RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
VAPB-203ENST00000463370 PRIMA1Q86XR5 153 aa9.04□□□□□ -0.96
VAPB-203ENST00000463370 KIR2DL5BQ8NHK3 375 aa9.04□□□□□ -0.96
VAPB-203ENST00000463370 HERVK_113P61574 105 aa9.03□□□□□ -0.96
VAPB-203ENST00000463370 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
VAPB-203ENST00000463370 SBSPONQ8IVN8 264 aa9.03□□□□□ -0.96
VAPB-203ENST00000463370 KRTAP10-11P60412 298 aa9.02□□□□□ -0.96
VAPB-203ENST00000463370 FAM222AQ5U5X8 452 aa9.02□□□□□ -0.96
VAPB-203ENST00000463370 CRYBA4P53673 196 aa9.02□□□□□ -0.97
VAPB-203ENST00000463370 CEND1Q8N111 149 aa9.02□□□□□ -0.97
VAPB-203ENST00000463370 IGHV4-28A0A0C4DH34 117 aa9.01□□□□□ -0.97
VAPB-203ENST00000463370 SMIM9A6NGZ8 99 aa9.01□□□□□ -0.97
VAPB-203ENST00000463370 K7ERJ3 54 aa9.01□□□□□ -0.97
VAPB-203ENST00000463370 APOC4P55056 127 aa9.01□□□□□ -0.97
VAPB-203ENST00000463370 NAA38Q9BRA0 125 aaKnown RBP9.01□□□□□ -0.97
VAPB-203ENST00000463370 J3QQQ9 107 aa9.01□□□□□ -0.97
VAPB-203ENST00000463370 HIST1H4GQ99525 98 aa9.01□□□□□ -0.97
VAPB-203ENST00000463370 TM2D2Q9BX73 214 aa9.01□□□□□ -0.97
VAPB-203ENST00000463370 TRAV8-3A0A0A6YYJ7 113 aa9□□□□□ -0.97
VAPB-203ENST00000463370 CIDEAO60543 219 aa9□□□□□ -0.97
VAPB-203ENST00000463370 UBE2D1P51668 147 aa9□□□□□ -0.97
VAPB-203ENST00000463370 DGAT2L7PQ6IED9 249 aa9□□□□□ -0.97
VAPB-203ENST00000463370 RAB37Q96AX2 223 aa9□□□□□ -0.97
VAPB-203ENST00000463370 A6NDN8 102 aa9□□□□□ -0.97
VAPB-203ENST00000463370 A8MZ25 164 aa9□□□□□ -0.97
VAPB-203ENST00000463370 SCGB1D4Q6XE38 83 aa9□□□□□ -0.97
VAPB-203ENST00000463370 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
VAPB-203ENST00000463370 TINCRA0A1B0GVN0 87 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 GTSF1LQ9H1H1 148 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 A0A0J9YY99 117 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 LEPROTO15243 131 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 PTTG1IPP53801 180 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 COX6A2Q02221 97 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 Q8NAQ8 132 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 COL6A5A8TX70 2615 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 DNAH3Q8TD57 4116 aa8.99□□□□□ -0.97
VAPB-203ENST00000463370 TMEM243Q9BU79 118 aa8.98□□□□□ -0.97
VAPB-203ENST00000463370 NHP2Q9NX24 153 aaKnown RBP8.98□□□□□ -0.97
VAPB-203ENST00000463370 H3BRM9 83 aa8.98□□□□□ -0.97
VAPB-203ENST00000463370 CCL25O15444 150 aa8.98□□□□□ -0.97
VAPB-203ENST00000463370 SPINK8P0C7L1 97 aa8.98□□□□□ -0.97
VAPB-203ENST00000463370 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
VAPB-203ENST00000463370 LGALS3P17931 250 aaKnown RBP8.98□□□□□ -0.97
VAPB-203ENST00000463370 CDC42SE2Q9NRR3 84 aa8.98□□□□□ -0.97
VAPB-203ENST00000463370 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
VAPB-203ENST00000463370 GYPEP15421 78 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 VAMP3Q15836 100 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 A0A096LPF7 62 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 LYRM9A8MSI8 78 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 GAGE6Q13070 117 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 TAL2Q16559 108 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 LINC00242Q5T6M2 205 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 AMMECR1LQ6DCA0 310 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 RNF183Q96D59 192 aa8.97□□□□□ -0.97
VAPB-203ENST00000463370 CSDC2Q9Y534 153 aaKnown RBP8.97□□□□□ -0.97
VAPB-203ENST00000463370 TRBV6-8A0A0A6YYG3 113 aa8.96□□□□□ -0.98
VAPB-203ENST00000463370 H3BUT2 72 aa8.96□□□□□ -0.98
VAPB-203ENST00000463370 C10orf126Q8N4M7 172 aa8.96□□□□□ -0.98
VAPB-203ENST00000463370 C9orf118A6NHY6 69 aa8.95□□□□□ -0.98
VAPB-203ENST00000463370 UBE2L6O14933 153 aa8.95□□□□□ -0.98
VAPB-203ENST00000463370 OR5A1Q8NGJ0 315 aa8.95□□□□□ -0.98
VAPB-203ENST00000463370 GEMIN7Q9H840 131 aaKnown RBP8.95□□□□□ -0.98
VAPB-203ENST00000463370 IGHV1-58A0A0C4DH39 117 aa8.95□□□□□ -0.98
VAPB-203ENST00000463370 SMIM13P0DJ93 91 aa8.95□□□□□ -0.98
VAPB-203ENST00000463370 UBE2V1Q13404 147 aa8.95□□□□□ -0.98
VAPB-203ENST00000463370 PRO0255Q9UI72 69 aa8.95□□□□□ -0.98
VAPB-203ENST00000463370 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
VAPB-203ENST00000463370 SHISA2Q6UWI4 295 aa8.94□□□□□ -0.98
VAPB-203ENST00000463370 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
VAPB-203ENST00000463370 RETNQ9HD89 108 aa8.94□□□□□ -0.98
VAPB-203ENST00000463370 IGLV5-45A0A087WSX0 123 aa8.94□□□□□ -0.98
VAPB-203ENST00000463370 MIFP14174 115 aa8.94□□□□□ -0.98
VAPB-203ENST00000463370 SRSF9Q13242 221 aaKnown RBP eCLIP8.94□□□□□ -0.98
VAPB-203ENST00000463370 TIRAPP58753 221 aa8.93□□□□□ -0.98
VAPB-203ENST00000463370 C12orf74Q32Q52 190 aa8.93□□□□□ -0.98
VAPB-203ENST00000463370 CHCHD5Q9BSY4 110 aa8.93□□□□□ -0.98
VAPB-203ENST00000463370 G3V4G9 280 aa8.93□□□□□ -0.98
VAPB-203ENST00000463370 DAD1P61803 113 aa8.93□□□□□ -0.98
VAPB-203ENST00000463370 EGFEM1PQ0D2K5 195 aa8.93□□□□□ -0.98
VAPB-203ENST00000463370 ATP6V0E2Q8NHE4 81 aa8.93□□□□□ -0.98
VAPB-203ENST00000463370 PAX4O43316 350 aa8.92□□□□□ -0.98
VAPB-203ENST00000463370 NOTCH1P46531 2555 aa8.92□□□□□ -0.98
VAPB-203ENST00000463370 A0A0J9YXY3 114 aa8.92□□□□□ -0.98
VAPB-203ENST00000463370 IGHV3-30P01768 117 aa8.92□□□□□ -0.98
VAPB-203ENST00000463370 IGHV3-30-5P0DP03 117 aa8.92□□□□□ -0.98
VAPB-203ENST00000463370 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
VAPB-203ENST00000463370 IGKV3OR2-268A0A0C4DH90 116 aa8.91□□□□□ -0.98
VAPB-203ENST00000463370 FAM19A3Q7Z5A8 133 aa8.91□□□□□ -0.98
VAPB-203ENST00000463370 TRAV26-1A0A087WT03 109 aa8.91□□□□□ -0.98
VAPB-203ENST00000463370 HERVK_113P63121 156 aa8.91□□□□□ -0.98
VAPB-203ENST00000463370 SPANXB1Q9NS25 103 aaPredicted RBP8.91□□□□□ -0.98
VAPB-203ENST00000463370 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
VAPB-203ENST00000463370 A0A1B0GWB2 263 aa8.9□□□□□ -0.98
VAPB-203ENST00000463370 H7C423 109 aa8.9□□□□□ -0.98
VAPB-203ENST00000463370 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
VAPB-203ENST00000463370 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
VAPB-203ENST00000463370 A0A1W2PPM0 123 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms