RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 PLA2G2AP14555 144 aa11.82□□□□□ -0.52
SLX4-202ENST00000466154 NDUFA12Q9UI09 145 aa11.82□□□□□ -0.52
SLX4-202ENST00000466154 TRAV13-1A0A0B4J241 112 aa11.82□□□□□ -0.52
SLX4-202ENST00000466154 IGKV3OR2-268A0A0C4DH90 116 aa11.82□□□□□ -0.52
SLX4-202ENST00000466154 UBE2D4Q9Y2X8 147 aa11.82□□□□□ -0.52
SLX4-202ENST00000466154 TCL1BO95988 128 aa11.81□□□□□ -0.52
SLX4-202ENST00000466154 A0A0J9YXY3 114 aa11.81□□□□□ -0.52
SLX4-202ENST00000466154 J3QR89 54 aa11.81□□□□□ -0.52
SLX4-202ENST00000466154 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
SLX4-202ENST00000466154 TRGV2A0A075B6R0 118 aa11.8□□□□□ -0.52
SLX4-202ENST00000466154 GAGE7O76087 117 aa11.8□□□□□ -0.52
SLX4-202ENST00000466154 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
SLX4-202ENST00000466154 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
SLX4-202ENST00000466154 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
SLX4-202ENST00000466154 CDKN2A-AS1Q9UH64 79 aa11.79□□□□□ -0.52
SLX4-202ENST00000466154 LINC01006Q8NI28 216 aa11.79□□□□□ -0.52
SLX4-202ENST00000466154 SMR3AQ99954 134 aa11.79□□□□□ -0.52
SLX4-202ENST00000466154 PRO0461Q9UI25 63 aa11.79□□□□□ -0.52
SLX4-202ENST00000466154 ERG28Q9UKR5 140 aa11.79□□□□□ -0.52
SLX4-202ENST00000466154 LINC00694P0DN24 101 aa11.78□□□□□ -0.52
SLX4-202ENST00000466154 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
SLX4-202ENST00000466154 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
SLX4-202ENST00000466154 GCN1Q92616 2671 aaKnown RBP11.78□□□□□ -0.52
SLX4-202ENST00000466154 ADAMTSL4-AS1Q5T5F5 129 aa11.77□□□□□ -0.52
SLX4-202ENST00000466154 SMCPP49901 116 aaPredicted RBP11.77□□□□□ -0.53
SLX4-202ENST00000466154 IGHV1-58A0A0C4DH39 117 aa11.77□□□□□ -0.53
SLX4-202ENST00000466154 RS1O15537 224 aa11.77□□□□□ -0.53
SLX4-202ENST00000466154 A8MTW9 85 aa11.76□□□□□ -0.53
SLX4-202ENST00000466154 RPL36AP83881 106 aaKnown RBP11.76□□□□□ -0.53
SLX4-202ENST00000466154 LYRM7Q5U5X0 104 aa11.76□□□□□ -0.53
SLX4-202ENST00000466154 RPL36ALQ969Q0 106 aaKnown RBP11.76□□□□□ -0.53
SLX4-202ENST00000466154 SPANXA1Q9NS26 97 aa11.76□□□□□ -0.53
SLX4-202ENST00000466154 EIF4EBP3O60516 100 aaPredicted RBP11.76□□□□□ -0.53
SLX4-202ENST00000466154 LOC100131303A0A0U1RQF7 123 aa11.75□□□□□ -0.53
SLX4-202ENST00000466154 COX6A2Q02221 97 aa11.75□□□□□ -0.53
SLX4-202ENST00000466154 UNC79Q9P2D8 2635 aa11.75□□□□□ -0.53
SLX4-202ENST00000466154 C9JAW5 83 aa11.75□□□□□ -0.53
SLX4-202ENST00000466154 TMEM86BQ8N661 226 aa11.75□□□□□ -0.53
SLX4-202ENST00000466154 UBE2D3P61077 147 aa11.74□□□□□ -0.53
SLX4-202ENST00000466154 UBE2D2P62837 147 aa11.74□□□□□ -0.53
SLX4-202ENST00000466154 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.74□□□□□ -0.53
SLX4-202ENST00000466154 VSIG2Q96IQ7 327 aa11.74□□□□□ -0.53
SLX4-202ENST00000466154 TINCRA0A1B0GVN0 87 aa11.73□□□□□ -0.53
SLX4-202ENST00000466154 BEAN1Q3B7T3 259 aa11.73□□□□□ -0.53
SLX4-202ENST00000466154 K7EQD1 137 aa11.73□□□□□ -0.53
SLX4-202ENST00000466154 IGHV3-33P01772 117 aa11.73□□□□□ -0.53
SLX4-202ENST00000466154 TMEM263Q8WUH6 116 aaKnown RBP11.73□□□□□ -0.53
SLX4-202ENST00000466154 PDZD2O15018 2839 aa11.72□□□□□ -0.53
SLX4-202ENST00000466154 UBE2L6O14933 153 aa11.72□□□□□ -0.53
SLX4-202ENST00000466154 FHL3Q13643 280 aa11.72□□□□□ -0.53
SLX4-202ENST00000466154 CFAP161Q6P656 301 aa11.72□□□□□ -0.53
SLX4-202ENST00000466154 DNAJC30Q96LL9 226 aa11.72□□□□□ -0.53
SLX4-202ENST00000466154 FOXI1Q12951 378 aa11.71□□□□□ -0.53
SLX4-202ENST00000466154 C1QTNF4Q9BXJ3 329 aa11.71□□□□□ -0.53
SLX4-202ENST00000466154 TRGV4A0A0C4DH28 118 aa11.71□□□□□ -0.53
SLX4-202ENST00000466154 TRAV25A0A0B4J276 109 aa11.71□□□□□ -0.54
SLX4-202ENST00000466154 DEFB130BP0DP73 79 aa11.71□□□□□ -0.54
SLX4-202ENST00000466154 DEFB130AP0DP74 79 aa11.71□□□□□ -0.54
SLX4-202ENST00000466154 Q9H8V8 135 aa11.71□□□□□ -0.54
SLX4-202ENST00000466154 NTM-AS1Q6ZSK4 140 aa11.7□□□□□ -0.54
SLX4-202ENST00000466154 TMEM101Q96IK0 257 aa11.7□□□□□ -0.54
SLX4-202ENST00000466154 EDA2RQ9HAV5 297 aa11.7□□□□□ -0.54
SLX4-202ENST00000466154 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.7□□□□□ -0.54
SLX4-202ENST00000466154 B5MCH6 92 aa11.69□□□□□ -0.54
SLX4-202ENST00000466154 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
SLX4-202ENST00000466154 RNF183Q96D59 192 aa11.69□□□□□ -0.54
SLX4-202ENST00000466154 TRBV20-1A0A075B6N2 111 aa11.69□□□□□ -0.54
SLX4-202ENST00000466154 MEIG1Q5JSS6 88 aa11.69□□□□□ -0.54
SLX4-202ENST00000466154 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
SLX4-202ENST00000466154 ANKRD29Q8N6D5 301 aa11.69□□□□□ -0.54
SLX4-202ENST00000466154 SLC25A20O43772 301 aa11.68□□□□□ -0.54
SLX4-202ENST00000466154 GAGE6Q13070 117 aa11.68□□□□□ -0.54
SLX4-202ENST00000466154 TOMM7Q9P0U1 55 aa11.68□□□□□ -0.54
SLX4-202ENST00000466154 PIK3CD-AS1Q5SR53 167 aa11.68□□□□□ -0.54
SLX4-202ENST00000466154 LITAFQ99732 161 aa11.68□□□□□ -0.54
SLX4-202ENST00000466154 TRIAP1O43715 76 aa11.67□□□□□ -0.54
SLX4-202ENST00000466154 PF4P02776 101 aa11.67□□□□□ -0.54
SLX4-202ENST00000466154 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
SLX4-202ENST00000466154 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
SLX4-202ENST00000466154 MT-ATP8P03928 68 aa11.67□□□□□ -0.54
SLX4-202ENST00000466154 KRTAP1-1Q07627 177 aa11.67□□□□□ -0.54
SLX4-202ENST00000466154 VWFP04275 2813 aa11.66□□□□□ -0.54
SLX4-202ENST00000466154 TRAV4A0A0B4J268 109 aa11.66□□□□□ -0.54
SLX4-202ENST00000466154 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
SLX4-202ENST00000466154 MIAQ16674 131 aa11.66□□□□□ -0.54
SLX4-202ENST00000466154 PRIMA1Q86XR5 153 aa11.66□□□□□ -0.54
SLX4-202ENST00000466154 CLEC2BQ92478 149 aa11.66□□□□□ -0.54
SLX4-202ENST00000466154 A0A096LPF7 62 aa11.65□□□□□ -0.54
SLX4-202ENST00000466154 ZFAND6Q6FIF0 208 aa11.65□□□□□ -0.54
SLX4-202ENST00000466154 RNASE1P07998 156 aaKnown RBP11.65□□□□□ -0.54
SLX4-202ENST00000466154 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.54
SLX4-202ENST00000466154 TEN1Q86WV5 123 aa11.65□□□□□ -0.54
SLX4-202ENST00000466154 CARD19Q96LW7 228 aa11.65□□□□□ -0.54
SLX4-202ENST00000466154 HERVK_113P63121 156 aa11.64□□□□□ -0.55
SLX4-202ENST00000466154 CIRBPQ14011 172 aaKnown RBP11.64□□□□□ -0.55
SLX4-202ENST00000466154 CHCHD5Q9BSY4 110 aa11.64□□□□□ -0.55
SLX4-202ENST00000466154 HERV-K104P63124 156 aa11.64□□□□□ -0.55
SLX4-202ENST00000466154 TMEM243Q9BU79 118 aa11.64□□□□□ -0.55
SLX4-202ENST00000466154 DAZ2Q13117 558 aaKnown RBP11.64□□□□□ -0.55
SLX4-202ENST00000466154 DAZ4Q86SG3 579 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms