RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 Q6ZRX8 168 aa1.23□□□□□ -2.21
SPTLC1-203ENST00000461132 LINC01558Q9Y6Z2 57 aa1.23□□□□□ -2.21
SPTLC1-203ENST00000461132 ARL2-SNX15V9GYD0 113 aa1.23□□□□□ -2.21
SPTLC1-203ENST00000461132 CDK13Q14004 1512 aaKnown RBP1.23□□□□□ -2.21
SPTLC1-203ENST00000461132 ANKRD36BQ8N2N9 1353 aa1.22□□□□□ -2.21
SPTLC1-203ENST00000461132 UQCRHLA0A096LP55 91 aa1.22□□□□□ -2.21
SPTLC1-203ENST00000461132 PIN1P1O15428 100 aa1.22□□□□□ -2.21
SPTLC1-203ENST00000461132 PMCHL1Q16048 86 aa1.22□□□□□ -2.21
SPTLC1-203ENST00000461132 CACFD1Q9UGQ2 172 aa1.22□□□□□ -2.21
SPTLC1-203ENST00000461132 ABCA3Q99758 1704 aa1.22□□□□□ -2.21
SPTLC1-203ENST00000461132 CNTRLQ7Z7A1 2325 aa1.22□□□□□ -2.21
SPTLC1-203ENST00000461132 DOCK11Q5JSL3 2073 aa1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 GVQW2A0A096LPI5 108 aaPredicted RBP1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 UQCRHP07919 91 aa1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 MGPP08493 103 aa1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 IGLC1P0CG04 106 aa1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 SAA2P0DJI9 122 aaPredicted RBP1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 S100A3P33764 101 aa1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 SFTA2Q6UW10 78 aa1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 PSME4Q14997 1843 aa1.21□□□□□ -2.22
SPTLC1-203ENST00000461132 PRDM15P57071 1507 aaPredicted RBP1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 TANC1Q9C0D5 1861 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 MED13LQ71F56 2210 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 ADGRL2O95490 1459 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 TRBV7-7A0A0K0K1E9 115 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 A0A1B0GWA3 101 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 SMIM11AP58511 58 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 PYY3Q5JQD4 70 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 PROK2Q9HC23 129 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 RB1CC1Q8TDY2 1594 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 PRDM2Q13029 1718 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 TOPAZ1Q8N9V7 1692 aa1.2□□□□□ -2.22
SPTLC1-203ENST00000461132 MLH3Q9UHC1 1453 aa1.19□□□□□ -2.22
SPTLC1-203ENST00000461132 RAPGEF2Q9Y4G8 1499 aa1.19□□□□□ -2.22
SPTLC1-203ENST00000461132 LOC285556D6RIA3 1793 aa1.19□□□□□ -2.22
SPTLC1-203ENST00000461132 A0A0G2JND7 137 aa1.19□□□□□ -2.22
SPTLC1-203ENST00000461132 ABCA1O95477 2261 aa1.19□□□□□ -2.22
SPTLC1-203ENST00000461132 SHROOM2Q13796 1616 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 PLEKHH2Q8IVE3 1493 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 ZNF815PA8K554 130 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 SYS1-DBNDD2H3BUS1 97 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 FAM223AQ8IWN6 122 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 C9orf62Q8N4C0 152 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 ZMYM4Q5VZL5 1548 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 SIPA1L3O60292 1781 aaPredicted RBP1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 SCRIBQ14160 1630 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 SHANK2Q9UPX8 1470 aa1.18□□□□□ -2.22
SPTLC1-203ENST00000461132 LAMC3Q9Y6N6 1575 aa1.17□□□□□ -2.22
SPTLC1-203ENST00000461132 TRBV25-1A0A075B6N4 114 aa1.17□□□□□ -2.22
SPTLC1-203ENST00000461132 PSMG4Q5JS54 123 aa1.17□□□□□ -2.22
SPTLC1-203ENST00000461132 ZNF720Q7Z2F6 126 aa1.17□□□□□ -2.22
SPTLC1-203ENST00000461132 ANKRD26Q9UPS8 1709 aa1.17□□□□□ -2.22
SPTLC1-203ENST00000461132 MAP2P11137 1827 aaKnown RBP1.17□□□□□ -2.22
SPTLC1-203ENST00000461132 TET3O43151 1660 aa1.16□□□□□ -2.22
SPTLC1-203ENST00000461132 KNTC1P50748 2209 aa1.16□□□□□ -2.22
SPTLC1-203ENST00000461132 COL6A6A6NMZ7 2263 aa1.16□□□□□ -2.22
SPTLC1-203ENST00000461132 UBE2DNLQ8IWF7 75 aa1.16□□□□□ -2.22
SPTLC1-203ENST00000461132 RABAC1Q9UI14 185 aa1.16□□□□□ -2.22
SPTLC1-203ENST00000461132 LAMA4Q16363 1823 aa1.16□□□□□ -2.22
SPTLC1-203ENST00000461132 KDM5AP29375 1690 aaKnown RBP1.16□□□□□ -2.22
SPTLC1-203ENST00000461132 MYOM1P52179 1685 aa1.16□□□□□ -2.22
SPTLC1-203ENST00000461132 ZDBF2Q9HCK1 2354 aa1.15□□□□□ -2.22
SPTLC1-203ENST00000461132 EHBP1L1Q8N3D4 1523 aa1.15□□□□□ -2.22
SPTLC1-203ENST00000461132 IFT172Q9UG01 1749 aa1.15□□□□□ -2.22
SPTLC1-203ENST00000461132 ROS1P08922 2347 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 FAM223BA6NKX1 122 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 H7BZZ5 65 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 M0R3E3 92 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 BCE1O60756 84 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 HAMPP81172 84 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 PRO1933Q9H354 126 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 DIP2CQ9Y2E4 1556 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 CHD1O14646 1710 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 TOP2BQ02880 1626 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 HMGXB3Q12766 1538 aa1.15□□□□□ -2.23
SPTLC1-203ENST00000461132 F5P12259 2224 aa1.14□□□□□ -2.23
SPTLC1-203ENST00000461132 CYB5AP00167 134 aa1.14□□□□□ -2.23
SPTLC1-203ENST00000461132 HMGN3Q15651 99 aa1.14□□□□□ -2.23
SPTLC1-203ENST00000461132 TMEM263Q8WUH6 116 aaKnown RBP1.14□□□□□ -2.23
SPTLC1-203ENST00000461132 S100A16Q96FQ6 103 aaKnown RBP1.14□□□□□ -2.23
SPTLC1-203ENST00000461132 MARF1Q9Y4F3 1742 aaKnown RBP1.14□□□□□ -2.23
SPTLC1-203ENST00000461132 LRRC37A2A6NM11 1700 aa1.13□□□□□ -2.23
SPTLC1-203ENST00000461132 C7orf77A4D0Y5 90 aa1.13□□□□□ -2.23
SPTLC1-203ENST00000461132 K7EP34 96 aa1.13□□□□□ -2.23
SPTLC1-203ENST00000461132 KRTAP10-4P60372 401 aaPredicted RBP1.13□□□□□ -2.23
SPTLC1-203ENST00000461132 PEA15Q15121 130 aa1.13□□□□□ -2.23
SPTLC1-203ENST00000461132 Q6JHZ5 121 aa1.13□□□□□ -2.23
SPTLC1-203ENST00000461132 ARHGEF12Q9NZN5 1544 aa1.13□□□□□ -2.23
SPTLC1-203ENST00000461132 KIF21AQ7Z4S6 1674 aa1.13□□□□□ -2.23
SPTLC1-203ENST00000461132 CCDC18Q5T9S5 1454 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 PLIN4Q96Q06 1357 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 ABCC2Q92887 1545 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 G3V318 75 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 NMBP08949 121 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 ETDBQ3ZM63 59 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 ALKAL2Q6UX46 152 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 LCN9Q8WX39 176 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 C20orf78Q9BR46 151 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 LINC00846Q9NV44 126 aa1.12□□□□□ -2.23
SPTLC1-203ENST00000461132 RAPGEF6Q8TEU7 1601 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms