RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 HMGB3O15347 200 aaKnown RBP-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 ARF4P18085 180 aaPredicted RBP-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 FABP9Q0Z7S8 132 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 MED21Q13503 144 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 FLOT2Q14254 428 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 CLLU1Q5K131 121 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 NCBP2-AS2Q69YL0 99 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 LINC00305Q7Z4B0 112 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 CAPSLQ8WWF8 208 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 ANKRD36BP1Q96IX9 119 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 C20orf24Q9BUV8 137 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 POLE4Q9NR33 117 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 GCNT4Q9P109 453 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 MYH1P12882 1939 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 MAP3K5Q99683 1374 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 SYNJ2BP-COX16A0A087WUM0 186 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 C5orf58C9J3I9 102 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 CHKB-CPT1BH3BT56 60 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 H7C2Y5 167 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 IFNA17P01571 189 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 CRYGCP07315 174 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 SAA2P0DJI9 122 aaPredicted RBP-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 FCER1GP30273 86 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 DYNLT3P51808 116 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 MAGOHP61326 146 aaKnown RBP-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 ATP6V0D1P61421 351 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 BEX5Q5H9J7 111 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 BCL2L15Q5TBC7 163 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 TTC33Q6PID6 262 aaPredicted RBP-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 TMED4Q7Z7H5 227 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 TRAPPC5Q8IUR0 188 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCDC146Q8IYE0 955 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 CNPY4Q8N129 248 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 TMEM86BQ8N661 226 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 AP3S1Q92572 193 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 MAGOHBQ96A72 148 aaKnown RBP-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 CFAP53Q96M91 514 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 ARPC5LQ9BPX5 153 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 ZC4H2Q9NQZ6 224 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 RPRMQ9NS64 109 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 ATXN10Q9UBB4 475 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 MAD2L2Q9UI95 211 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 SNX5Q9Y5X3 404 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 NCAPD3P42695 1498 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 NEO1Q92859 1461 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 RGPD1P0DJD0 1748 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 SCRIBQ14160 1630 aa-2.93□□□□□ -2.88
RNU4-88P-201ENST00000411220 KCNE1BA0A087WTH5 132 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 IGHV1-24A0A0C4DH33 117 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 STX6O43752 255 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 CIB2O75838 187 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 GCGP01275 180 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 HLA-DRAP01903 254 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 ANXA5P08758 320 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 UCHL3P15374 230 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 SYT1P21579 422 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 NME5P56597 212 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 GNGT1P63211 74 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 MRPL23Q16540 153 aaKnown RBP-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 RRN3P1Q2M238 152 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 C9orf153Q5TBE3 101 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 MINOS1Q5TGZ0 78 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 TTC23Q5W5X9 447 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 PDCL2Q8N4E4 241 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 TEX37Q96LM6 180 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 TIPINQ9BVW5 301 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 RHPN1-AS1Q9BWJ2 59 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 FAM107BQ9H098 131 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 SPANXB1Q9NS25 103 aaPredicted RBP-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 HPF1Q9NWY4 346 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 AP4S1Q9Y587 144 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 DAPK1P53355 1430 aa-2.94□□□□□ -2.88
RNU4-88P-201ENST00000411220 MRC2Q9UBG0 1479 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 MAP1LC3B2A6NCE7 125 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 SNTNA6NMZ2 147 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 EFCAB9A8MZ26 197 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 J3QRK9 145 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 K7EPI3 171 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 K7ERJ3 54 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 APOEP02649 317 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 S100A8P05109 93 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 CSN2P05814 226 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 H2BFSP57053 126 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 AP3S2P59780 193 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 UBE2G1P62253 170 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 NUCB2P80303 420 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 RAB11BQ15907 218 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 CLVS2Q5SYC1 327 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 SFTA2Q6UW10 78 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 UQCC3Q6UW78 93 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 MORN4Q8NDC4 146 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 DYNLRB2Q8TF09 96 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 BTF3L4Q96K17 158 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 NXT2Q9NPJ8 142 aaKnown RBP-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 MADDQ8WXG6 1647 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 C3P01024 1663 aa-2.95□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCDC88BA6NC98 1476 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 ARAP2Q8WZ64 1704 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 FAM24AA6NFZ4 105 aa-2.96□□□□□ -2.88
RNU4-88P-201ENST00000411220 H0Y9P7 68 aa-2.96□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms