RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 DSCAML1Q8TD84 2053 aa2.57□□□□□ -2
UBA3-204ENST00000461522 TRBV24-1A0A075B6N3 115 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TRAV12-2A0A075B6T6 113 aa2.56□□□□□ -2
UBA3-204ENST00000461522 IGLC7A0M8Q6 106 aa2.56□□□□□ -2
UBA3-204ENST00000461522 NDUFC2-KCTD14E9PQ53 114 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TMEM256-PLSCR3K7ERE1 68 aa2.56□□□□□ -2
UBA3-204ENST00000461522 PITX3O75364 302 aa2.56□□□□□ -2
UBA3-204ENST00000461522 SFT2D2O95562 160 aa2.56□□□□□ -2
UBA3-204ENST00000461522 IGKV1D-33P01593 117 aa2.56□□□□□ -2
UBA3-204ENST00000461522 IGKV1-33P01594 117 aa2.56□□□□□ -2
UBA3-204ENST00000461522 IGHV3-23P01764 117 aa2.56□□□□□ -2
UBA3-204ENST00000461522 IGHV3-7P01780 117 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TCRAP04437 139 aa2.56□□□□□ -2
UBA3-204ENST00000461522 SRP19P09132 144 aaKnown RBP2.56□□□□□ -2
UBA3-204ENST00000461522 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
UBA3-204ENST00000461522 FXYD4P59646 89 aa2.56□□□□□ -2
UBA3-204ENST00000461522 HERVK_113P61574 105 aa2.56□□□□□ -2
UBA3-204ENST00000461522 RPL30P62888 115 aaKnown RBP2.56□□□□□ -2
UBA3-204ENST00000461522 SUPT4H1P63272 117 aaKnown RBP2.56□□□□□ -2
UBA3-204ENST00000461522 REG3AQ06141 175 aa2.56□□□□□ -2
UBA3-204ENST00000461522 ELOBQ15370 118 aa2.56□□□□□ -2
UBA3-204ENST00000461522 NMSQ5H8A3 153 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TMEM61Q8N0U2 210 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TMEM252Q8N6L7 170 aa2.56□□□□□ -2
UBA3-204ENST00000461522 NKAPP1Q8N9T2 125 aa2.56□□□□□ -2
UBA3-204ENST00000461522 OR5C1Q8NGR4 320 aa2.56□□□□□ -2
UBA3-204ENST00000461522 UBALD1Q8TB05 177 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TVP23CQ96ET8 276 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TIMM17AQ99595 171 aa2.56□□□□□ -2
UBA3-204ENST00000461522 PMCHL2Q9BQD1 86 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TMEM14BQ9NUH8 114 aa2.56□□□□□ -2
UBA3-204ENST00000461522 TMEM242Q9NWH2 141 aa2.56□□□□□ -2
UBA3-204ENST00000461522 COL6A5A8TX70 2615 aa2.55□□□□□ -2
UBA3-204ENST00000461522 NF1P21359 2839 aa2.55□□□□□ -2
UBA3-204ENST00000461522 IGHV7-81A0A0B4J1V7 117 aa2.55□□□□□ -2
UBA3-204ENST00000461522 CLPSL1A2RUU4 121 aa2.55□□□□□ -2
UBA3-204ENST00000461522 M0R378 163 aa2.55□□□□□ -2
UBA3-204ENST00000461522 IGKV1-5P01602 117 aa2.55□□□□□ -2
UBA3-204ENST00000461522 TRACP01848 142 aa2.55□□□□□ -2
UBA3-204ENST00000461522 MT-ATP8P03928 68 aa2.55□□□□□ -2
UBA3-204ENST00000461522 CXCL1P09341 107 aa2.55□□□□□ -2
UBA3-204ENST00000461522 CRYGAP11844 174 aa2.55□□□□□ -2
UBA3-204ENST00000461522 HLA-DRB4P13762 266 aa2.55□□□□□ -2
UBA3-204ENST00000461522 S100A4P26447 101 aaKnown RBP2.55□□□□□ -2
UBA3-204ENST00000461522 BLCAPP62952 87 aa2.55□□□□□ -2
UBA3-204ENST00000461522 UBE2BP63146 152 aa2.55□□□□□ -2
UBA3-204ENST00000461522 Q0VG73 95 aa2.55□□□□□ -2
UBA3-204ENST00000461522 ORMDL2Q53FV1 153 aa2.55□□□□□ -2
UBA3-204ENST00000461522 LINC01545Q5VT33 79 aa2.55□□□□□ -2
UBA3-204ENST00000461522 MYOZ3Q8TDC0 251 aa2.55□□□□□ -2
UBA3-204ENST00000461522 USMG5Q96IX5 58 aa2.55□□□□□ -2
UBA3-204ENST00000461522 AGPAT4-IT1Q9H0P7 198 aa2.55□□□□□ -2
UBA3-204ENST00000461522 ST20Q9HBF5 79 aa2.55□□□□□ -2
UBA3-204ENST00000461522 NDUFA4L2Q9NRX3 87 aa2.55□□□□□ -2
UBA3-204ENST00000461522 C21orf62Q9NYP8 219 aa2.55□□□□□ -2
UBA3-204ENST00000461522 TP73-AS1Q9UF72 201 aa2.55□□□□□ -2
UBA3-204ENST00000461522 F11RQ9Y624 299 aaKnown RBP2.55□□□□□ -2
UBA3-204ENST00000461522 HLA-DRB4X5D2U9 266 aa2.55□□□□□ -2
UBA3-204ENST00000461522 TNCP24821 2201 aa2.54□□□□□ -2
UBA3-204ENST00000461522 IGHV3-72A0A0B4J1Y9 119 aa2.54□□□□□ -2
UBA3-204ENST00000461522 TRBV27A0A0K0K1C4 114 aa2.54□□□□□ -2
UBA3-204ENST00000461522 MDFIC2A0A1B0GVS7 189 aa2.54□□□□□ -2
UBA3-204ENST00000461522 C17orf112F2Z3M2 114 aa2.54□□□□□ -2
UBA3-204ENST00000461522 HYPMO75409 117 aa2.54□□□□□ -2
UBA3-204ENST00000461522 SNCGO76070 127 aa2.54□□□□□ -2
UBA3-204ENST00000461522 IGKV1-39P01597 117 aa2.54□□□□□ -2
UBA3-204ENST00000461522 IGKV1D-39P04432 117 aa2.54□□□□□ -2
UBA3-204ENST00000461522 SAA1P0DJI8 122 aaPredicted RBP2.54□□□□□ -2
UBA3-204ENST00000461522 INAFM2P0DMQ5 153 aa2.54□□□□□ -2
UBA3-204ENST00000461522 IGLC2P0DOY2 106 aa2.54□□□□□ -2
UBA3-204ENST00000461522 IGLC3P0DOY3 106 aa2.54□□□□□ -2
UBA3-204ENST00000461522 ZNF80P51504 273 aaPredicted RBP2.54□□□□□ -2
UBA3-204ENST00000461522 HBBP68871 147 aa2.54□□□□□ -2
UBA3-204ENST00000461522 ERHP84090 104 aaKnown RBP2.54□□□□□ -2
UBA3-204ENST00000461522 PRCDQ00LT1 54 aa2.54□□□□□ -2
UBA3-204ENST00000461522 PRB3Q04118 309 aaPredicted RBP2.54□□□□□ -2
UBA3-204ENST00000461522 FXYD3Q14802 87 aa2.54□□□□□ -2
UBA3-204ENST00000461522 DPPA3Q6W0C5 159 aa2.54□□□□□ -2
UBA3-204ENST00000461522 TEN1Q86WV5 123 aa2.54□□□□□ -2
UBA3-204ENST00000461522 BPIFA4PQ86YQ2 179 aa2.54□□□□□ -2
UBA3-204ENST00000461522 RBMXL1Q96E39 390 aaKnown RBP2.54□□□□□ -2
UBA3-204ENST00000461522 SLC39A9Q9NUM3 307 aa2.54□□□□□ -2
UBA3-204ENST00000461522 ZNF492Q9P255 531 aa2.54□□□□□ -2
UBA3-204ENST00000461522 KLK12Q9UKR0 248 aa2.54□□□□□ -2
UBA3-204ENST00000461522 SERP1Q9Y6X1 66 aa2.54□□□□□ -2
UBA3-204ENST00000461522 STAB1Q9NY15 2570 aa2.54□□□□□ -2
UBA3-204ENST00000461522 TRBV20-1A0A075B6N2 111 aa2.53□□□□□ -2
UBA3-204ENST00000461522 TRBV7-1A0A0A6YYK4 115 aa2.53□□□□□ -2
UBA3-204ENST00000461522 FAM24AA6NFZ4 105 aa2.53□□□□□ -2
UBA3-204ENST00000461522 FAM223BA6NKX1 122 aa2.53□□□□□ -2
UBA3-204ENST00000461522 F8W1H4 67 aa2.53□□□□□ -2
UBA3-204ENST00000461522 M0R2P5 195 aa2.53□□□□□ -2
UBA3-204ENST00000461522 SYNGR2O43760 224 aa2.53□□□□□ -2
UBA3-204ENST00000461522 LTAP01374 205 aa2.53□□□□□ -2
UBA3-204ENST00000461522 SLC25A5P05141 298 aaKnown RBP2.53□□□□□ -2
UBA3-204ENST00000461522 CD24P25063 80 aa2.53□□□□□ -2
UBA3-204ENST00000461522 RPL27AP46776 148 aaKnown RBP2.53□□□□□ -2
UBA3-204ENST00000461522 TAS2R45P59539 299 aa2.53□□□□□ -2
UBA3-204ENST00000461522 SNRPD3P62318 126 aaKnown RBP2.53□□□□□ -2
UBA3-204ENST00000461522 CCL20P78556 96 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms