDUFA11Q86Y39 141 aa1.52□□□□□ -2.17
HFM1-208ENST00000488023 DUOX1Q9NRD9 1551 aa1.52□□□□□ -2.17
HFM1-208ENST00000488023 PCNX1Q96RV3 2341 aa1.52□□□□□ -2.17
HFM1-208ENST00000488023 PIGBOS1A0A0B4J2F0 54 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms