RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 SYCNQ0VAF6 134 aa7.4□□□□□ -1.22
PRPF4B-206ENST00000481109 NREPQ16612 68 aa7.4□□□□□ -1.22
PRPF4B-206ENST00000481109 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.23
PRPF4B-206ENST00000481109 TRAV22A0A0B4J277 110 aa7.4□□□□□ -1.23
PRPF4B-206ENST00000481109 IGKV2-29A2NJV5 120 aaPredicted RBP7.4□□□□□ -1.23
PRPF4B-206ENST00000481109 LINC01547P58512 204 aaPredicted RBP7.4□□□□□ -1.23
PRPF4B-206ENST00000481109 IGFL3Q6UXB1 125 aa7.4□□□□□ -1.23
PRPF4B-206ENST00000481109 ATP11AUNQ6ZP68 121 aa7.4□□□□□ -1.23
PRPF4B-206ENST00000481109 C11orf72Q8NBR9 251 aa7.4□□□□□ -1.23
PRPF4B-206ENST00000481109 PRO3102Q9H379 93 aa7.4□□□□□ -1.23
PRPF4B-206ENST00000481109 RPL11P62913 178 aaKnown RBP7.39□□□□□ -1.23
PRPF4B-206ENST00000481109 Q8NA96 180 aa7.39□□□□□ -1.23
PRPF4B-206ENST00000481109 FAM104AQ969W3 186 aa7.39□□□□□ -1.23
PRPF4B-206ENST00000481109 VPREB1P12018 145 aa7.39□□□□□ -1.23
PRPF4B-206ENST00000481109 RNASE3P12724 160 aaKnown RBP7.39□□□□□ -1.23
PRPF4B-206ENST00000481109 CLEC19AQ6UXS0 136 aa7.39□□□□□ -1.23
PRPF4B-206ENST00000481109 TTTY12Q9BZ98 90 aa7.39□□□□□ -1.23
PRPF4B-206ENST00000481109 PRR9Q5T870 116 aa7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 SMG1Q96Q15 3661 aaKnown RBP7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 TECTAO75443 2155 aa7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 IGLV5-39A0A0G2JS06 123 aa7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 F8W735 103 aaPredicted RBP7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 LECT2O14960 151 aa7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 UBE2AP49459 152 aa7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 LCA10Q71F78 164 aa7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 Q8N3U1 123 aa7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 RNF5Q99942 180 aa7.38□□□□□ -1.23
PRPF4B-206ENST00000481109 IGKV3-15P01624 115 aa7.37□□□□□ -1.23
PRPF4B-206ENST00000481109 ECSCRQ19T08 205 aa7.37□□□□□ -1.23
PRPF4B-206ENST00000481109 CADP27708 2225 aa7.37□□□□□ -1.23
PRPF4B-206ENST00000481109 COL27A1Q8IZC6 1860 aaPredicted RBP7.37□□□□□ -1.23
PRPF4B-206ENST00000481109 A6NN06 94 aa7.37□□□□□ -1.23
PRPF4B-206ENST00000481109 ZFAND2AQ8N6M9 145 aa7.37□□□□□ -1.23
PRPF4B-206ENST00000481109 PRR26Q8N8Z3 221 aa7.37□□□□□ -1.23
PRPF4B-206ENST00000481109 BBC3Q96PG8 261 aaPredicted RBP7.37□□□□□ -1.23
PRPF4B-206ENST00000481109 BDP1A6H8Y1 2624 aa7.36□□□□□ -1.23
PRPF4B-206ENST00000481109 ATP1A1-AS1Q5TC04 95 aa7.36□□□□□ -1.23
PRPF4B-206ENST00000481109 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
PRPF4B-206ENST00000481109 SPATA3Q8NHX4 192 aa7.36□□□□□ -1.23
PRPF4B-206ENST00000481109 SMIM11BQ8TCY0 68 aa7.36□□□□□ -1.23
PRPF4B-206ENST00000481109 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
PRPF4B-206ENST00000481109 Q9H8V8 135 aa7.36□□□□□ -1.23
PRPF4B-206ENST00000481109 M0QY20 66 aa7.35□□□□□ -1.23
PRPF4B-206ENST00000481109 ZNF318Q5VUA4 2279 aa7.35□□□□□ -1.23
PRPF4B-206ENST00000481109 IGLV11-55A0A075B6I3 123 aa7.35□□□□□ -1.23
PRPF4B-206ENST00000481109 PSPHP1O15172 72 aa7.35□□□□□ -1.23
PRPF4B-206ENST00000481109 LINC00269Q8N2A0 174 aa7.35□□□□□ -1.23
PRPF4B-206ENST00000481109 ARRDC1-AS1Q9H2J1 176 aa7.35□□□□□ -1.23
PRPF4B-206ENST00000481109 F5H697 171 aa7.34□□□□□ -1.23
PRPF4B-206ENST00000481109 LINC00337Q8N6G1 96 aa7.34□□□□□ -1.23
PRPF4B-206ENST00000481109 LOC110117498A0A087WWA1 95 aa7.34□□□□□ -1.23
PRPF4B-206ENST00000481109 CLPSL1A2RUU4 121 aa7.33□□□□□ -1.24
PRPF4B-206ENST00000481109 DEFB104AQ8WTQ1 72 aa7.33□□□□□ -1.24
PRPF4B-206ENST00000481109 ICE1Q9Y2F5 2266 aa7.33□□□□□ -1.24
PRPF4B-206ENST00000481109 IGHV1OR15-1A0A075B7D0 117 aa7.33□□□□□ -1.24
PRPF4B-206ENST00000481109 IGHV1-3A0A0C4DH29 117 aa7.33□□□□□ -1.24
PRPF4B-206ENST00000481109 PLCE1Q9P212 2302 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 IGKV2-28A0A075B6P5 120 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 A8MUN3 132 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 C16orf90A8MZG2 172 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 BPY2O14599 106 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 IGKV2D-28P01615 120 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 CCL3L1P16619 93 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 IGHV1-2P23083 117 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 RPL36AP83881 106 aaKnown RBP7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 Q5VV11 94 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 C1orf64Q8NEQ6 169 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 RPL36ALQ969Q0 106 aaKnown RBP7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 CDKN2A-AS1Q9UH64 79 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 ZFHX3Q15911 3703 aa7.32□□□□□ -1.24
PRPF4B-206ENST00000481109 Q6ZQT0 140 aa7.31□□□□□ -1.24
PRPF4B-206ENST00000481109 ABCA1O95477 2261 aa7.31□□□□□ -1.24
PRPF4B-206ENST00000481109 IGHV3-72A0A0B4J1Y9 119 aa7.31□□□□□ -1.24
PRPF4B-206ENST00000481109 OCR1Q9BZK8 76 aa7.31□□□□□ -1.24
PRPF4B-206ENST00000481109 DMXL1Q9Y485 3027 aa7.31□□□□□ -1.24
PRPF4B-206ENST00000481109 DCHS1Q96JQ0 3298 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 EP300Q09472 2414 aaPredicted RBP7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 GNRH2O43555 120 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 IGLV1-44P01699 117 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 HAMPP81172 84 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 ITLN2Q8WWU7 325 aaPredicted RBP7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 MGAQ8IWI9 3026 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 A0A087WWL8 130 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 IGHV3-38A0A0C4DH36 116 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 PDE6GP18545 87 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 LINC01356Q8N9X3 169 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 CYP4F30PQ9H0H9 118 aa7.3□□□□□ -1.24
PRPF4B-206ENST00000481109 MAP1BP46821 2468 aaKnown RBP7.29□□□□□ -1.24
PRPF4B-206ENST00000481109 RP1L1Q8IWN7 2480 aaPredicted RBP7.29□□□□□ -1.24
PRPF4B-206ENST00000481109 FAM19A3Q7Z5A8 133 aa7.29□□□□□ -1.24
PRPF4B-206ENST00000481109 C9orf106Q8NAJ2 232 aa7.29□□□□□ -1.24
PRPF4B-206ENST00000481109 TRBV10-1A0A0K0K1A3 114 aa7.28□□□□□ -1.24
PRPF4B-206ENST00000481109 PSCAO43653 123 aa7.28□□□□□ -1.24
PRPF4B-206ENST00000481109 Q6ZTI0 123 aa7.28□□□□□ -1.24
PRPF4B-206ENST00000481109 SND1-IT1Q9HBX3 110 aa7.28□□□□□ -1.24
PRPF4B-206ENST00000481109 CNOT1A5YKK6 2376 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-206ENST00000481109 SLPIP03973 132 aa7.28□□□□□ -1.24
PRPF4B-206ENST00000481109 S4R3C0 116 aa7.28□□□□□ -1.24
PRPF4B-206ENST00000481109 K7EQG2 157 aa7.27□□□□□ -1.24
PRPF4B-206ENST00000481109 LY6G6DO95868 133 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms