RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.47□□□□□ -1.69
TRAPPC13-202ENST00000399438 Q8N6K4 173 aa4.47□□□□□ -1.69
TRAPPC13-202ENST00000399438 CCL19Q99731 98 aa4.47□□□□□ -1.69
TRAPPC13-202ENST00000399438 TMEM14CQ9P0S9 112 aa4.47□□□□□ -1.69
TRAPPC13-202ENST00000399438 ADAMTSL4-AS1Q5T5F5 129 aa4.47□□□□□ -1.69
TRAPPC13-202ENST00000399438 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-202ENST00000399438 A0A096LNJ9 63 aa4.46□□□□□ -1.69
TRAPPC13-202ENST00000399438 H3BMG7 143 aa4.46□□□□□ -1.69
TRAPPC13-202ENST00000399438 SUMO4Q6EEV6 95 aa4.46□□□□□ -1.69
TRAPPC13-202ENST00000399438 FAM104AQ969W3 186 aa4.46□□□□□ -1.69
TRAPPC13-202ENST00000399438 RAB37Q96AX2 223 aa4.46□□□□□ -1.69
TRAPPC13-202ENST00000399438 LINC00526Q96FQ7 95 aa4.46□□□□□ -1.69
TRAPPC13-202ENST00000399438 SPANXDQ9BXN6 97 aa4.46□□□□□ -1.69
TRAPPC13-202ENST00000399438 IGKV3D-20A0A0C4DH25 116 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 UBE2L6O14933 153 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 ZNF575Q86XF7 245 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 CSNK1G2-AS1Q8NCQ2 148 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 MRPS16Q9Y3D3 137 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 TRAV13-1A0A0B4J241 112 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 OOSP1A8MZH6 123 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 KRTAP10-9P60411 292 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 ATP5G2Q06055 141 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 DEFB136Q30KP8 78 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 ZC2HC1BQ5TFG8 222 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 C5orf56Q8N8D9 126 aa4.46□□□□□ -1.7
TRAPPC13-202ENST00000399438 SETXQ7Z333 2677 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 TRAV12-2A0A075B6T6 113 aa4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 MGPP08493 103 aa4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 SCGB1C2P0DMR2 95 aa4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 RNASE4P34096 147 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 EGFEM1PQ0D2K5 195 aa4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 EBI3Q14213 229 aa4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 GNRH2O43555 120 aa4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
TRAPPC13-202ENST00000399438 CHTF8P0CG12 524 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 SPANXN1Q5VSR9 72 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 C14orf178Q8N769 122 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 TIMM17AQ99595 171 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 RNF5Q99942 180 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 SND1-IT1Q9HBX3 110 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 TMEM256-PLSCR3K7ERE1 68 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 IGHV1-69P01742 117 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 ZNF688P0C7X2 276 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 LGALS3P17931 250 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 C18orf65Q6ZTR6 163 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 GTSCR1Q86UQ5 136 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 OR4X2Q8NGF9 303 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 RPL39LQ96EH5 51 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 TMEM262E9PQX1 116 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 UQCRQO14949 82 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 CRYGAP11844 174 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 S100A4P26447 101 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 MINOS1Q5TGZ0 78 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 SFTA2Q6UW10 78 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 TEN1Q86WV5 123 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 C10orf126Q8N4M7 172 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 TEP1Q99973 2627 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 MINOS1-NBL1R4GNA1 71 aa4.44□□□□□ -1.7
TRAPPC13-202ENST00000399438 IGKV2D-26A0A0A0MRZ7 120 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 RPL37AP8A6NKH3 93 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 K7ERJ3 54 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 C10orf25Q5T742 122 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 C9orf153Q5TBE3 101 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 FAM74A4Q5TZK3 123 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 VWFP04275 2813 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 IGHV4OR15-8A0A075B7B6 117 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 NDUFC2-KCTD14E9PQ53 114 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 M0R2P5 195 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 VSIG2Q96IQ7 327 aa4.43□□□□□ -1.7
TRAPPC13-202ENST00000399438 IGHV3-73A0A0B4J1V6 119 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 DEFB112Q30KQ8 113 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 RHPN1-AS1Q9BWJ2 59 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 GFRA4Q9GZZ7 299 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 KLK9Q9UKQ9 250 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 MOB4Q9Y3A3 225 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 UNC79Q9P2D8 2635 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 TRBV20-1A0A075B6N2 111 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 TRAV12-3A0A0B4J271 114 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 KRTAP4-16G5E9R7 235 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 HLA-DRB4P13762 266 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 FCER1GP30273 86 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 LGALS9BQ3B8N2 356 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 LGALS9CQ6DKI2 356 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 IFI27L1Q96BM0 104 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 CHCHD1Q96BP2 118 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 HLA-DRB4X5D2U9 266 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 MUC4Q99102 2169 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 K7EP34 96 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 DUSP14O95147 198 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 PDE6HQ13956 83 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 CEMP1Q6PRD7 247 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 NFE4Q86UQ8 179 aa4.42□□□□□ -1.7
TRAPPC13-202ENST00000399438 ATRQ13535 2644 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 IGHV4-4A0A075B6R2 117 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 BVES-AS1Q5T3Y7 98 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 C10orf105Q8TEF2 133 aa4.41□□□□□ -1.7
TRAPPC13-202ENST00000399438 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms