RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 MT-ATP8P03928 68 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 ELOF1P60002 83 aaKnown RBP0.73□□□□□ -2.29
VPS8-220ENST00000469713 UBE2L3P68036 154 aaKnown RBP0.73□□□□□ -2.29
VPS8-220ENST00000469713 COMMD6Q7Z4G1 85 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 AQP10Q96PS8 301 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 CCL19Q99731 98 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 SHROOM2Q13796 1616 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 TCHHQ07283 1943 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 TANC1Q9C0D5 1861 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 C10orf71Q711Q0 1435 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 BIRC6Q9NR09 4857 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
VPS8-220ENST00000469713 C5orf42Q9H799 3197 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 NIPBLQ6KC79 2804 aaeCLIP0.72□□□□□ -2.29
VPS8-220ENST00000469713 PIEZO2Q9H5I5 2752 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 A0A087WTM6 91 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 SSSCA1O60232 199 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 CCL3L1P16619 93 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 DCDP81605 110 aaKnown RBP0.72□□□□□ -2.29
VPS8-220ENST00000469713 SSBP1Q04837 148 aaKnown RBP0.72□□□□□ -2.29
VPS8-220ENST00000469713 COL5A1-AS1Q5SY13 56 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 C10orf128Q5T292 105 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 Q6ZQY7 126 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 FAM213BQ8TBF2 198 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 COX7B2Q8TF08 81 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 OTOGQ6ZRI0 2925 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 PRDM2Q13029 1718 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 ZNF609O15014 1411 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 SCAPERQ9BY12 1400 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 RELNP78509 3460 aa0.72□□□□□ -2.29
VPS8-220ENST00000469713 EP300Q09472 2414 aaPredicted RBP0.72□□□□□ -2.29
VPS8-220ENST00000469713 DMBT1Q9UGM3 2413 aaPredicted RBP0.72□□□□□ -2.29
VPS8-220ENST00000469713 SETBP1Q9Y6X0 1596 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 CEP290O15078 2479 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 ARHGAP5Q13017 1502 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 ASCC3Q8N3C0 2202 aaKnown RBP0.71□□□□□ -2.3
VPS8-220ENST00000469713 NBEAQ8NFP9 2946 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 PIGBOS1A0A0B4J2F0 54 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 hADV29S1A0JD25 119 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 GNGT2O14610 69 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 GNG11P61952 73 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 UBA52P62987 128 aaKnown RBP0.71□□□□□ -2.3
VPS8-220ENST00000469713 ZNF818PQ6ZRF7 136 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 C4orf33Q8N1A6 199 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 CSMD1Q96PZ7 3565 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 CHD1O14646 1710 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 UNC80Q8N2C7 3258 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 DCHS1Q96JQ0 3298 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 ABCC5O15440 1437 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 BLMP54132 1417 aaPredicted RBP0.71□□□□□ -2.3
VPS8-220ENST00000469713 SSPOA2VEC9 5147 aa0.71□□□□□ -2.3
VPS8-220ENST00000469713 FAT4Q6V0I7 4981 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 SPTBP11277 2137 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 KMT2DO14686 5537 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 TOPAZ1Q8N9V7 1692 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 GOLGA3Q08378 1498 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 TRBV7-3A0A075B6L6 115 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 TRBV7-1A0A0A6YYK4 115 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 TRBV30A0A0K0K1B3 111 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 CAV3P56539 151 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 EDDM3BP56851 147 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 GNG2P59768 71 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 LINC00575Q6W349 94 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 MYOZ3Q8TDC0 251 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 Q96NJ1 140 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 DPY30Q9C005 99 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 CYP4F30PQ9H0H9 118 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 ZNF236Q9UL36 1845 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 TGP01266 2768 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 KDM6BO15054 1643 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 FAM186AA6NE01 2351 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 PPIP5K1Q6PFW1 1433 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 PCNX1Q96RV3 2341 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 TTC37Q6PGP7 1564 aa0.7□□□□□ -2.3
VPS8-220ENST00000469713 CNOT1A5YKK6 2376 aaKnown RBP0.69□□□□□ -2.3
VPS8-220ENST00000469713 LY6G6CO95867 125 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 PPP1R17O96001 155 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 ATP5EP56381 51 aaPredicted RBP0.69□□□□□ -2.3
VPS8-220ENST00000469713 KLKP1Q107X0 134 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 SFTA2Q6UW10 78 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 VAMP8Q9BV40 100 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 BET1LQ9NYM9 111 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 V9GYV3 84 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 SIPA1L3O60292 1781 aaPredicted RBP0.69□□□□□ -2.3
VPS8-220ENST00000469713 CFAP54Q96N23 3096 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 ZFHX3Q15911 3703 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 KIAA1551Q9HCM1 1747 aa0.69□□□□□ -2.3
VPS8-220ENST00000469713 KDM5AP29375 1690 aaKnown RBP0.69□□□□□ -2.3
VPS8-220ENST00000469713 MAP2P11137 1827 aaKnown RBP0.68□□□□□ -2.3
VPS8-220ENST00000469713 COL12A1Q99715 3063 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 ACANP16112 2415 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 RAPGEF2Q9Y4G8 1499 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 DOCK11Q5JSL3 2073 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 H3BQ15 152 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 SEC11AP67812 179 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 Q0VG73 95 aa0.68□□□□□ -2.3
VPS8-220ENST00000469713 FAM74A4Q5TZK3 123 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms