RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 UBE2L6O14933 153 aa10.44□□□□□ -0.74
VCX3B-204ENST00000453306 ANGP03950 147 aaKnown RBP10.44□□□□□ -0.74
VCX3B-204ENST00000453306 RNASEKQ6P5S7 137 aaKnown RBP10.44□□□□□ -0.74
VCX3B-204ENST00000453306 CLPSL2Q6UWE3 100 aa10.44□□□□□ -0.74
VCX3B-204ENST00000453306 K7EP13 123 aa10.43□□□□□ -0.74
VCX3B-204ENST00000453306 NUPR1O60356 82 aa10.43□□□□□ -0.74
VCX3B-204ENST00000453306 LINC00614P0C842 121 aa10.43□□□□□ -0.74
VCX3B-204ENST00000453306 Q0VG73 95 aa10.43□□□□□ -0.74
VCX3B-204ENST00000453306 KRTAP26-1Q6PEX3 210 aa10.43□□□□□ -0.74
VCX3B-204ENST00000453306 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
VCX3B-204ENST00000453306 Q9HAA7 133 aa10.43□□□□□ -0.74
VCX3B-204ENST00000453306 CDC42SE2Q9NRR3 84 aa10.43□□□□□ -0.74
VCX3B-204ENST00000453306 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
VCX3B-204ENST00000453306 RNASE13Q5GAN3 156 aaKnown RBP10.42□□□□□ -0.74
VCX3B-204ENST00000453306 C2orf66Q6UXQ4 117 aa10.42□□□□□ -0.74
VCX3B-204ENST00000453306 Q6ZUT4 128 aa10.42□□□□□ -0.74
VCX3B-204ENST00000453306 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
VCX3B-204ENST00000453306 TIMM21Q9BVV7 248 aa10.42□□□□□ -0.74
VCX3B-204ENST00000453306 IGIPA6NJ69 53 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 K7EMI3 77 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BDP58876 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 PKIAP61925 76 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BCP62807 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST2H2BEQ16778 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 ORMDL2Q53FV1 153 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.41□□□□□ -0.74
VCX3B-204ENST00000453306 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 FA2HQ7L5A8 372 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BHQ93079 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BNQ99877 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
VCX3B-204ENST00000453306 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
VCX3B-204ENST00000453306 LRP1BQ9NZR2 4599 aa10.4□□□□□ -0.74
VCX3B-204ENST00000453306 ZNF25P17030 456 aaPredicted RBP10.4□□□□□ -0.74
VCX3B-204ENST00000453306 REG3AQ06141 175 aa10.4□□□□□ -0.74
VCX3B-204ENST00000453306 ZC2HC1BQ5TFG8 222 aa10.4□□□□□ -0.74
VCX3B-204ENST00000453306 ZNF664Q8N3J9 261 aa10.4□□□□□ -0.74
VCX3B-204ENST00000453306 OR5A1Q8NGJ0 315 aa10.4□□□□□ -0.74
VCX3B-204ENST00000453306 EREGO14944 169 aa10.39□□□□□ -0.75
VCX3B-204ENST00000453306 TOMM6Q96B49 74 aa10.39□□□□□ -0.75
VCX3B-204ENST00000453306 AP5S1Q9NUS5 200 aa10.39□□□□□ -0.75
VCX3B-204ENST00000453306 PYGO1Q9Y3Y4 419 aa10.39□□□□□ -0.75
VCX3B-204ENST00000453306 IGLV4-3A0A075B6K6 122 aa10.38□□□□□ -0.75
VCX3B-204ENST00000453306 SERF1AO75920 110 aa10.38□□□□□ -0.75
VCX3B-204ENST00000453306 KRTAP10-2P60368 255 aa10.38□□□□□ -0.75
VCX3B-204ENST00000453306 SPANXA1Q9NS26 97 aa10.38□□□□□ -0.75
VCX3B-204ENST00000453306 CYSLTR1Q9Y271 337 aa10.38□□□□□ -0.75
VCX3B-204ENST00000453306 IGLV10-54A0A075B6I4 117 aa10.37□□□□□ -0.75
VCX3B-204ENST00000453306 TRAV8-3A0A0A6YYJ7 113 aa10.37□□□□□ -0.75
VCX3B-204ENST00000453306 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
VCX3B-204ENST00000453306 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
VCX3B-204ENST00000453306 LINC00173Q6ZV60 143 aa10.37□□□□□ -0.75
VCX3B-204ENST00000453306 BAGE3Q86Y29 109 aa10.37□□□□□ -0.75
VCX3B-204ENST00000453306 TMEM18Q96B42 140 aa10.37□□□□□ -0.75
VCX3B-204ENST00000453306 TMEM101Q96IK0 257 aa10.37□□□□□ -0.75
VCX3B-204ENST00000453306 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
VCX3B-204ENST00000453306 WFDC2Q14508 124 aa10.36□□□□□ -0.75
VCX3B-204ENST00000453306 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
VCX3B-204ENST00000453306 DGAT2L7PQ6IED9 249 aa10.36□□□□□ -0.75
VCX3B-204ENST00000453306 LINC00959A0A1B0GUT2 108 aa10.35□□□□□ -0.75
VCX3B-204ENST00000453306 RAB5BP61020 215 aa10.35□□□□□ -0.75
VCX3B-204ENST00000453306 FAM19A2Q8N3H0 131 aa10.35□□□□□ -0.75
VCX3B-204ENST00000453306 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
VCX3B-204ENST00000453306 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
VCX3B-204ENST00000453306 LRCOL1A6NCL2 159 aa10.34□□□□□ -0.75
VCX3B-204ENST00000453306 MIAQ16674 131 aa10.34□□□□□ -0.75
VCX3B-204ENST00000453306 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
VCX3B-204ENST00000453306 NFE4Q86UQ8 179 aa10.34□□□□□ -0.75
VCX3B-204ENST00000453306 SCGB3A1Q96QR1 104 aa10.34□□□□□ -0.75
VCX3B-204ENST00000453306 AMELXQ99217 191 aa10.34□□□□□ -0.75
VCX3B-204ENST00000453306 DNAH5Q8TE73 4624 aa10.34□□□□□ -0.75
VCX3B-204ENST00000453306 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
VCX3B-204ENST00000453306 CRPP02741 224 aa10.33□□□□□ -0.76
VCX3B-204ENST00000453306 ERASQ7Z444 233 aa10.33□□□□□ -0.76
VCX3B-204ENST00000453306 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
VCX3B-204ENST00000453306 HBDP02042 147 aa10.32□□□□□ -0.76
VCX3B-204ENST00000453306 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
VCX3B-204ENST00000453306 CHCHD10Q8WYQ3 142 aaPredicted RBP10.32□□□□□ -0.76
VCX3B-204ENST00000453306 TMEM141Q96I45 108 aa10.32□□□□□ -0.76
VCX3B-204ENST00000453306 TIMM17AQ99595 171 aa10.32□□□□□ -0.76
VCX3B-204ENST00000453306 APOBP04114 4563 aaKnown RBP10.31□□□□□ -0.76
VCX3B-204ENST00000453306 TRAV8-4A0A0B4J246 113 aa10.31□□□□□ -0.76
VCX3B-204ENST00000453306 GAGE12HA6NDE8 117 aa10.31□□□□□ -0.76
VCX3B-204ENST00000453306 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
VCX3B-204ENST00000453306 FOXI1Q12951 378 aa10.31□□□□□ -0.76
VCX3B-204ENST00000453306 COA6Q5JTJ3 125 aaKnown RBP10.31□□□□□ -0.76
VCX3B-204ENST00000453306 C1orf43Q9BWL3 253 aa10.31□□□□□ -0.76
VCX3B-204ENST00000453306 A0A087WTM6 91 aa10.3□□□□□ -0.76
VCX3B-204ENST00000453306 LECT2O14960 151 aa10.3□□□□□ -0.76
VCX3B-204ENST00000453306 CCL25O15444 150 aa10.3□□□□□ -0.76
VCX3B-204ENST00000453306 G0S2P27469 103 aa10.3□□□□□ -0.76
VCX3B-204ENST00000453306 COX6A2Q02221 97 aa10.3□□□□□ -0.76
VCX3B-204ENST00000453306 SMAGPQ0VAQ4 97 aa10.3□□□□□ -0.76
VCX3B-204ENST00000453306 TM2D2Q9BX73 214 aa10.3□□□□□ -0.76
VCX3B-204ENST00000453306 HSBP1O75506 76 aa10.29□□□□□ -0.76
VCX3B-204ENST00000453306 NPSP0C0P6 89 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms