RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 FAM222AQ5U5X8 452 aa15.36■□□□□ 0.05
CNEP1R1-202ENST00000427478 PLEKHB2Q96CS7 222 aa15.36■□□□□ 0.05
CNEP1R1-202ENST00000427478 SCGB1D4Q6XE38 83 aa15.35■□□□□ 0.05
CNEP1R1-202ENST00000427478 SBSPONQ8IVN8 264 aa15.35■□□□□ 0.05
CNEP1R1-202ENST00000427478 CEND1Q8N111 149 aa15.35■□□□□ 0.05
CNEP1R1-202ENST00000427478 LINC00469Q8N7U9 141 aa15.35■□□□□ 0.05
CNEP1R1-202ENST00000427478 HIST1H4GQ99525 98 aa15.35■□□□□ 0.05
CNEP1R1-202ENST00000427478 GTSF1LQ9H1H1 148 aa15.35■□□□□ 0.05
CNEP1R1-202ENST00000427478 J3QQQ9 107 aa15.34■□□□□ 0.05
CNEP1R1-202ENST00000427478 IGHV4-28A0A0C4DH34 117 aa15.33■□□□□ 0.04
CNEP1R1-202ENST00000427478 LEPROTO15243 131 aa15.33■□□□□ 0.04
CNEP1R1-202ENST00000427478 LGALS3P17931 250 aaKnown RBP15.33■□□□□ 0.04
CNEP1R1-202ENST00000427478 TAL2Q16559 108 aa15.33■□□□□ 0.04
CNEP1R1-202ENST00000427478 TINCRA0A1B0GVN0 87 aa15.32■□□□□ 0.04
CNEP1R1-202ENST00000427478 PTTG1IPP53801 180 aa15.32■□□□□ 0.04
CNEP1R1-202ENST00000427478 TMEM243Q9BU79 118 aa15.32■□□□□ 0.04
CNEP1R1-202ENST00000427478 TM2D2Q9BX73 214 aa15.32■□□□□ 0.04
CNEP1R1-202ENST00000427478 LYRM9A8MSI8 78 aa15.32■□□□□ 0.04
CNEP1R1-202ENST00000427478 UBE2D1P51668 147 aa15.32■□□□□ 0.04
CNEP1R1-202ENST00000427478 PRIMA1Q86XR5 153 aa15.32■□□□□ 0.04
CNEP1R1-202ENST00000427478 UBE2L6O14933 153 aa15.31■□□□□ 0.04
CNEP1R1-202ENST00000427478 H3BRM9 83 aa15.3■□□□□ 0.04
CNEP1R1-202ENST00000427478 FBN1P35555 2871 aaKnown RBP15.3■□□□□ 0.04
CNEP1R1-202ENST00000427478 SHISA2Q6UWI4 295 aa15.3■□□□□ 0.04
CNEP1R1-202ENST00000427478 CSDC2Q9Y534 153 aaKnown RBP15.3■□□□□ 0.04
CNEP1R1-202ENST00000427478 BAHCC1Q9P281 2608 aa15.29■□□□□ 0.04
CNEP1R1-202ENST00000427478 KRTAP10-11P60412 298 aa15.29■□□□□ 0.04
CNEP1R1-202ENST00000427478 AMMECR1LQ6DCA0 310 aa15.29■□□□□ 0.04
CNEP1R1-202ENST00000427478 RAB37Q96AX2 223 aa15.29■□□□□ 0.04
CNEP1R1-202ENST00000427478 GEMIN7Q9H840 131 aaKnown RBP15.29■□□□□ 0.04
CNEP1R1-202ENST00000427478 NBEAL2Q6ZNJ1 2754 aa15.29■□□□□ 0.04
CNEP1R1-202ENST00000427478 Q8NAQ8 132 aa15.29■□□□□ 0.04
CNEP1R1-202ENST00000427478 GYPEP15421 78 aa15.28■□□□□ 0.04
CNEP1R1-202ENST00000427478 OR5A1Q8NGJ0 315 aa15.28■□□□□ 0.04
CNEP1R1-202ENST00000427478 TRAV8-3A0A0A6YYJ7 113 aa15.28■□□□□ 0.04
CNEP1R1-202ENST00000427478 A0A0J9YY99 117 aa15.28■□□□□ 0.04
CNEP1R1-202ENST00000427478 MIFP14174 115 aa15.28■□□□□ 0.04
CNEP1R1-202ENST00000427478 VAMP3Q15836 100 aa15.28■□□□□ 0.04
CNEP1R1-202ENST00000427478 RNF183Q96D59 192 aa15.28■□□□□ 0.04
CNEP1R1-202ENST00000427478 NHP2Q9NX24 153 aaKnown RBP15.28■□□□□ 0.04
CNEP1R1-202ENST00000427478 SMAGPQ0VAQ4 97 aa15.27■□□□□ 0.04
CNEP1R1-202ENST00000427478 K7ERJ3 54 aa15.26■□□□□ 0.03
CNEP1R1-202ENST00000427478 SMIM13P0DJ93 91 aa15.26■□□□□ 0.03
CNEP1R1-202ENST00000427478 IGHV3-30-3P0DP02 117 aa15.26■□□□□ 0.03
CNEP1R1-202ENST00000427478 CDC42SE2Q9NRR3 84 aa15.26■□□□□ 0.03
CNEP1R1-202ENST00000427478 PRO0255Q9UI72 69 aa15.26■□□□□ 0.03
CNEP1R1-202ENST00000427478 TRBV6-8A0A0A6YYG3 113 aa15.26■□□□□ 0.03
CNEP1R1-202ENST00000427478 SPINK8P0C7L1 97 aa15.26■□□□□ 0.03
CNEP1R1-202ENST00000427478 CELA1Q9UNI1 258 aa15.26■□□□□ 0.03
CNEP1R1-202ENST00000427478 GAGE6Q13070 117 aa15.25■□□□□ 0.03
CNEP1R1-202ENST00000427478 TMEM101Q96IK0 257 aa15.25■□□□□ 0.03
CNEP1R1-202ENST00000427478 C9orf118A6NHY6 69 aa15.25■□□□□ 0.03
CNEP1R1-202ENST00000427478 DAD1P61803 113 aa15.25■□□□□ 0.03
CNEP1R1-202ENST00000427478 SRSF9Q13242 221 aaKnown RBP eCLIP15.25■□□□□ 0.03
CNEP1R1-202ENST00000427478 NAA38Q9BRA0 125 aaKnown RBP15.25■□□□□ 0.03
CNEP1R1-202ENST00000427478 TRAV13-1A0A0B4J241 112 aa15.24■□□□□ 0.03
CNEP1R1-202ENST00000427478 IGHV1-58A0A0C4DH39 117 aa15.24■□□□□ 0.03
CNEP1R1-202ENST00000427478 TIRAPP58753 221 aa15.24■□□□□ 0.03
CNEP1R1-202ENST00000427478 COX6A2Q02221 97 aa15.24■□□□□ 0.03
CNEP1R1-202ENST00000427478 CDKN2A-AS1Q9UH64 79 aa15.24■□□□□ 0.03
CNEP1R1-202ENST00000427478 H7C423 109 aa15.23■□□□□ 0.03
CNEP1R1-202ENST00000427478 LINC00242Q5T6M2 205 aa15.23■□□□□ 0.03
CNEP1R1-202ENST00000427478 ATP6V0E2Q8NHE4 81 aa15.23■□□□□ 0.03
CNEP1R1-202ENST00000427478 CHCHD5Q9BSY4 110 aa15.23■□□□□ 0.03
CNEP1R1-202ENST00000427478 H3BUT2 72 aa15.22■□□□□ 0.03
CNEP1R1-202ENST00000427478 VSIG2Q96IQ7 327 aa15.22■□□□□ 0.03
CNEP1R1-202ENST00000427478 IGLV5-45A0A087WSX0 123 aa15.22■□□□□ 0.03
CNEP1R1-202ENST00000427478 PAX4O43316 350 aa15.22■□□□□ 0.03
CNEP1R1-202ENST00000427478 UBE2V1Q13404 147 aa15.22■□□□□ 0.03
CNEP1R1-202ENST00000427478 A8MZ25 164 aa15.21■□□□□ 0.03
CNEP1R1-202ENST00000427478 HERVK_113P63121 156 aa15.21■□□□□ 0.03
CNEP1R1-202ENST00000427478 EGFEM1PQ0D2K5 195 aa15.21■□□□□ 0.03
CNEP1R1-202ENST00000427478 A0A096LPF7 62 aa15.2■□□□□ 0.02
CNEP1R1-202ENST00000427478 CCL25O15444 150 aa15.2■□□□□ 0.02
CNEP1R1-202ENST00000427478 FAM19A3Q7Z5A8 133 aa15.2■□□□□ 0.02
CNEP1R1-202ENST00000427478 C10orf126Q8N4M7 172 aa15.2■□□□□ 0.02
CNEP1R1-202ENST00000427478 SPANXB1Q9NS25 103 aaPredicted RBP15.2■□□□□ 0.02
CNEP1R1-202ENST00000427478 C12orf74Q32Q52 190 aa15.19■□□□□ 0.02
CNEP1R1-202ENST00000427478 SPART-AS1P0CW21 52 aa15.19■□□□□ 0.02
CNEP1R1-202ENST00000427478 IGLV4-60A0A075B6I1 120 aa15.18■□□□□ 0.02
CNEP1R1-202ENST00000427478 ATP5G1P05496 136 aa15.17■□□□□ 0.02
CNEP1R1-202ENST00000427478 RETNQ9HD89 108 aa15.17■□□□□ 0.02
CNEP1R1-202ENST00000427478 STAB1Q9NY15 2570 aa15.17■□□□□ 0.02
CNEP1R1-202ENST00000427478 A0A0J9YXY3 114 aa15.16■□□□□ 0.02
CNEP1R1-202ENST00000427478 NDUFA12Q9UI09 145 aa15.16■□□□□ 0.02
CNEP1R1-202ENST00000427478 G3V4G9 280 aa15.16■□□□□ 0.02
CNEP1R1-202ENST00000427478 IGHV3-30P01768 117 aa15.16■□□□□ 0.02
CNEP1R1-202ENST00000427478 IGHV3-30-5P0DP03 117 aa15.16■□□□□ 0.02
CNEP1R1-202ENST00000427478 HTN3P15516 51 aa15.15■□□□□ 0.02
CNEP1R1-202ENST00000427478 IGKV3OR2-268A0A0C4DH90 116 aa15.14■□□□□ 0.01
CNEP1R1-202ENST00000427478 TMEM238LA0A1B0GVL6 79 aa15.14■□□□□ 0.01
CNEP1R1-202ENST00000427478 A6NJY4 79 aa15.14■□□□□ 0.01
CNEP1R1-202ENST00000427478 F5H768 121 aa15.14■□□□□ 0.01
CNEP1R1-202ENST00000427478 TRAV26-1A0A087WT03 109 aa15.14■□□□□ 0.01
CNEP1R1-202ENST00000427478 A0A1B0GWB2 263 aa15.14■□□□□ 0.01
CNEP1R1-202ENST00000427478 SAMD5Q5TGI4 173 aa15.14■□□□□ 0.01
CNEP1R1-202ENST00000427478 ZFAND6Q6FIF0 208 aa15.14■□□□□ 0.01
CNEP1R1-202ENST00000427478 A0A1W2PPM0 123 aa15.13■□□□□ 0.01
CNEP1R1-202ENST00000427478 CMYA5Q8N3K9 4069 aa15.13■□□□□ 0.01
CNEP1R1-202ENST00000427478 SMIM1B2RUZ4 78 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms