RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 RPL39P62891 51 aaKnown RBP6.42□□□□□ -1.38
SHQ1-203ENST00000463369 PRR9Q5T870 116 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 BRD3OSQ6XYD6 125 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 METTL26Q96S19 204 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 PHLDA3Q9Y5J5 127 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 ICOSQ9Y6W8 199 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 MXRA5Q9NR99 2828 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 TLN2Q9Y4G6 2542 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 NOTCH2Q04721 2471 aa6.42□□□□□ -1.38
SHQ1-203ENST00000463369 IGHV4OR15-8A0A075B7B6 117 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 A0A087WW49 117 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 A0A1B0GX51 115 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 SDHAF1A6NFY7 115 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 ACYP1P07311 99 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 COX6CP09669 75 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 S100A4P26447 101 aaKnown RBP6.41□□□□□ -1.38
SHQ1-203ENST00000463369 POLR2KP53803 58 aaKnown RBP6.41□□□□□ -1.38
SHQ1-203ENST00000463369 HERVK_113P63121 156 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 CEMP1Q6PRD7 247 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-203ENST00000463369 LINC00477Q96M19 166 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 IGHV3-66A0A0C4DH42 116 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 J3KT08 172 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 LENEPQ9Y5L5 61 aa6.41□□□□□ -1.38
SHQ1-203ENST00000463369 ANK3Q12955 4377 aaKnown RBP6.4□□□□□ -1.38
SHQ1-203ENST00000463369 A0A0J9YXY3 114 aa6.4□□□□□ -1.38
SHQ1-203ENST00000463369 CLPSL1A2RUU4 121 aa6.4□□□□□ -1.38
SHQ1-203ENST00000463369 MED14OSP0DP75 135 aa6.4□□□□□ -1.38
SHQ1-203ENST00000463369 NDPQ00604 133 aa6.4□□□□□ -1.38
SHQ1-203ENST00000463369 TRAV21A0A0B4J279 112 aa6.4□□□□□ -1.39
SHQ1-203ENST00000463369 LST1O00453 97 aa6.4□□□□□ -1.39
SHQ1-203ENST00000463369 ATP5G1P05496 136 aa6.4□□□□□ -1.39
SHQ1-203ENST00000463369 LINC00315P59091 139 aa6.4□□□□□ -1.39
SHQ1-203ENST00000463369 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.39
SHQ1-203ENST00000463369 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.39
SHQ1-203ENST00000463369 SPANXCQ9NY87 97 aa6.4□□□□□ -1.39
SHQ1-203ENST00000463369 KIF25-AS1Q9Y6Z4 181 aa6.4□□□□□ -1.39
SHQ1-203ENST00000463369 A0A087WZ39 114 aa6.39□□□□□ -1.39
SHQ1-203ENST00000463369 Q8N6K4 173 aa6.39□□□□□ -1.39
SHQ1-203ENST00000463369 DEFB104AQ8WTQ1 72 aa6.39□□□□□ -1.39
SHQ1-203ENST00000463369 CLEC2BQ92478 149 aa6.39□□□□□ -1.39
SHQ1-203ENST00000463369 PKIGQ9Y2B9 76 aa6.39□□□□□ -1.39
SHQ1-203ENST00000463369 IGHV3OR16-13A0A075B7E8 117 aa6.38□□□□□ -1.39
SHQ1-203ENST00000463369 IGHV3-74A0A0B4J1X5 117 aa6.38□□□□□ -1.39
SHQ1-203ENST00000463369 LINC00643Q86TS7 51 aa6.38□□□□□ -1.39
SHQ1-203ENST00000463369 ZFAND2AQ8N6M9 145 aa6.38□□□□□ -1.39
SHQ1-203ENST00000463369 LITAFQ99732 161 aa6.38□□□□□ -1.39
SHQ1-203ENST00000463369 SETXQ7Z333 2677 aaKnown RBP6.38□□□□□ -1.39
SHQ1-203ENST00000463369 IGHV3-64A0A075B6Q5 118 aa6.38□□□□□ -1.39
SHQ1-203ENST00000463369 RNASE3P12724 160 aaKnown RBP6.38□□□□□ -1.39
SHQ1-203ENST00000463369 Q6ZVQ6 151 aa6.38□□□□□ -1.39
SHQ1-203ENST00000463369 LINC00527Q9UJ94 153 aa6.38□□□□□ -1.39
SHQ1-203ENST00000463369 ZNF256Q9Y2P7 627 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-203ENST00000463369 KLK5Q9Y337 293 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-203ENST00000463369 SONP18583 2426 aaKnown RBP6.37□□□□□ -1.39
SHQ1-203ENST00000463369 TRBV27A0A0K0K1C4 114 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 I3L3M4 83 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 GNRH2O43555 120 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 NXPH4O95158 308 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 LY6G6DO95868 133 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 PRSS2P07478 247 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 DEFB112Q30KQ8 113 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 SMCR5Q8TEV8 140 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 OPRPNQ99935 248 aaPredicted RBP6.37□□□□□ -1.39
SHQ1-203ENST00000463369 SMR3AQ99954 134 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 HIVEP1P15822 2718 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 CYSRT1A8MQ03 144 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 COX7CP15954 63 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 C15orf32Q32M92 178 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 SUMO4Q6EEV6 95 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 Q6YL49 198 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 SDIM1Q6ZPB5 146 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 TMEM219Q86XT9 240 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 DCANP1Q8TF63 244 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 ESM1Q9NQ30 184 aa6.37□□□□□ -1.39
SHQ1-203ENST00000463369 MUC4Q99102 2169 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 IGHV3-49A0A0A0MS15 119 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 TRAV8-3A0A0A6YYJ7 113 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 LYRM9A8MSI8 78 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 H3BUX3 64 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 CRYGAP11844 174 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 CXCL5P42830 114 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 ADAMTSL4-AS1Q5T5F5 129 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 C2orf48Q96LS8 159 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 ZNF580Q9UK33 172 aa6.36□□□□□ -1.39
SHQ1-203ENST00000463369 A0A0J9YXV3 536 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 IGHV3-30-3P0DP02 117 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 Q6ZSV7 163 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 IGHV7-81A0A0B4J1V7 117 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 A6NDX4 124 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 RNASE4P34096 147 aaKnown RBP6.35□□□□□ -1.39
SHQ1-203ENST00000463369 RPL18AQ02543 176 aaKnown RBP6.35□□□□□ -1.39
SHQ1-203ENST00000463369 KLK9Q2XQG4 91 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 Q8N9W7 124 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 Q9HAA7 133 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 KLK9Q9UKQ9 250 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 HIVEP2P31629 2446 aa6.35□□□□□ -1.39
SHQ1-203ENST00000463369 CUBNO60494 3623 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms