RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.23
SMIM4-203ENST00000477703 COX11Q9Y6N1 276 aa13.58□□□□□ -0.23
SMIM4-203ENST00000477703 LYRM9A8MSI8 78 aa13.58□□□□□ -0.24
SMIM4-203ENST00000477703 CSDC2Q9Y534 153 aaKnown RBP13.58□□□□□ -0.24
SMIM4-203ENST00000477703 STAB1Q9NY15 2570 aa13.58□□□□□ -0.24
SMIM4-203ENST00000477703 MAST4O15021 2626 aa13.57□□□□□ -0.24
SMIM4-203ENST00000477703 IGHV4-28A0A0C4DH34 117 aa13.57□□□□□ -0.24
SMIM4-203ENST00000477703 ZNF815PA8K554 130 aa13.57□□□□□ -0.24
SMIM4-203ENST00000477703 TINCRA0A1B0GVN0 87 aa13.56□□□□□ -0.24
SMIM4-203ENST00000477703 DEFB4AO15263 64 aa13.56□□□□□ -0.24
SMIM4-203ENST00000477703 Q8NAQ8 132 aa13.56□□□□□ -0.24
SMIM4-203ENST00000477703 RNF183Q96D59 192 aa13.56□□□□□ -0.24
SMIM4-203ENST00000477703 UBE2D1P51668 147 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 PLEKHB2Q96CS7 222 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 TM2D2Q9BX73 214 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 K7EP13 123 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 LEPROTO15243 131 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 FXYD2P54710 66 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 EGFEM1PQ0D2K5 195 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 TAL2Q16559 108 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 CEND1Q8N111 149 aa13.55□□□□□ -0.24
SMIM4-203ENST00000477703 J3QQQ9 107 aa13.54□□□□□ -0.24
SMIM4-203ENST00000477703 DGAT2L7PQ6IED9 249 aa13.54□□□□□ -0.24
SMIM4-203ENST00000477703 MIFP14174 115 aa13.53□□□□□ -0.24
SMIM4-203ENST00000477703 GCSHP23434 173 aa13.53□□□□□ -0.24
SMIM4-203ENST00000477703 TMEM243Q9BU79 118 aa13.53□□□□□ -0.24
SMIM4-203ENST00000477703 A6NDN8 102 aa13.53□□□□□ -0.24
SMIM4-203ENST00000477703 CDC42SE2Q9NRR3 84 aa13.53□□□□□ -0.24
SMIM4-203ENST00000477703 PKD1L1Q8TDX9 2849 aa13.52□□□□□ -0.24
SMIM4-203ENST00000477703 DNAH3Q8TD57 4116 aa13.52□□□□□ -0.24
SMIM4-203ENST00000477703 H7C423 109 aa13.51□□□□□ -0.25
SMIM4-203ENST00000477703 TIRAPP58753 221 aa13.51□□□□□ -0.25
SMIM4-203ENST00000477703 PRO0255Q9UI72 69 aa13.51□□□□□ -0.25
SMIM4-203ENST00000477703 CELA1Q9UNI1 258 aa13.51□□□□□ -0.25
SMIM4-203ENST00000477703 TRBV6-8A0A0A6YYG3 113 aa13.5□□□□□ -0.25
SMIM4-203ENST00000477703 H3BRM9 83 aa13.5□□□□□ -0.25
SMIM4-203ENST00000477703 FAM19A3Q7Z5A8 133 aa13.5□□□□□ -0.25
SMIM4-203ENST00000477703 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
SMIM4-203ENST00000477703 A0A0J9YY99 117 aa13.5□□□□□ -0.25
SMIM4-203ENST00000477703 A8MZ25 164 aa13.5□□□□□ -0.25
SMIM4-203ENST00000477703 GYPEP15421 78 aa13.5□□□□□ -0.25
SMIM4-203ENST00000477703 HIST1H4GQ99525 98 aa13.5□□□□□ -0.25
SMIM4-203ENST00000477703 ANK2Q01484 3957 aa13.49□□□□□ -0.25
SMIM4-203ENST00000477703 IGLV5-45A0A087WSX0 123 aa13.49□□□□□ -0.25
SMIM4-203ENST00000477703 LGALS3P17931 250 aaKnown RBP13.49□□□□□ -0.25
SMIM4-203ENST00000477703 COX6A2Q02221 97 aa13.49□□□□□ -0.25
SMIM4-203ENST00000477703 SCGB1D4Q6XE38 83 aa13.49□□□□□ -0.25
SMIM4-203ENST00000477703 TRAV8-3A0A0A6YYJ7 113 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 IGHV3-30-3P0DP02 117 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 SMAGPQ0VAQ4 97 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 LINC00242Q5T6M2 205 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 OR5A1Q8NGJ0 315 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 IGHV1-58A0A0C4DH39 117 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 UBE2L6O14933 153 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 LINC00469Q8N7U9 141 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 ATP6V0E2Q8NHE4 81 aa13.48□□□□□ -0.25
SMIM4-203ENST00000477703 DAD1P61803 113 aa13.47□□□□□ -0.25
SMIM4-203ENST00000477703 AMMECR1LQ6DCA0 310 aa13.47□□□□□ -0.25
SMIM4-203ENST00000477703 VSIG2Q96IQ7 327 aa13.47□□□□□ -0.25
SMIM4-203ENST00000477703 GEMIN7Q9H840 131 aaKnown RBP13.47□□□□□ -0.25
SMIM4-203ENST00000477703 CDKN2A-AS1Q9UH64 79 aa13.47□□□□□ -0.25
SMIM4-203ENST00000477703 PAX4O43316 350 aa13.45□□□□□ -0.26
SMIM4-203ENST00000477703 GAGE6Q13070 117 aa13.45□□□□□ -0.26
SMIM4-203ENST00000477703 SPINK8P0C7L1 97 aa13.45□□□□□ -0.26
SMIM4-203ENST00000477703 SPART-AS1P0CW21 52 aa13.45□□□□□ -0.26
SMIM4-203ENST00000477703 SMIM13P0DJ93 91 aa13.45□□□□□ -0.26
SMIM4-203ENST00000477703 PTTG1IPP53801 180 aa13.45□□□□□ -0.26
SMIM4-203ENST00000477703 TMEM101Q96IK0 257 aa13.45□□□□□ -0.26
SMIM4-203ENST00000477703 C9orf118A6NHY6 69 aa13.44□□□□□ -0.26
SMIM4-203ENST00000477703 IGLV4-60A0A075B6I1 120 aa13.43□□□□□ -0.26
SMIM4-203ENST00000477703 TRAV13-1A0A0B4J241 112 aa13.43□□□□□ -0.26
SMIM4-203ENST00000477703 G3V4G9 280 aa13.43□□□□□ -0.26
SMIM4-203ENST00000477703 HERVK_113P63121 156 aa13.43□□□□□ -0.26
SMIM4-203ENST00000477703 C10orf126Q8N4M7 172 aa13.43□□□□□ -0.26
SMIM4-203ENST00000477703 RAB37Q96AX2 223 aa13.43□□□□□ -0.26
SMIM4-203ENST00000477703 SPANXB1Q9NS25 103 aaPredicted RBP13.43□□□□□ -0.26
SMIM4-203ENST00000477703 NHP2Q9NX24 153 aaKnown RBP13.43□□□□□ -0.26
SMIM4-203ENST00000477703 COL6A5A8TX70 2615 aa13.43□□□□□ -0.26
SMIM4-203ENST00000477703 CHCHD5Q9BSY4 110 aa13.43□□□□□ -0.26
SMIM4-203ENST00000477703 K7ERJ3 54 aa13.42□□□□□ -0.26
SMIM4-203ENST00000477703 ATP5G1P05496 136 aa13.42□□□□□ -0.26
SMIM4-203ENST00000477703 SRSF9Q13242 221 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMIM4-203ENST00000477703 UBE2V1Q13404 147 aa13.41□□□□□ -0.26
SMIM4-203ENST00000477703 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
SMIM4-203ENST00000477703 A0A1B0GWB2 263 aa13.4□□□□□ -0.26
SMIM4-203ENST00000477703 CCL25O15444 150 aa13.4□□□□□ -0.26
SMIM4-203ENST00000477703 VAMP3Q15836 100 aa13.4□□□□□ -0.26
SMIM4-203ENST00000477703 RETNQ9HD89 108 aa13.4□□□□□ -0.26
SMIM4-203ENST00000477703 A0A096LPF7 62 aa13.4□□□□□ -0.26
SMIM4-203ENST00000477703 IGHV3-30P01768 117 aa13.4□□□□□ -0.26
SMIM4-203ENST00000477703 IGHV3-30-5P0DP03 117 aa13.4□□□□□ -0.26
SMIM4-203ENST00000477703 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
SMIM4-203ENST00000477703 A0A0J9YXY3 114 aa13.39□□□□□ -0.27
SMIM4-203ENST00000477703 H3BUT2 72 aa13.39□□□□□ -0.27
SMIM4-203ENST00000477703 NAA38Q9BRA0 125 aaKnown RBP13.39□□□□□ -0.27
SMIM4-203ENST00000477703 TRAV26-1A0A087WT03 109 aa13.38□□□□□ -0.27
SMIM4-203ENST00000477703 F5H768 121 aa13.37□□□□□ -0.27
SMIM4-203ENST00000477703 SAMD5Q5TGI4 173 aa13.37□□□□□ -0.27
SMIM4-203ENST00000477703 ZFAND6Q6FIF0 208 aa13.37□□□□□ -0.27
SMIM4-203ENST00000477703 NDUFA12Q9UI09 145 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms