RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
SMC6-206ENST00000446852 TIMM21Q9BVV7 248 aa12.34□□□□□ -0.43
SMC6-206ENST00000446852 PKD1L1Q8TDX9 2849 aa12.33□□□□□ -0.43
SMC6-206ENST00000446852 IGHV3-64A0A075B6Q5 118 aa12.33□□□□□ -0.44
SMC6-206ENST00000446852 H3BRM9 83 aa12.33□□□□□ -0.44
SMC6-206ENST00000446852 J3QQQ9 107 aa12.33□□□□□ -0.44
SMC6-206ENST00000446852 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
SMC6-206ENST00000446852 SMIM9A6NGZ8 99 aa12.33□□□□□ -0.44
SMC6-206ENST00000446852 SCGB1D4Q6XE38 83 aa12.33□□□□□ -0.44
SMC6-206ENST00000446852 RAB37Q96AX2 223 aa12.32□□□□□ -0.44
SMC6-206ENST00000446852 CMYA5Q8N3K9 4069 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 K7ERJ3 54 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 LEPROTO15243 131 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 PTTG1IPP53801 180 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 VAMP3Q15836 100 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 DGAT2L7PQ6IED9 249 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 CCL25O15444 150 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 UBE2D1P51668 147 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 APOC4P55056 127 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 GTSF1LQ9H1H1 148 aa12.31□□□□□ -0.44
SMC6-206ENST00000446852 UBE2V1Q13404 147 aa12.3□□□□□ -0.44
SMC6-206ENST00000446852 A0A0J9YY99 117 aa12.3□□□□□ -0.44
SMC6-206ENST00000446852 LGALS3P17931 250 aaKnown RBP12.3□□□□□ -0.44
SMC6-206ENST00000446852 NAA38Q9BRA0 125 aaKnown RBP12.3□□□□□ -0.44
SMC6-206ENST00000446852 NHP2Q9NX24 153 aaKnown RBP12.3□□□□□ -0.44
SMC6-206ENST00000446852 C9orf118A6NHY6 69 aa12.29□□□□□ -0.44
SMC6-206ENST00000446852 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
SMC6-206ENST00000446852 MAST4O15021 2626 aa12.29□□□□□ -0.44
SMC6-206ENST00000446852 SMIM13P0DJ93 91 aa12.29□□□□□ -0.44
SMC6-206ENST00000446852 FAM222AQ5U5X8 452 aa12.29□□□□□ -0.44
SMC6-206ENST00000446852 TRAV8-3A0A0A6YYJ7 113 aa12.28□□□□□ -0.44
SMC6-206ENST00000446852 DEFB4AO15263 64 aa12.28□□□□□ -0.44
SMC6-206ENST00000446852 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
SMC6-206ENST00000446852 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
SMC6-206ENST00000446852 H3BUT2 72 aa12.28□□□□□ -0.44
SMC6-206ENST00000446852 IGHV3-30-3P0DP02 117 aa12.28□□□□□ -0.44
SMC6-206ENST00000446852 TMEM243Q9BU79 118 aa12.28□□□□□ -0.44
SMC6-206ENST00000446852 IGHV4-30-4P0DP06 118 aa12.27□□□□□ -0.45
SMC6-206ENST00000446852 IGHV4-28A0A0C4DH34 117 aa12.26□□□□□ -0.45
SMC6-206ENST00000446852 OR5A1Q8NGJ0 315 aa12.26□□□□□ -0.45
SMC6-206ENST00000446852 OXLD1Q5BKU9 147 aa12.26□□□□□ -0.45
SMC6-206ENST00000446852 GEMIN7Q9H840 131 aaKnown RBP12.26□□□□□ -0.45
SMC6-206ENST00000446852 CDC42SE2Q9NRR3 84 aa12.26□□□□□ -0.45
SMC6-206ENST00000446852 LYRM9A8MSI8 78 aa12.25□□□□□ -0.45
SMC6-206ENST00000446852 SPINK8P0C7L1 97 aa12.25□□□□□ -0.45
SMC6-206ENST00000446852 CDKN2A-AS1Q9UH64 79 aa12.25□□□□□ -0.45
SMC6-206ENST00000446852 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
SMC6-206ENST00000446852 COX6A2Q02221 97 aa12.25□□□□□ -0.45
SMC6-206ENST00000446852 SRSF9Q13242 221 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMC6-206ENST00000446852 ANK2Q01484 3957 aa12.24□□□□□ -0.45
SMC6-206ENST00000446852 IGLV5-45A0A087WSX0 123 aa12.24□□□□□ -0.45
SMC6-206ENST00000446852 UBE2L6O14933 153 aa12.24□□□□□ -0.45
SMC6-206ENST00000446852 C12orf74Q32Q52 190 aa12.24□□□□□ -0.45
SMC6-206ENST00000446852 LINC00242Q5T6M2 205 aa12.24□□□□□ -0.45
SMC6-206ENST00000446852 VSIG2Q96IQ7 327 aa12.24□□□□□ -0.45
SMC6-206ENST00000446852 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
SMC6-206ENST00000446852 TIRAPP58753 221 aa12.23□□□□□ -0.45
SMC6-206ENST00000446852 C10orf126Q8N4M7 172 aa12.23□□□□□ -0.45
SMC6-206ENST00000446852 Q8NAQ8 132 aa12.23□□□□□ -0.45
SMC6-206ENST00000446852 SPANXB1Q9NS25 103 aaPredicted RBP12.23□□□□□ -0.45
SMC6-206ENST00000446852 A8MZ25 164 aa12.23□□□□□ -0.45
SMC6-206ENST00000446852 GYPEP15421 78 aa12.22□□□□□ -0.45
SMC6-206ENST00000446852 A0A1B0GWB2 263 aa12.22□□□□□ -0.45
SMC6-206ENST00000446852 KRTAP10-11P60412 298 aa12.22□□□□□ -0.45
SMC6-206ENST00000446852 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
SMC6-206ENST00000446852 TRAV13-1A0A0B4J241 112 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 A0A1W2PPM0 123 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 H7C423 109 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 SMAGPQ0VAQ4 97 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 C3orf56Q8N813 242 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 CELA1Q9UNI1 258 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 GAGE6Q13070 117 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 RNF183Q96D59 192 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 PRO0255Q9UI72 69 aa12.21□□□□□ -0.45
SMC6-206ENST00000446852 MIFP14174 115 aa12.2□□□□□ -0.46
SMC6-206ENST00000446852 PRIMA1Q86XR5 153 aa12.2□□□□□ -0.46
SMC6-206ENST00000446852 TMEM101Q96IK0 257 aa12.2□□□□□ -0.46
SMC6-206ENST00000446852 HERVK_113P63121 156 aa12.2□□□□□ -0.46
SMC6-206ENST00000446852 SAMD5Q5TGI4 173 aa12.2□□□□□ -0.46
SMC6-206ENST00000446852 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
SMC6-206ENST00000446852 ATP6V0E2Q8NHE4 81 aa12.19□□□□□ -0.46
SMC6-206ENST00000446852 CHCHD5Q9BSY4 110 aa12.18□□□□□ -0.46
SMC6-206ENST00000446852 COL6A5A8TX70 2615 aa12.18□□□□□ -0.46
SMC6-206ENST00000446852 IGLV4-60A0A075B6I1 120 aa12.18□□□□□ -0.46
SMC6-206ENST00000446852 NDUFA12Q9UI09 145 aa12.18□□□□□ -0.46
SMC6-206ENST00000446852 IGLL5B9A064 214 aa12.17□□□□□ -0.46
SMC6-206ENST00000446852 DAD1P61803 113 aa12.17□□□□□ -0.46
SMC6-206ENST00000446852 DNAH3Q8TD57 4116 aa12.17□□□□□ -0.46
SMC6-206ENST00000446852 TMEM238LA0A1B0GVL6 79 aa12.17□□□□□ -0.46
SMC6-206ENST00000446852 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
SMC6-206ENST00000446852 A6NJY4 79 aa12.17□□□□□ -0.46
SMC6-206ENST00000446852 ZFAND6Q6FIF0 208 aa12.17□□□□□ -0.46
SMC6-206ENST00000446852 SHISA2Q6UWI4 295 aa12.17□□□□□ -0.46
SMC6-206ENST00000446852 K7EP34 96 aa12.16□□□□□ -0.46
SMC6-206ENST00000446852 PAX4O43316 350 aa12.16□□□□□ -0.46
SMC6-206ENST00000446852 LITAFQ99732 161 aa12.16□□□□□ -0.46
SMC6-206ENST00000446852 A0A096LPF7 62 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms