RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 Q6ZTI0 123 aa9.83□□□□□ -0.84
THBS3-202ENST00000428962 HIVEP2P31629 2446 aa9.83□□□□□ -0.84
THBS3-202ENST00000428962 IGHV1-58A0A0C4DH39 117 aa9.82□□□□□ -0.84
THBS3-202ENST00000428962 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
THBS3-202ENST00000428962 C19orf73Q9NVV2 129 aa9.82□□□□□ -0.84
THBS3-202ENST00000428962 APOMO95445 188 aa9.82□□□□□ -0.84
THBS3-202ENST00000428962 GIG44P09565 113 aaPredicted RBP9.82□□□□□ -0.84
THBS3-202ENST00000428962 RPL35AP18077 110 aaKnown RBP9.82□□□□□ -0.84
THBS3-202ENST00000428962 RPL24P83731 157 aaKnown RBP9.82□□□□□ -0.84
THBS3-202ENST00000428962 RNASE13Q5GAN3 156 aaKnown RBP9.82□□□□□ -0.84
THBS3-202ENST00000428962 NOP10Q9NPE3 64 aaKnown RBP9.82□□□□□ -0.84
THBS3-202ENST00000428962 WFDC10AQ9H1F0 79 aa9.81□□□□□ -0.84
THBS3-202ENST00000428962 FN1P02751 2386 aaKnown RBP9.8□□□□□ -0.84
THBS3-202ENST00000428962 NIPBLQ6KC79 2804 aaeCLIP9.8□□□□□ -0.84
THBS3-202ENST00000428962 TSPAN13O95857 204 aa9.8□□□□□ -0.84
THBS3-202ENST00000428962 PF4P02776 101 aa9.8□□□□□ -0.84
THBS3-202ENST00000428962 TIRAPP58753 221 aa9.8□□□□□ -0.84
THBS3-202ENST00000428962 VSIG2Q96IQ7 327 aa9.8□□□□□ -0.84
THBS3-202ENST00000428962 A0A0J9YXY3 114 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 CRLF1O75462 422 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 UBE2D3P61077 147 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 UBE2D2P62837 147 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 CSDC2Q9Y534 153 aaKnown RBP9.79□□□□□ -0.84
THBS3-202ENST00000428962 TRGV2A0A075B6R0 118 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 H3BMG7 143 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 CFC1BP0CG36 223 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 CFC1P0CG37 223 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 OVOL2Q9BRP0 275 aa9.79□□□□□ -0.84
THBS3-202ENST00000428962 NSD1Q96L73 2696 aaPredicted RBP9.79□□□□□ -0.84
THBS3-202ENST00000428962 IGLV5-45A0A087WSX0 123 aa9.78□□□□□ -0.84
THBS3-202ENST00000428962 TRAV8-3A0A0A6YYJ7 113 aa9.78□□□□□ -0.84
THBS3-202ENST00000428962 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
THBS3-202ENST00000428962 HERVK_113P63121 156 aa9.78□□□□□ -0.84
THBS3-202ENST00000428962 GAGE13Q4V321 117 aa9.78□□□□□ -0.84
THBS3-202ENST00000428962 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
THBS3-202ENST00000428962 PRO1854Q9UHT4 67 aa9.78□□□□□ -0.84
THBS3-202ENST00000428962 NDUFA12Q9UI09 145 aa9.78□□□□□ -0.84
THBS3-202ENST00000428962 WNK1Q9H4A3 2382 aa9.78□□□□□ -0.84
THBS3-202ENST00000428962 A0A0B4J2C4 111 aa9.77□□□□□ -0.84
THBS3-202ENST00000428962 GAGE12JA6NER3 117 aa9.77□□□□□ -0.84
THBS3-202ENST00000428962 GAGE4Q13068 117 aa9.77□□□□□ -0.84
THBS3-202ENST00000428962 GAGE5Q13069 117 aa9.77□□□□□ -0.84
THBS3-202ENST00000428962 GTSF1LQ9H1H1 148 aa9.77□□□□□ -0.84
THBS3-202ENST00000428962 LOC107984156A0A0G2JMH3 177 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 GAGE7O76087 117 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 SPINK8P0C7L1 97 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 GAGE12FP0CL80 117 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 GAGE12GP0CL81 117 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 GAGE12IP0CL82 117 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 ZFAND6Q6FIF0 208 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 ARL17AQ8IVW1 177 aa9.77□□□□□ -0.85
THBS3-202ENST00000428962 A4D1N5 150 aa9.76□□□□□ -0.85
THBS3-202ENST00000428962 FAM19A3Q7Z5A8 133 aa9.76□□□□□ -0.85
THBS3-202ENST00000428962 LINC00482Q8N8I6 264 aa9.76□□□□□ -0.85
THBS3-202ENST00000428962 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
THBS3-202ENST00000428962 SPANXCQ9NY87 97 aa9.76□□□□□ -0.85
THBS3-202ENST00000428962 TRBV20-1A0A075B6N2 111 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 UBE2L6O14933 153 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 MUSTN1Q8IVN3 82 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 SBSPONQ8IVN8 264 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 TMEM243Q9BU79 118 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 TRGV4A0A0C4DH28 118 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 H7C423 109 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 TIMM17BO60830 172 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 NTM-AS1Q6ZSK4 140 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
THBS3-202ENST00000428962 J3QR89 54 aa9.74□□□□□ -0.85
THBS3-202ENST00000428962 LINC00694P0DN24 101 aa9.74□□□□□ -0.85
THBS3-202ENST00000428962 INSL3P51460 131 aa9.74□□□□□ -0.85
THBS3-202ENST00000428962 KRTAP10-3P60369 221 aa9.74□□□□□ -0.85
THBS3-202ENST00000428962 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
THBS3-202ENST00000428962 LITAFQ99732 161 aa9.74□□□□□ -0.85
THBS3-202ENST00000428962 CDKN2A-AS1Q9UH64 79 aa9.74□□□□□ -0.85
THBS3-202ENST00000428962 PRO0461Q9UI25 63 aa9.74□□□□□ -0.85
THBS3-202ENST00000428962 NDUFA1O15239 70 aa9.73□□□□□ -0.85
THBS3-202ENST00000428962 PSMB2P49721 201 aa9.73□□□□□ -0.85
THBS3-202ENST00000428962 WFDC2Q14508 124 aa9.73□□□□□ -0.85
THBS3-202ENST00000428962 MIAQ16674 131 aa9.73□□□□□ -0.85
THBS3-202ENST00000428962 TEX48A0A1B0GUV7 120 aa9.72□□□□□ -0.85
THBS3-202ENST00000428962 A0A1B0GV72 72 aa9.72□□□□□ -0.85
THBS3-202ENST00000428962 LINC00242Q5T6M2 205 aa9.72□□□□□ -0.85
THBS3-202ENST00000428962 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
THBS3-202ENST00000428962 JMJD1CQ15652 2540 aa9.72□□□□□ -0.85
THBS3-202ENST00000428962 CDC42SE2Q9NRR3 84 aa9.72□□□□□ -0.85
THBS3-202ENST00000428962 IGLV5-39A0A0G2JS06 123 aa9.71□□□□□ -0.85
THBS3-202ENST00000428962 IGHV3-33P01772 117 aa9.71□□□□□ -0.85
THBS3-202ENST00000428962 C9orf66Q5T8R8 295 aa9.71□□□□□ -0.85
THBS3-202ENST00000428962 PRSS2P07478 247 aa9.7□□□□□ -0.86
THBS3-202ENST00000428962 SCGB1C2P0DMR2 95 aa9.7□□□□□ -0.86
THBS3-202ENST00000428962 IFITM1P13164 125 aa9.7□□□□□ -0.86
THBS3-202ENST00000428962 CIRBPQ14011 172 aaKnown RBP9.7□□□□□ -0.86
THBS3-202ENST00000428962 SFTA2Q6UW10 78 aa9.7□□□□□ -0.86
THBS3-202ENST00000428962 RNF183Q96D59 192 aa9.7□□□□□ -0.86
THBS3-202ENST00000428962 TRAV13-1A0A0B4J241 112 aa9.7□□□□□ -0.86
THBS3-202ENST00000428962 COX6A2Q02221 97 aa9.7□□□□□ -0.86
THBS3-202ENST00000428962 KIR2DL5BQ8NHK3 375 aa9.7□□□□□ -0.86
THBS3-202ENST00000428962 ANK3Q12955 4377 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms