RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 U3KQK5 164 aa9.08□□□□□ -0.96
TCOF1-205ENST00000439160 IGHV1-58A0A0C4DH39 117 aa9.08□□□□□ -0.96
TCOF1-205ENST00000439160 FAM110AQ9BQ89 295 aa9.08□□□□□ -0.96
TCOF1-205ENST00000439160 IFITM1P13164 125 aa9.08□□□□□ -0.96
TCOF1-205ENST00000439160 RBX1P62877 108 aa9.07□□□□□ -0.96
TCOF1-205ENST00000439160 NRACQ8N912 160 aa9.07□□□□□ -0.96
TCOF1-205ENST00000439160 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.07□□□□□ -0.96
TCOF1-205ENST00000439160 Q8N976 141 aa9.07□□□□□ -0.96
TCOF1-205ENST00000439160 MUC3AQ02505 3323 aa9.06□□□□□ -0.96
TCOF1-205ENST00000439160 IGKV2D-26A0A0A0MRZ7 120 aa9.06□□□□□ -0.96
TCOF1-205ENST00000439160 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
TCOF1-205ENST00000439160 CDKN2A-AS1Q9UH64 79 aa9.06□□□□□ -0.96
TCOF1-205ENST00000439160 PTH2Q96A98 100 aa9.06□□□□□ -0.96
TCOF1-205ENST00000439160 F8WEM9 126 aa9.06□□□□□ -0.96
TCOF1-205ENST00000439160 IGLV4-3A0A075B6K6 122 aa9.05□□□□□ -0.96
TCOF1-205ENST00000439160 CRYGDP07320 174 aa9.05□□□□□ -0.96
TCOF1-205ENST00000439160 TRBV27A0A0K0K1C4 114 aa9.05□□□□□ -0.96
TCOF1-205ENST00000439160 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
TCOF1-205ENST00000439160 G3V4G9 280 aa9.05□□□□□ -0.96
TCOF1-205ENST00000439160 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 AGRNO00468 2067 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 USP24Q9UPU5 2620 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 SOCS3O14543 225 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 C11orf45Q8TAV5 145 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 SPAG11BQ08648 103 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 LINC00269Q8N2A0 174 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 CNFNQ9BYD5 112 aa9.04□□□□□ -0.96
TCOF1-205ENST00000439160 URB1-AS1Q96HZ7 61 aa9.03□□□□□ -0.96
TCOF1-205ENST00000439160 C9orf85Q96MD7 179 aa9.03□□□□□ -0.96
TCOF1-205ENST00000439160 IGHV4-4A0A075B6R2 117 aa9.03□□□□□ -0.96
TCOF1-205ENST00000439160 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
TCOF1-205ENST00000439160 SHISA2Q6UWI4 295 aa9.03□□□□□ -0.96
TCOF1-205ENST00000439160 USP34Q70CQ2 3546 aa9.03□□□□□ -0.96
TCOF1-205ENST00000439160 RPL18AQ02543 176 aaKnown RBP9.03□□□□□ -0.96
TCOF1-205ENST00000439160 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.97
TCOF1-205ENST00000439160 RS1O15537 224 aa9.02□□□□□ -0.97
TCOF1-205ENST00000439160 ZNF22P17026 224 aaPredicted RBP9.02□□□□□ -0.97
TCOF1-205ENST00000439160 TRBV6-5A0A0K0K1A5 114 aa9.02□□□□□ -0.97
TCOF1-205ENST00000439160 OXLD1Q5BKU9 147 aa9.02□□□□□ -0.97
TCOF1-205ENST00000439160 POLR2KP53803 58 aaKnown RBP9.01□□□□□ -0.97
TCOF1-205ENST00000439160 C2orf91Q6ZV80 131 aa9.01□□□□□ -0.97
TCOF1-205ENST00000439160 MAPKAPK5-AS1Q8N8E1 139 aa9.01□□□□□ -0.97
TCOF1-205ENST00000439160 REV3LO60673 3130 aa9.01□□□□□ -0.97
TCOF1-205ENST00000439160 LOC100131303A0A0U1RQF7 123 aa9.01□□□□□ -0.97
TCOF1-205ENST00000439160 TRBV6-4A0A1B0GX49 114 aa9.01□□□□□ -0.97
TCOF1-205ENST00000439160 NFE4Q86UQ8 179 aa9.01□□□□□ -0.97
TCOF1-205ENST00000439160 TSHBP01222 138 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 BAALC-AS2P0C853 105 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 A0A0J9YXY3 114 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 NDUFA1O15239 70 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 TMEM126AQ9H061 195 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 TRBV6-8A0A0A6YYG3 113 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 SPTBN5Q9NRC6 3674 aaKnown RBP9□□□□□ -0.97
TCOF1-205ENST00000439160 CFAP46Q8IYW2 2715 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 IGHV4-28A0A0C4DH34 117 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 BRI3O95415 125 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 REG3AQ06141 175 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 C15orf53Q8NAA6 179 aa9□□□□□ -0.97
TCOF1-205ENST00000439160 B5MCH6 92 aa8.99□□□□□ -0.97
TCOF1-205ENST00000439160 MIFP14174 115 aa8.99□□□□□ -0.97
TCOF1-205ENST00000439160 UBE2BP63146 152 aa8.99□□□□□ -0.97
TCOF1-205ENST00000439160 DEFB131BA0A096LNP1 70 aa8.99□□□□□ -0.97
TCOF1-205ENST00000439160 FOXI1Q12951 378 aa8.99□□□□□ -0.97
TCOF1-205ENST00000439160 A8MZ25 164 aa8.98□□□□□ -0.97
TCOF1-205ENST00000439160 PRB2P02812 416 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-205ENST00000439160 TEN1Q86WV5 123 aa8.98□□□□□ -0.97
TCOF1-205ENST00000439160 NDUFA7O95182 113 aa8.98□□□□□ -0.97
TCOF1-205ENST00000439160 HIGD2BQ4VC39 106 aa8.98□□□□□ -0.97
TCOF1-205ENST00000439160 DSPP15924 2871 aaKnown RBP8.98□□□□□ -0.97
TCOF1-205ENST00000439160 MAP1AP78559 2803 aaPredicted RBP8.97□□□□□ -0.97
TCOF1-205ENST00000439160 CELSR3Q9NYQ7 3312 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 ANKRD29Q8N6D5 301 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 IGLV1-51P01701 117 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 HAMPP81172 84 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 ZNF580Q9UK33 172 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 MGAM2Q2M2H8 2515 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 NCR3O14931 201 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 LINC01620Q4KN68 170 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 CLEC2BQ92478 149 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 FRYLO94915 3013 aa8.97□□□□□ -0.97
TCOF1-205ENST00000439160 HELZ2Q9BYK8 2649 aaKnown RBP8.97□□□□□ -0.97
TCOF1-205ENST00000439160 TMEM223A0PJW6 202 aa8.96□□□□□ -0.97
TCOF1-205ENST00000439160 CHCHD10Q8WYQ3 142 aaPredicted RBP8.96□□□□□ -0.97
TCOF1-205ENST00000439160 FLNAP21333 2647 aaKnown RBP8.96□□□□□ -0.98
TCOF1-205ENST00000439160 CXCL5P42830 114 aa8.96□□□□□ -0.98
TCOF1-205ENST00000439160 MIAQ16674 131 aa8.96□□□□□ -0.98
TCOF1-205ENST00000439160 ORMDL1Q9P0S3 153 aa8.95□□□□□ -0.98
TCOF1-205ENST00000439160 RPL32P62910 135 aaKnown RBP8.95□□□□□ -0.98
TCOF1-205ENST00000439160 COX8CQ7Z4L0 72 aa8.95□□□□□ -0.98
TCOF1-205ENST00000439160 DSCR8Q96T75 97 aa8.95□□□□□ -0.98
TCOF1-205ENST00000439160 H0YGX0 51 aa8.95□□□□□ -0.98
TCOF1-205ENST00000439160 CRYBA4P53673 196 aa8.95□□□□□ -0.98
TCOF1-205ENST00000439160 UBL5Q9BZL1 73 aa8.95□□□□□ -0.98
TCOF1-205ENST00000439160 SS18L2Q9UHA2 77 aa8.95□□□□□ -0.98
TCOF1-205ENST00000439160 PYGO1Q9Y3Y4 419 aa8.95□□□□□ -0.98
TCOF1-205ENST00000439160 TM2D2Q9BX73 214 aa8.94□□□□□ -0.98
TCOF1-205ENST00000439160 LECT2O14960 151 aa8.94□□□□□ -0.98
TCOF1-205ENST00000439160 IGHV4-30-4P0DP06 118 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms