RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 VSIG2Q96IQ7 327 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 PEMTQ9UBM1 199 aa5.96□□□□□ -1.46
CCDC93-208ENST00000474546 IGHV3OR16-8A0A075B7F1 116 aa5.95□□□□□ -1.46
CCDC93-208ENST00000474546 A0A1B0GX51 115 aa5.95□□□□□ -1.46
CCDC93-208ENST00000474546 G3V318 75 aa5.95□□□□□ -1.46
CCDC93-208ENST00000474546 H7C423 109 aa5.95□□□□□ -1.46
CCDC93-208ENST00000474546 IGHV4-39P01824 125 aa5.95□□□□□ -1.46
CCDC93-208ENST00000474546 RPL39P62891 51 aaKnown RBP5.95□□□□□ -1.46
CCDC93-208ENST00000474546 LINC01560Q8TB33 94 aa5.95□□□□□ -1.46
CCDC93-208ENST00000474546 LINC00467Q9BRT7 94 aa5.95□□□□□ -1.46
CCDC93-208ENST00000474546 IGLV5-45A0A087WSX0 123 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 TEX49A0A1B0GTD5 131 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 ATOX1O00244 68 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 GATA3P23771 443 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
CCDC93-208ENST00000474546 ADORA2A-AS1P86434 159 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 S100A7L2Q5SY68 101 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 FAM19A3Q7Z5A8 133 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 LRRC75A-AS1Q8N1F1 130 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 WFDC12Q8WWY7 111 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 SPXQ9BT56 116 aa5.94□□□□□ -1.46
CCDC93-208ENST00000474546 IGHV3OR16-13A0A075B7E8 117 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 IGHV3-49A0A0A0MS15 119 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 IGHV3-74A0A0B4J1X5 117 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 TRAV13-2A0A0B4J235 113 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 A0A0J9YXV3 536 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 H7C2G1 150 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 IGLV1-40P01703 118 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 PRB3Q04118 309 aaPredicted RBP5.93□□□□□ -1.46
CCDC93-208ENST00000474546 FAM74A4Q5TZK3 123 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 LITAFQ99732 161 aa5.93□□□□□ -1.46
CCDC93-208ENST00000474546 CSDC2Q9Y534 153 aaKnown RBP5.93□□□□□ -1.46
CCDC93-208ENST00000474546 A0A087WWL8 130 aa5.92□□□□□ -1.46
CCDC93-208ENST00000474546 J3KRW8 73 aa5.92□□□□□ -1.46
CCDC93-208ENST00000474546 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
CCDC93-208ENST00000474546 CDSNQ15517 529 aa5.92□□□□□ -1.46
CCDC93-208ENST00000474546 SDIM1Q6ZPB5 146 aa5.92□□□□□ -1.46
CCDC93-208ENST00000474546 C3orf22Q8N5N4 141 aa5.92□□□□□ -1.46
CCDC93-208ENST00000474546 DCANP1Q8TF63 244 aa5.92□□□□□ -1.46
CCDC93-208ENST00000474546 LINC00526Q96FQ7 95 aa5.92□□□□□ -1.46
CCDC93-208ENST00000474546 BEX4Q9NWD9 120 aaPredicted RBP5.92□□□□□ -1.46
CCDC93-208ENST00000474546 ABCA1O95477 2261 aa5.92□□□□□ -1.46
CCDC93-208ENST00000474546 RYR2Q92736 4967 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 VWFP04275 2813 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 TRAV12-3A0A0B4J271 114 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 H0YGX0 51 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 J3KT08 172 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 EMP1P54849 157 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 LMO4P61968 165 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 DGAT2L7PQ6IED9 249 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 UNQ9165/PRO28630Q6UXU0 137 aa5.91□□□□□ -1.46
CCDC93-208ENST00000474546 HRNRQ86YZ3 2850 aaPredicted RBP5.9□□□□□ -1.46
CCDC93-208ENST00000474546 A6NDX4 124 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 A8MTW9 85 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 CCDC179H3BU77 68 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 K7EQG2 157 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 NDUFA7O95182 113 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 TGFAP01135 160 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 C9orf153Q5TBE3 101 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 ATP5EP2Q5VTU8 51 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 TMEM219Q86XT9 240 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 SMIM20Q8N5G0 67 aa5.9□□□□□ -1.46
CCDC93-208ENST00000474546 HERC2O95714 4834 aa5.9□□□□□ -1.47
CCDC93-208ENST00000474546 IGLV5-39A0A0G2JS06 123 aa5.89□□□□□ -1.47
CCDC93-208ENST00000474546 TRBV10-1A0A0K0K1A3 114 aa5.89□□□□□ -1.47
CCDC93-208ENST00000474546 DNAL4O96015 105 aa5.89□□□□□ -1.47
CCDC93-208ENST00000474546 PRB4P10163 310 aaPredicted RBP5.89□□□□□ -1.47
CCDC93-208ENST00000474546 CRYGAP11844 174 aa5.89□□□□□ -1.47
CCDC93-208ENST00000474546 SHISA2Q6UWI4 295 aa5.89□□□□□ -1.47
CCDC93-208ENST00000474546 OR13C6PQ8NH95 151 aa5.89□□□□□ -1.47
CCDC93-208ENST00000474546 Q96MF0 132 aa5.89□□□□□ -1.47
CCDC93-208ENST00000474546 UBE2D4Q9Y2X8 147 aa5.89□□□□□ -1.47
CCDC93-208ENST00000474546 TRAV8-3A0A0A6YYJ7 113 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 IGHV3-53P01767 116 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 ELANEP08246 267 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 COX7CP15954 63 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 DSCR9P59020 149 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 TMEM258P61165 79 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 CFHR3Q02985 330 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 C5orf38Q86SI9 138 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 LINC00308Q8TCZ7 52 aa5.88□□□□□ -1.47
CCDC93-208ENST00000474546 TENM3Q9P273 2699 aa5.87□□□□□ -1.47
CCDC93-208ENST00000474546 H3BQ85 93 aa5.87□□□□□ -1.47
CCDC93-208ENST00000474546 RPL28P46779 137 aaKnown RBP5.87□□□□□ -1.47
CCDC93-208ENST00000474546 DAZ2Q13117 558 aaKnown RBP5.87□□□□□ -1.47
CCDC93-208ENST00000474546 DAZ4Q86SG3 579 aaKnown RBP5.87□□□□□ -1.47
CCDC93-208ENST00000474546 CITED2Q99967 270 aaPredicted RBP5.87□□□□□ -1.47
CCDC93-208ENST00000474546 DAZ3Q9NR90 486 aaKnown RBP5.87□□□□□ -1.47
CCDC93-208ENST00000474546 LINC01548A6NM66 108 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 NDUFC2-KCTD14E9PQ53 114 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 F6UB75 175 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
CCDC93-208ENST00000474546 BCE1O60756 84 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 CRPP02741 224 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 BAALC-AS2P0C853 105 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 PSMB8P28062 276 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 CMC4P56277 68 aaPredicted RBP5.86□□□□□ -1.47
CCDC93-208ENST00000474546 BEAN1Q3B7T3 259 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms