RNA–Protein interactions for RNA: ENST00000468516.1

FOXN4-204, Transcript of forkhead box N4, humanhuman

TSL 2

Gene FOXN4, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-204ENST00000468516 GTF2H5Q6ZYL4 71 aa9.25□□□□□ -0.93
FOXN4-204ENST00000468516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.25□□□□□ -0.93
FOXN4-204ENST00000468516 MTORP42345 2549 aa9.25□□□□□ -0.93
FOXN4-204ENST00000468516 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
FOXN4-204ENST00000468516 FHL2Q14192 279 aa9.24□□□□□ -0.93
FOXN4-204ENST00000468516 SAMD5Q5TGI4 173 aa9.24□□□□□ -0.93
FOXN4-204ENST00000468516 WFDC9Q8NEX5 89 aa9.24□□□□□ -0.93
FOXN4-204ENST00000468516 SPATA3Q8NHX4 192 aa9.24□□□□□ -0.93
FOXN4-204ENST00000468516 RAB37Q96AX2 223 aa9.24□□□□□ -0.93
FOXN4-204ENST00000468516 X6R8D5 127 aa9.24□□□□□ -0.93
FOXN4-204ENST00000468516 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
FOXN4-204ENST00000468516 GAGE10A6NGK3 116 aa9.23□□□□□ -0.93
FOXN4-204ENST00000468516 K7ERJ3 54 aa9.23□□□□□ -0.93
FOXN4-204ENST00000468516 IGHV3-30-3P0DP02 117 aa9.23□□□□□ -0.93
FOXN4-204ENST00000468516 GAGE4Q13068 117 aa9.23□□□□□ -0.93
FOXN4-204ENST00000468516 GAGE5Q13069 117 aa9.23□□□□□ -0.93
FOXN4-204ENST00000468516 GAGE13Q4V321 117 aa9.23□□□□□ -0.93
FOXN4-204ENST00000468516 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
FOXN4-204ENST00000468516 IGLL5B9A064 214 aa9.22□□□□□ -0.93
FOXN4-204ENST00000468516 IGHV3-30P01768 117 aa9.22□□□□□ -0.93
FOXN4-204ENST00000468516 IGHV3-30-5P0DP03 117 aa9.22□□□□□ -0.93
FOXN4-204ENST00000468516 FABP2P12104 132 aa9.22□□□□□ -0.93
FOXN4-204ENST00000468516 SETXQ7Z333 2677 aaKnown RBP9.21□□□□□ -0.93
FOXN4-204ENST00000468516 TRGV4A0A0C4DH28 118 aa9.21□□□□□ -0.93
FOXN4-204ENST00000468516 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.93
FOXN4-204ENST00000468516 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.93
FOXN4-204ENST00000468516 DGAT2L7PQ6IED9 249 aa9.21□□□□□ -0.93
FOXN4-204ENST00000468516 VSIG2Q96IQ7 327 aa9.21□□□□□ -0.93
FOXN4-204ENST00000468516 TMEM243Q9BU79 118 aa9.21□□□□□ -0.93
FOXN4-204ENST00000468516 APOC4P55056 127 aa9.2□□□□□ -0.94
FOXN4-204ENST00000468516 HERVK_113P63121 156 aa9.2□□□□□ -0.94
FOXN4-204ENST00000468516 LYRM9A8MSI8 78 aa9.2□□□□□ -0.94
FOXN4-204ENST00000468516 TMEM238C9JI98 176 aa9.2□□□□□ -0.94
FOXN4-204ENST00000468516 C10orf126Q8N4M7 172 aa9.2□□□□□ -0.94
FOXN4-204ENST00000468516 GEMIN7Q9H840 131 aaKnown RBP9.2□□□□□ -0.94
FOXN4-204ENST00000468516 CDC42SE2Q9NRR3 84 aa9.2□□□□□ -0.94
FOXN4-204ENST00000468516 SPCS1Q9Y6A9 102 aa9.2□□□□□ -0.94
FOXN4-204ENST00000468516 FN1P02751 2386 aaKnown RBP9.19□□□□□ -0.94
FOXN4-204ENST00000468516 A0A0J9YXY3 114 aa9.19□□□□□ -0.94
FOXN4-204ENST00000468516 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
FOXN4-204ENST00000468516 NAA38Q9BRA0 125 aaKnown RBP9.19□□□□□ -0.94
FOXN4-204ENST00000468516 NSD1Q96L73 2696 aaPredicted RBP9.18□□□□□ -0.94
FOXN4-204ENST00000468516 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
FOXN4-204ENST00000468516 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
FOXN4-204ENST00000468516 LINC00242Q5T6M2 205 aa9.18□□□□□ -0.94
FOXN4-204ENST00000468516 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
FOXN4-204ENST00000468516 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
FOXN4-204ENST00000468516 TIMM17BO60830 172 aa9.17□□□□□ -0.94
FOXN4-204ENST00000468516 LITAFQ99732 161 aa9.17□□□□□ -0.94
FOXN4-204ENST00000468516 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
FOXN4-204ENST00000468516 SPANXCQ9NY87 97 aa9.17□□□□□ -0.94
FOXN4-204ENST00000468516 CDKN2A-AS1Q9UH64 79 aa9.17□□□□□ -0.94
FOXN4-204ENST00000468516 TRBV6-8A0A0A6YYG3 113 aa9.16□□□□□ -0.94
FOXN4-204ENST00000468516 UBE2L6O14933 153 aa9.16□□□□□ -0.94
FOXN4-204ENST00000468516 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
FOXN4-204ENST00000468516 NDUFA12Q9UI09 145 aa9.16□□□□□ -0.94
FOXN4-204ENST00000468516 SPINK8P0C7L1 97 aa9.16□□□□□ -0.94
FOXN4-204ENST00000468516 C2CD3Q4AC94 2353 aa9.15□□□□□ -0.94
FOXN4-204ENST00000468516 NDUFA1O15239 70 aa9.15□□□□□ -0.95
FOXN4-204ENST00000468516 COX6A2Q02221 97 aa9.15□□□□□ -0.95
FOXN4-204ENST00000468516 A0A0B4J2C4 111 aa9.14□□□□□ -0.95
FOXN4-204ENST00000468516 CFC1BP0CG36 223 aa9.14□□□□□ -0.95
FOXN4-204ENST00000468516 CFC1P0CG37 223 aa9.14□□□□□ -0.95
FOXN4-204ENST00000468516 MIFP14174 115 aa9.14□□□□□ -0.95
FOXN4-204ENST00000468516 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
FOXN4-204ENST00000468516 RNF183Q96D59 192 aa9.14□□□□□ -0.95
FOXN4-204ENST00000468516 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
FOXN4-204ENST00000468516 SMIM1B2RUZ4 78 aa9.13□□□□□ -0.95
FOXN4-204ENST00000468516 F5H768 121 aa9.13□□□□□ -0.95
FOXN4-204ENST00000468516 TSPAN13O95857 204 aa9.13□□□□□ -0.95
FOXN4-204ENST00000468516 DEFB130BP0DP73 79 aa9.13□□□□□ -0.95
FOXN4-204ENST00000468516 DEFB130AP0DP74 79 aa9.13□□□□□ -0.95
FOXN4-204ENST00000468516 PGPEP1Q9NXJ5 209 aa9.13□□□□□ -0.95
FOXN4-204ENST00000468516 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.12□□□□□ -0.95
FOXN4-204ENST00000468516 MIAQ16674 131 aa9.12□□□□□ -0.95
FOXN4-204ENST00000468516 FAM222AQ5U5X8 452 aa9.12□□□□□ -0.95
FOXN4-204ENST00000468516 Q8NAQ8 132 aa9.12□□□□□ -0.95
FOXN4-204ENST00000468516 A4D1N5 150 aa9.12□□□□□ -0.95
FOXN4-204ENST00000468516 DEFB135Q30KP9 77 aa9.12□□□□□ -0.95
FOXN4-204ENST00000468516 LYRM7Q5U5X0 104 aa9.12□□□□□ -0.95
FOXN4-204ENST00000468516 HIVEP1P15822 2718 aa9.11□□□□□ -0.95
FOXN4-204ENST00000468516 TRAV13-1A0A0B4J241 112 aa9.11□□□□□ -0.95
FOXN4-204ENST00000468516 IGHV4-28A0A0C4DH34 117 aa9.11□□□□□ -0.95
FOXN4-204ENST00000468516 MUSTN1Q8IVN3 82 aa9.11□□□□□ -0.95
FOXN4-204ENST00000468516 ATP6V0E2Q8NHE4 81 aa9.11□□□□□ -0.95
FOXN4-204ENST00000468516 PRO1854Q9UHT4 67 aa9.11□□□□□ -0.95
FOXN4-204ENST00000468516 APOMO95445 188 aa9.1□□□□□ -0.95
FOXN4-204ENST00000468516 IFITM1P13164 125 aa9.1□□□□□ -0.95
FOXN4-204ENST00000468516 GYPEP15421 78 aa9.1□□□□□ -0.95
FOXN4-204ENST00000468516 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
FOXN4-204ENST00000468516 BAHCC1Q9P281 2608 aa9.1□□□□□ -0.95
FOXN4-204ENST00000468516 SETD2Q9BYW2 2564 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-204ENST00000468516 TRAV26-1A0A087WT03 109 aa9.09□□□□□ -0.95
FOXN4-204ENST00000468516 A0A1B0GUV1 79 aa9.09□□□□□ -0.95
FOXN4-204ENST00000468516 A8MZ25 164 aa9.09□□□□□ -0.95
FOXN4-204ENST00000468516 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-204ENST00000468516 IGHV4-30-4P0DP06 118 aa9.09□□□□□ -0.95
FOXN4-204ENST00000468516 GAGE6Q13070 117 aa9.09□□□□□ -0.95
FOXN4-204ENST00000468516 OCIAD2Q56VL3 154 aa9.09□□□□□ -0.95
FOXN4-204ENST00000468516 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms