RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MAST4O15021 2626 aa7.37□□□□□ -1.23
HDAC9-210ENST00000428307 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
HDAC9-210ENST00000428307 CYSRT1A8MQ03 144 aa7.37□□□□□ -1.23
HDAC9-210ENST00000428307 J3QQQ9 107 aa7.37□□□□□ -1.23
HDAC9-210ENST00000428307 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
HDAC9-210ENST00000428307 CEND1Q8N111 149 aa7.37□□□□□ -1.23
HDAC9-210ENST00000428307 K7ERJ3 54 aa7.36□□□□□ -1.23
HDAC9-210ENST00000428307 MRPS36P82909 103 aaKnown RBP7.36□□□□□ -1.23
HDAC9-210ENST00000428307 CRYBA4P53673 196 aa7.35□□□□□ -1.23
HDAC9-210ENST00000428307 TM2D2Q9BX73 214 aa7.35□□□□□ -1.23
HDAC9-210ENST00000428307 NHP2Q9NX24 153 aaKnown RBP7.35□□□□□ -1.23
HDAC9-210ENST00000428307 PKD1L1Q8TDX9 2849 aa7.35□□□□□ -1.23
HDAC9-210ENST00000428307 LGALS3P17931 250 aaKnown RBP7.35□□□□□ -1.23
HDAC9-210ENST00000428307 APOC4P55056 127 aa7.35□□□□□ -1.23
HDAC9-210ENST00000428307 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
HDAC9-210ENST00000428307 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
HDAC9-210ENST00000428307 TRAV8-3A0A0A6YYJ7 113 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 SMIM9A6NGZ8 99 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 CCL25O15444 150 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 CIDEAO60543 219 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 IGHV4-30-4P0DP06 118 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 SRSF9Q13242 221 aaKnown RBP eCLIP7.34□□□□□ -1.23
HDAC9-210ENST00000428307 KIR2DL5BQ8NHK3 375 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 H3BRM9 83 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 H3BUT2 72 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 SMIM13P0DJ93 91 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 C3orf56Q8N813 242 aa7.34□□□□□ -1.23
HDAC9-210ENST00000428307 GEMIN7Q9H840 131 aaKnown RBP7.34□□□□□ -1.23
HDAC9-210ENST00000428307 LEPROTO15243 131 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 UBE2V1Q13404 147 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 COL6A5A8TX70 2615 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 TRAV13-1A0A0B4J241 112 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 A0A0J9YY99 117 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 TINCRA0A1B0GVN0 87 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 A8MZ25 164 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 UBE2L6O14933 153 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 SPINK8P0C7L1 97 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 UBE2D1P51668 147 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 TAL2Q16559 108 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 TMEM243Q9BU79 118 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 TIMM21Q9BVV7 248 aa7.33□□□□□ -1.24
HDAC9-210ENST00000428307 IGHV4-28A0A0C4DH34 117 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 IGHV3-30-3P0DP02 117 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 SBSPONQ8IVN8 264 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 LINC00612Q8N6U2 182 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 GTSF1LQ9H1H1 148 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 CDKN2A-AS1Q9UH64 79 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 C9orf118A6NHY6 69 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 WIPF1O43516 503 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 COX6A2Q02221 97 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 GAGE6Q13070 117 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 OR5A1Q8NGJ0 315 aa7.32□□□□□ -1.24
HDAC9-210ENST00000428307 A0A096LPF7 62 aa7.31□□□□□ -1.24
HDAC9-210ENST00000428307 GYPEP15421 78 aa7.31□□□□□ -1.24
HDAC9-210ENST00000428307 CDC42SE2Q9NRR3 84 aa7.31□□□□□ -1.24
HDAC9-210ENST00000428307 TRBV6-8A0A0A6YYG3 113 aa7.31□□□□□ -1.24
HDAC9-210ENST00000428307 CSDC2Q9Y534 153 aaKnown RBP7.31□□□□□ -1.24
HDAC9-210ENST00000428307 IGHV1-58A0A0C4DH39 117 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 KRTAP10-11P60412 298 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 LINC00242Q5T6M2 205 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 PRIMA1Q86XR5 153 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 TMEM101Q96IK0 257 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 CHCHD5Q9BSY4 110 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 LYRM9A8MSI8 78 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 C10orf126Q8N4M7 172 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 VSIG2Q96IQ7 327 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 PRO0255Q9UI72 69 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 CELA1Q9UNI1 258 aa7.3□□□□□ -1.24
HDAC9-210ENST00000428307 Q8NAQ8 132 aa7.29□□□□□ -1.24
HDAC9-210ENST00000428307 ATP6V0E2Q8NHE4 81 aa7.29□□□□□ -1.24
HDAC9-210ENST00000428307 GAGE10A6NGK3 116 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 TIRAPP58753 221 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 DAD1P61803 113 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 SAMD5Q5TGI4 173 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 IGLV4-60A0A075B6I1 120 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 PAX4O43316 350 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 RNF183Q96D59 192 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 NOTCH1P46531 2555 aa7.28□□□□□ -1.24
HDAC9-210ENST00000428307 A0A1W2PPM0 123 aa7.27□□□□□ -1.24
HDAC9-210ENST00000428307 MIFP14174 115 aa7.27□□□□□ -1.24
HDAC9-210ENST00000428307 HTN3P15516 51 aa7.27□□□□□ -1.24
HDAC9-210ENST00000428307 HERVK_113P63121 156 aa7.27□□□□□ -1.24
HDAC9-210ENST00000428307 SHISA2Q6UWI4 295 aa7.27□□□□□ -1.24
HDAC9-210ENST00000428307 IGLV5-45A0A087WSX0 123 aa7.27□□□□□ -1.25
HDAC9-210ENST00000428307 A0A0J9YXY3 114 aa7.27□□□□□ -1.25
HDAC9-210ENST00000428307 APOMO95445 188 aa7.27□□□□□ -1.25
HDAC9-210ENST00000428307 IGHV3-30P01768 117 aa7.27□□□□□ -1.25
HDAC9-210ENST00000428307 IGHV3-30-5P0DP03 117 aa7.27□□□□□ -1.25
HDAC9-210ENST00000428307 SMAGPQ0VAQ4 97 aa7.27□□□□□ -1.25
HDAC9-210ENST00000428307 TMEM262E9PQX1 116 aa7.26□□□□□ -1.25
HDAC9-210ENST00000428307 TRAV26-1A0A087WT03 109 aa7.26□□□□□ -1.25
HDAC9-210ENST00000428307 A6NJY4 79 aa7.26□□□□□ -1.25
HDAC9-210ENST00000428307 IGLL5B9A064 214 aa7.26□□□□□ -1.25
HDAC9-210ENST00000428307 F5H768 121 aa7.26□□□□□ -1.25
HDAC9-210ENST00000428307 H7C423 109 aa7.26□□□□□ -1.25
HDAC9-210ENST00000428307 SPART-AS1P0CW21 52 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms