RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 DAZ3Q9NR90 486 aaKnown RBP9.59□□□□□ -0.87
UBE4B-206ENST00000466379 TRBV6-4A0A1B0GX49 114 aa9.58□□□□□ -0.88
UBE4B-206ENST00000466379 TMEM223A0PJW6 202 aa9.58□□□□□ -0.88
UBE4B-206ENST00000466379 FBN1P35555 2871 aaKnown RBP9.58□□□□□ -0.88
UBE4B-206ENST00000466379 F8WDY8 70 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 APOC4P55056 127 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 CEND1Q8N111 149 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 KIR2DL5BQ8NHK3 375 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 A6NDN8 102 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 DGAT2L7PQ6IED9 249 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 SCGB1D4Q6XE38 83 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 RAB37Q96AX2 223 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 HIST1H4GQ99525 98 aa9.57□□□□□ -0.88
UBE4B-206ENST00000466379 NAA38Q9BRA0 125 aaKnown RBP9.57□□□□□ -0.88
UBE4B-206ENST00000466379 IGHV4-30-4P0DP06 118 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 MRPS36P82909 103 aaKnown RBP9.56□□□□□ -0.88
UBE4B-206ENST00000466379 FAM222AQ5U5X8 452 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 LINC00612Q8N6U2 182 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 SMIM9A6NGZ8 99 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 J3QQQ9 107 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 K7ERJ3 54 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 CRYBA4P53673 196 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 SBSPONQ8IVN8 264 aa9.56□□□□□ -0.88
UBE4B-206ENST00000466379 LGALS3P17931 250 aaKnown RBP9.55□□□□□ -0.88
UBE4B-206ENST00000466379 IGHV4-28A0A0C4DH34 117 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 WIPF1O43516 503 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 VAMP3Q15836 100 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 TRAV8-3A0A0A6YYJ7 113 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 LEPROTO15243 131 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 UBE2D1P51668 147 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 PRIMA1Q86XR5 153 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 C3orf56Q8N813 242 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 TM2D2Q9BX73 214 aa9.54□□□□□ -0.88
UBE4B-206ENST00000466379 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
UBE4B-206ENST00000466379 H3BRM9 83 aa9.53□□□□□ -0.88
UBE4B-206ENST00000466379 KRTAP10-11P60412 298 aa9.53□□□□□ -0.88
UBE4B-206ENST00000466379 TMEM243Q9BU79 118 aa9.53□□□□□ -0.88
UBE4B-206ENST00000466379 TIMM21Q9BVV7 248 aa9.53□□□□□ -0.88
UBE4B-206ENST00000466379 TINCRA0A1B0GVN0 87 aa9.53□□□□□ -0.88
UBE4B-206ENST00000466379 GTSF1LQ9H1H1 148 aa9.53□□□□□ -0.88
UBE4B-206ENST00000466379 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
UBE4B-206ENST00000466379 A0A0J9YY99 117 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 A8MZ25 164 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 UBE2L6O14933 153 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 SPINK8P0C7L1 97 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 TAL2Q16559 108 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 GYPEP15421 78 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 COX6A2Q02221 97 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 AMMECR1LQ6DCA0 310 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 GEMIN7Q9H840 131 aaKnown RBP9.52□□□□□ -0.89
UBE4B-206ENST00000466379 CELA1Q9UNI1 258 aa9.52□□□□□ -0.89
UBE4B-206ENST00000466379 H3BUT2 72 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 CCL25O15444 150 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 SMIM13P0DJ93 91 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 GAGE6Q13070 117 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 CMYA5Q8N3K9 4069 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 A0A096LPF7 62 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 TRAV13-1A0A0B4J241 112 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 C9orf118A6NHY6 69 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 LYRM9A8MSI8 78 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 Q8NAQ8 132 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 OR5A1Q8NGJ0 315 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 CDKN2A-AS1Q9UH64 79 aa9.51□□□□□ -0.89
UBE4B-206ENST00000466379 STAB1Q9NY15 2570 aa9.5□□□□□ -0.89
UBE4B-206ENST00000466379 SRSF9Q13242 221 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBE4B-206ENST00000466379 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
UBE4B-206ENST00000466379 TRBV6-8A0A0A6YYG3 113 aa9.49□□□□□ -0.89
UBE4B-206ENST00000466379 UBE2V1Q13404 147 aa9.49□□□□□ -0.89
UBE4B-206ENST00000466379 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
UBE4B-206ENST00000466379 IGHV1-58A0A0C4DH39 117 aa9.49□□□□□ -0.89
UBE4B-206ENST00000466379 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
UBE4B-206ENST00000466379 RNF183Q96D59 192 aa9.49□□□□□ -0.89
UBE4B-206ENST00000466379 C10orf126Q8N4M7 172 aa9.48□□□□□ -0.89
UBE4B-206ENST00000466379 TMEM101Q96IK0 257 aa9.48□□□□□ -0.89
UBE4B-206ENST00000466379 CHCHD5Q9BSY4 110 aa9.48□□□□□ -0.89
UBE4B-206ENST00000466379 DAD1P61803 113 aa9.48□□□□□ -0.89
UBE4B-206ENST00000466379 C12orf74Q32Q52 190 aa9.48□□□□□ -0.89
UBE4B-206ENST00000466379 VSIG2Q96IQ7 327 aa9.48□□□□□ -0.89
UBE4B-206ENST00000466379 RETNQ9HD89 108 aa9.48□□□□□ -0.89
UBE4B-206ENST00000466379 PRO0255Q9UI72 69 aa9.48□□□□□ -0.89
UBE4B-206ENST00000466379 MIFP14174 115 aa9.47□□□□□ -0.89
UBE4B-206ENST00000466379 TIRAPP58753 221 aa9.47□□□□□ -0.89
UBE4B-206ENST00000466379 ATP6V0E2Q8NHE4 81 aa9.47□□□□□ -0.89
UBE4B-206ENST00000466379 IGLV4-60A0A075B6I1 120 aa9.47□□□□□ -0.89
UBE4B-206ENST00000466379 IGKV3OR2-268A0A0C4DH90 116 aa9.47□□□□□ -0.89
UBE4B-206ENST00000466379 PAX4O43316 350 aa9.47□□□□□ -0.89
UBE4B-206ENST00000466379 PKD1L1Q8TDX9 2849 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 IGLV5-45A0A087WSX0 123 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 A0A0J9YXY3 114 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 IGHV3-30P01768 117 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 IGHV3-30-5P0DP03 117 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 HTN3P15516 51 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 HERVK_113P63121 156 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 SMAGPQ0VAQ4 97 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-206ENST00000466379 MAST4O15021 2626 aa9.45□□□□□ -0.9
UBE4B-206ENST00000466379 G3V4G9 280 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms