RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 GAGE7O76087 117 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 GAGE12FP0CL80 117 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 GAGE12GP0CL81 117 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 GAGE12IP0CL82 117 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 RRN3P1Q2M238 152 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 SLC25A29Q8N8R3 303 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 STAB1Q9NY15 2570 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 TRGV2A0A075B6R0 118 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 TMEM238LA0A1B0GVL6 79 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 TINCRA0A1B0GVN0 87 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 GAGE12JA6NER3 117 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 A6NJY4 79 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 GAGE4Q13068 117 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 GAGE5Q13069 117 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 GAGE13Q4V321 117 aa7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 SPANXB1Q9NS25 103 aaPredicted RBP7.87□□□□□ -1.15
HLA-DMB-260ENST00000477537 C21orf62-AS1Q17RA5 79 aa7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 DGAT2L7PQ6IED9 249 aa7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 PRIMA1Q86XR5 153 aa7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 OVOL2Q9BRP0 275 aa7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 IGHV3-30-3P0DP02 117 aa7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 UBE2D3P61077 147 aa7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 UBE2D2P62837 147 aa7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 DAZ4Q86SG3 579 aaKnown RBP7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 DAZ3Q9NR90 486 aaKnown RBP7.86□□□□□ -1.15
HLA-DMB-260ENST00000477537 TRAV8-3A0A0A6YYJ7 113 aa7.85□□□□□ -1.15
HLA-DMB-260ENST00000477537 IGHV3-30P01768 117 aa7.85□□□□□ -1.15
HLA-DMB-260ENST00000477537 IGHV3-30-5P0DP03 117 aa7.85□□□□□ -1.15
HLA-DMB-260ENST00000477537 UBE2D1P51668 147 aa7.85□□□□□ -1.15
HLA-DMB-260ENST00000477537 LINC00694P0DN24 101 aa7.84□□□□□ -1.15
HLA-DMB-260ENST00000477537 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
HLA-DMB-260ENST00000477537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.84□□□□□ -1.15
HLA-DMB-260ENST00000477537 GEMIN7Q9H840 131 aaKnown RBP7.84□□□□□ -1.15
HLA-DMB-260ENST00000477537 VWFP04275 2813 aa7.84□□□□□ -1.15
HLA-DMB-260ENST00000477537 IGHV1-58A0A0C4DH39 117 aa7.84□□□□□ -1.16
HLA-DMB-260ENST00000477537 SPINK8P0C7L1 97 aa7.84□□□□□ -1.16
HLA-DMB-260ENST00000477537 C10orf126Q8N4M7 172 aa7.84□□□□□ -1.16
HLA-DMB-260ENST00000477537 SPATA3Q8NHX4 192 aa7.84□□□□□ -1.16
HLA-DMB-260ENST00000477537 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.16
HLA-DMB-260ENST00000477537 TRGV4A0A0C4DH28 118 aa7.83□□□□□ -1.16
HLA-DMB-260ENST00000477537 LOC100131303A0A0U1RQF7 123 aa7.83□□□□□ -1.16
HLA-DMB-260ENST00000477537 APOMO95445 188 aa7.83□□□□□ -1.16
HLA-DMB-260ENST00000477537 OCIAD2Q56VL3 154 aa7.83□□□□□ -1.16
HLA-DMB-260ENST00000477537 A0A0J9YXY3 114 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 CIDEAO60543 219 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 C9orf66Q5T8R8 295 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 SBSPONQ8IVN8 264 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 VSIG2Q96IQ7 327 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 A8MZ25 164 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 TMEM238C9JI98 176 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 INSL3P51460 131 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 TIRAPP58753 221 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 CDKN2A-AS1Q9UH64 79 aa7.82□□□□□ -1.16
HLA-DMB-260ENST00000477537 ANK2Q01484 3957 aa7.81□□□□□ -1.16
HLA-DMB-260ENST00000477537 TSPAN13O95857 204 aa7.81□□□□□ -1.16
HLA-DMB-260ENST00000477537 FHL2Q14192 279 aa7.81□□□□□ -1.16
HLA-DMB-260ENST00000477537 KRTAP24-1Q3LI83 254 aa7.81□□□□□ -1.16
HLA-DMB-260ENST00000477537 TMEM243Q9BU79 118 aa7.81□□□□□ -1.16
HLA-DMB-260ENST00000477537 NDUFA12Q9UI09 145 aa7.81□□□□□ -1.16
HLA-DMB-260ENST00000477537 CMYA5Q8N3K9 4069 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 UBE2L6O14933 153 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 CFC1BP0CG36 223 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 CFC1P0CG37 223 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 RBX1P62877 108 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 COX6A2Q02221 97 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 SMAGPQ0VAQ4 97 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 RNF151Q2KHN1 245 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 GTSF1LQ9H1H1 148 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 IGLV5-45A0A087WSX0 123 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 DEFB130BP0DP73 79 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 DEFB130AP0DP74 79 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 LINC00242Q5T6M2 205 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 MUSTN1Q8IVN3 82 aa7.8□□□□□ -1.16
HLA-DMB-260ENST00000477537 TRAV13-1A0A0B4J241 112 aa7.79□□□□□ -1.16
HLA-DMB-260ENST00000477537 A4D1N5 150 aa7.79□□□□□ -1.16
HLA-DMB-260ENST00000477537 H3BMG7 143 aa7.79□□□□□ -1.16
HLA-DMB-260ENST00000477537 HERVK_113P63121 156 aa7.79□□□□□ -1.16
HLA-DMB-260ENST00000477537 RPL24P83731 157 aaKnown RBP7.79□□□□□ -1.16
HLA-DMB-260ENST00000477537 CDC42SE2Q9NRR3 84 aa7.79□□□□□ -1.16
HLA-DMB-260ENST00000477537 SFTA2Q6UW10 78 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 TMEM101Q96IK0 257 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 LITAFQ99732 161 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 X6R8D5 127 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 LOC107984156A0A0G2JMH3 177 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 ZFAND6Q6FIF0 208 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 FAM19A3Q7Z5A8 133 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 ARL17AQ8IVW1 177 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 KIR2DL5BQ8NHK3 375 aa7.78□□□□□ -1.16
HLA-DMB-260ENST00000477537 K7ERU9 68 aa7.77□□□□□ -1.17
HLA-DMB-260ENST00000477537 LINC00612Q8N6U2 182 aa7.77□□□□□ -1.17
HLA-DMB-260ENST00000477537 CITED1Q99966 193 aa7.77□□□□□ -1.17
HLA-DMB-260ENST00000477537 PRO1854Q9UHT4 67 aa7.77□□□□□ -1.17
HLA-DMB-260ENST00000477537 SMIM9A6NGZ8 99 aa7.76□□□□□ -1.17
HLA-DMB-260ENST00000477537 H7C423 109 aa7.76□□□□□ -1.17
HLA-DMB-260ENST00000477537 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
HLA-DMB-260ENST00000477537 GAGE6Q13070 117 aa7.76□□□□□ -1.17
HLA-DMB-260ENST00000477537 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms