RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CRIP2P52943 208 aaPredicted RBP10.9□□□□□ -0.66
PTPRU-205ENST00000460170 CCL18P55774 89 aa10.9□□□□□ -0.66
PTPRU-205ENST00000460170 ZNF843Q8N446 348 aa10.9□□□□□ -0.66
PTPRU-205ENST00000460170 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
PTPRU-205ENST00000460170 FAM222AQ5U5X8 452 aa10.9□□□□□ -0.66
PTPRU-205ENST00000460170 MRGPRG-AS1Q2M3A8 158 aa10.9□□□□□ -0.66
PTPRU-205ENST00000460170 IGKV3D-7A0A0C4DH55 119 aa10.89□□□□□ -0.67
PTPRU-205ENST00000460170 ETDCA0A1B0GVM5 59 aa10.89□□□□□ -0.67
PTPRU-205ENST00000460170 ABCA12Q86UK0 2595 aa10.89□□□□□ -0.67
PTPRU-205ENST00000460170 SETD2Q9BYW2 2564 aaPredicted RBP10.89□□□□□ -0.67
PTPRU-205ENST00000460170 TRBV6-4A0A1B0GX49 114 aa10.89□□□□□ -0.67
PTPRU-205ENST00000460170 C18orf65Q6ZTR6 163 aa10.89□□□□□ -0.67
PTPRU-205ENST00000460170 LINC00308Q8TCZ7 52 aa10.89□□□□□ -0.67
PTPRU-205ENST00000460170 TRAV26-1A0A087WT03 109 aa10.88□□□□□ -0.67
PTPRU-205ENST00000460170 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
PTPRU-205ENST00000460170 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
PTPRU-205ENST00000460170 LINC00269Q8N2A0 174 aa10.88□□□□□ -0.67
PTPRU-205ENST00000460170 CHD8Q9HCK8 2581 aa10.88□□□□□ -0.67
PTPRU-205ENST00000460170 LYRM9A8MSI8 78 aa10.88□□□□□ -0.67
PTPRU-205ENST00000460170 SPTBN4Q9H254 2564 aa10.88□□□□□ -0.67
PTPRU-205ENST00000460170 TRBV6-8A0A0A6YYG3 113 aa10.87□□□□□ -0.67
PTPRU-205ENST00000460170 TMEM258P61165 79 aa10.87□□□□□ -0.67
PTPRU-205ENST00000460170 H3BQ85 93 aa10.87□□□□□ -0.67
PTPRU-205ENST00000460170 COL4A2P08572 1712 aa10.87□□□□□ -0.67
PTPRU-205ENST00000460170 UBE2BP63146 152 aa10.87□□□□□ -0.67
PTPRU-205ENST00000460170 TRIAP1O43715 76 aa10.87□□□□□ -0.67
PTPRU-205ENST00000460170 TRBV30A0A0K0K1B3 111 aa10.86□□□□□ -0.67
PTPRU-205ENST00000460170 PRM2P04554 102 aa10.86□□□□□ -0.67
PTPRU-205ENST00000460170 RBX1P62877 108 aa10.86□□□□□ -0.67
PTPRU-205ENST00000460170 REG3AQ06141 175 aa10.86□□□□□ -0.67
PTPRU-205ENST00000460170 TEX49A0A1B0GTD5 131 aa10.86□□□□□ -0.67
PTPRU-205ENST00000460170 IGIPA6NJ69 53 aa10.85□□□□□ -0.67
PTPRU-205ENST00000460170 A8MZ25 164 aa10.85□□□□□ -0.67
PTPRU-205ENST00000460170 EDN2P20800 178 aa10.85□□□□□ -0.67
PTPRU-205ENST00000460170 DIRC1Q969H9 104 aa10.85□□□□□ -0.67
PTPRU-205ENST00000460170 TMEM256-PLSCR3K7ERE1 68 aa10.85□□□□□ -0.67
PTPRU-205ENST00000460170 ATOX1O00244 68 aa10.85□□□□□ -0.67
PTPRU-205ENST00000460170 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
PTPRU-205ENST00000460170 LINC01006Q8NI28 216 aa10.85□□□□□ -0.67
PTPRU-205ENST00000460170 hADV29S1A0JD25 119 aa10.84□□□□□ -0.67
PTPRU-205ENST00000460170 IBA57-AS1B1ANH7 110 aa10.84□□□□□ -0.67
PTPRU-205ENST00000460170 UBE2D4Q9Y2X8 147 aa10.84□□□□□ -0.67
PTPRU-205ENST00000460170 RAI1Q7Z5J4 1906 aaPredicted RBP10.84□□□□□ -0.67
PTPRU-205ENST00000460170 A0A096LNJ9 63 aa10.84□□□□□ -0.67
PTPRU-205ENST00000460170 PIK3CD-AS1Q5SR53 167 aa10.84□□□□□ -0.67
PTPRU-205ENST00000460170 CHCHD10Q8WYQ3 142 aaPredicted RBP10.84□□□□□ -0.67
PTPRU-205ENST00000460170 BRI3O95415 125 aa10.83□□□□□ -0.68
PTPRU-205ENST00000460170 A0A1B0GX51 115 aa10.83□□□□□ -0.68
PTPRU-205ENST00000460170 LINC00643Q86TS7 51 aa10.83□□□□□ -0.68
PTPRU-205ENST00000460170 TIMM17BO60830 172 aa10.83□□□□□ -0.68
PTPRU-205ENST00000460170 C14orf132Q9NPU4 83 aa10.82□□□□□ -0.68
PTPRU-205ENST00000460170 UFSP1Q6NVU6 142 aa10.82□□□□□ -0.68
PTPRU-205ENST00000460170 TET2Q6N021 2002 aaPredicted RBP10.82□□□□□ -0.68
PTPRU-205ENST00000460170 MT-ATP8P03928 68 aa10.82□□□□□ -0.68
PTPRU-205ENST00000460170 MRPS36P82909 103 aaKnown RBP10.82□□□□□ -0.68
PTPRU-205ENST00000460170 JMJD1CQ15652 2540 aa10.82□□□□□ -0.68
PTPRU-205ENST00000460170 ADAMTS20P59510 1910 aa10.82□□□□□ -0.68
PTPRU-205ENST00000460170 LINC00482Q8N8I6 264 aa10.81□□□□□ -0.68
PTPRU-205ENST00000460170 J3KT08 172 aa10.81□□□□□ -0.68
PTPRU-205ENST00000460170 WFDC10AQ9H1F0 79 aa10.81□□□□□ -0.68
PTPRU-205ENST00000460170 INAFM1C9JVW0 142 aa10.79□□□□□ -0.68
PTPRU-205ENST00000460170 C5orf47Q569G3 176 aa10.79□□□□□ -0.68
PTPRU-205ENST00000460170 ZFYVE26Q68DK2 2539 aa10.79□□□□□ -0.68
PTPRU-205ENST00000460170 UBE2D1P51668 147 aa10.79□□□□□ -0.68
PTPRU-205ENST00000460170 NREPQ16612 68 aa10.79□□□□□ -0.68
PTPRU-205ENST00000460170 HIGD2BQ4VC39 106 aa10.78□□□□□ -0.68
PTPRU-205ENST00000460170 ZNF580Q9UK33 172 aa10.78□□□□□ -0.68
PTPRU-205ENST00000460170 PCNTO95613 3336 aa10.78□□□□□ -0.68
PTPRU-205ENST00000460170 MIFP14174 115 aa10.77□□□□□ -0.68
PTPRU-205ENST00000460170 COX7BP24311 80 aa10.77□□□□□ -0.68
PTPRU-205ENST00000460170 ODF3L2Q3SX64 289 aa10.77□□□□□ -0.68
PTPRU-205ENST00000460170 BBC3Q96PG8 261 aaPredicted RBP10.77□□□□□ -0.68
PTPRU-205ENST00000460170 PDE6GP18545 87 aa10.77□□□□□ -0.68
PTPRU-205ENST00000460170 FN1P02751 2386 aaKnown RBP10.77□□□□□ -0.69
PTPRU-205ENST00000460170 IGLV2-18A0A075B6J9 118 aa10.77□□□□□ -0.69
PTPRU-205ENST00000460170 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.69
PTPRU-205ENST00000460170 PKIGQ9Y2B9 76 aa10.77□□□□□ -0.69
PTPRU-205ENST00000460170 IGHV4-28A0A0C4DH34 117 aa10.76□□□□□ -0.69
PTPRU-205ENST00000460170 C11orf45Q8TAV5 145 aa10.76□□□□□ -0.69
PTPRU-205ENST00000460170 PRRC2CQ9Y520 2896 aaKnown RBP10.76□□□□□ -0.69
PTPRU-205ENST00000460170 NDUFC2O95298 119 aa10.76□□□□□ -0.69
PTPRU-205ENST00000460170 HILS1P60008 231 aa10.76□□□□□ -0.69
PTPRU-205ENST00000460170 KRTAP10-9P60411 292 aa10.76□□□□□ -0.69
PTPRU-205ENST00000460170 IGLV4-69A0A075B6H9 119 aa10.75□□□□□ -0.69
PTPRU-205ENST00000460170 UBE2D3P61077 147 aa10.75□□□□□ -0.69
PTPRU-205ENST00000460170 UBE2D2P62837 147 aa10.75□□□□□ -0.69
PTPRU-205ENST00000460170 POM121L12Q8N7R1 296 aa10.74□□□□□ -0.69
PTPRU-205ENST00000460170 PRB2P02812 416 aaPredicted RBP10.74□□□□□ -0.69
PTPRU-205ENST00000460170 LST1O00453 97 aa10.74□□□□□ -0.69
PTPRU-205ENST00000460170 CDC42SE2Q9NRR3 84 aa10.74□□□□□ -0.69
PTPRU-205ENST00000460170 NDUFV3P56181 108 aaKnown RBP10.73□□□□□ -0.69
PTPRU-205ENST00000460170 LRRK2Q5S007 2527 aa10.73□□□□□ -0.69
PTPRU-205ENST00000460170 RNF183Q96D59 192 aa10.73□□□□□ -0.69
PTPRU-205ENST00000460170 SLPIP03973 132 aa10.72□□□□□ -0.69
PTPRU-205ENST00000460170 LINC00959A0A1B0GUT2 108 aa10.72□□□□□ -0.69
PTPRU-205ENST00000460170 LY6G6DO95868 133 aa10.72□□□□□ -0.69
PTPRU-205ENST00000460170 LINC00242Q5T6M2 205 aa10.72□□□□□ -0.69
PTPRU-205ENST00000460170 CD164L2Q6UWJ8 174 aa10.72□□□□□ -0.69
PTPRU-205ENST00000460170 DEFB131BA0A096LNP1 70 aa10.7□□□□□ -0.7
PTPRU-205ENST00000460170 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms