RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 J3QKU1 62 aa7.59□□□□□ -1.19
CPSF1P1-201ENST00000397477 DEFB4AO15263 64 aa7.59□□□□□ -1.19
CPSF1P1-201ENST00000397477 INSL3P51460 131 aa7.59□□□□□ -1.19
CPSF1P1-201ENST00000397477 LYRM7Q5U5X0 104 aa7.59□□□□□ -1.19
CPSF1P1-201ENST00000397477 PRO1854Q9UHT4 67 aa7.59□□□□□ -1.19
CPSF1P1-201ENST00000397477 UBR5O95071 2799 aaPredicted RBP7.59□□□□□ -1.19
CPSF1P1-201ENST00000397477 C9JAW5 83 aa7.58□□□□□ -1.2
CPSF1P1-201ENST00000397477 HTN3P15516 51 aa7.58□□□□□ -1.2
CPSF1P1-201ENST00000397477 LOC100131303A0A0U1RQF7 123 aa7.58□□□□□ -1.2
CPSF1P1-201ENST00000397477 LEPROTO15243 131 aa7.58□□□□□ -1.2
CPSF1P1-201ENST00000397477 NDUFA11Q86Y39 141 aa7.58□□□□□ -1.2
CPSF1P1-201ENST00000397477 CDKN2A-AS1Q9UH64 79 aa7.58□□□□□ -1.2
CPSF1P1-201ENST00000397477 TMEM223A0PJW6 202 aa7.57□□□□□ -1.2
CPSF1P1-201ENST00000397477 CFC1BP0CG36 223 aa7.57□□□□□ -1.2
CPSF1P1-201ENST00000397477 CFC1P0CG37 223 aa7.57□□□□□ -1.2
CPSF1P1-201ENST00000397477 CLPSL2Q6UWE3 100 aa7.57□□□□□ -1.2
CPSF1P1-201ENST00000397477 TEX29Q8N6K0 151 aa7.57□□□□□ -1.2
CPSF1P1-201ENST00000397477 FSHBP01225 129 aa7.57□□□□□ -1.2
CPSF1P1-201ENST00000397477 LRRC75A-AS1Q8N1F1 130 aa7.57□□□□□ -1.2
CPSF1P1-201ENST00000397477 F8W1H4 67 aa7.56□□□□□ -1.2
CPSF1P1-201ENST00000397477 C1orf158Q8N1D5 194 aa7.56□□□□□ -1.2
CPSF1P1-201ENST00000397477 MAST4O15021 2626 aa7.56□□□□□ -1.2
CPSF1P1-201ENST00000397477 SLC25A29Q8N8R3 303 aa7.56□□□□□ -1.2
CPSF1P1-201ENST00000397477 TMEM101Q96IK0 257 aa7.56□□□□□ -1.2
CPSF1P1-201ENST00000397477 PRIMA1Q86XR5 153 aa7.56□□□□□ -1.2
CPSF1P1-201ENST00000397477 BAHCC1Q9P281 2608 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 A0A0J9YXY3 114 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 Q9H8V8 135 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 CR1P17927 2039 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 TCL1BO95988 128 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 IGHV3-30P01768 117 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 LINC00694P0DN24 101 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 IGHV3-30-5P0DP03 117 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 CIRBPQ14011 172 aaKnown RBP7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 NFE4Q86UQ8 179 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 C10orf126Q8N4M7 172 aa7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 RPL32P62910 135 aaKnown RBP7.55□□□□□ -1.2
CPSF1P1-201ENST00000397477 NBPF19A0A087WUL8 3843 aa7.54□□□□□ -1.2
CPSF1P1-201ENST00000397477 POM121L12Q8N7R1 296 aa7.54□□□□□ -1.2
CPSF1P1-201ENST00000397477 ANAPC13Q9BS18 74 aa7.54□□□□□ -1.2
CPSF1P1-201ENST00000397477 K7EQD1 137 aa7.54□□□□□ -1.2
CPSF1P1-201ENST00000397477 UBE2D4Q9Y2X8 147 aa7.54□□□□□ -1.2
CPSF1P1-201ENST00000397477 LINC00482Q8N8I6 264 aa7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 CHCHD7Q9BUK0 85 aa7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 B5MCH6 92 aa7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 C11orf72Q8NBR9 251 aa7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 SPANXA1Q9NS26 97 aa7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 IGHV1-58A0A0C4DH39 117 aa7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 COX6CP09669 75 aa7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 SPANXB1Q9NS25 103 aaPredicted RBP7.53□□□□□ -1.2
CPSF1P1-201ENST00000397477 RNF152Q8N8N0 203 aa7.52□□□□□ -1.21
CPSF1P1-201ENST00000397477 TENM4Q6N022 2769 aa7.52□□□□□ -1.21
CPSF1P1-201ENST00000397477 COX6A2Q02221 97 aa7.52□□□□□ -1.21
CPSF1P1-201ENST00000397477 ADAMTSL4-AS1Q5T5F5 129 aa7.52□□□□□ -1.21
CPSF1P1-201ENST00000397477 C5orf38Q86SI9 138 aa7.52□□□□□ -1.21
CPSF1P1-201ENST00000397477 TMEM243Q9BU79 118 aa7.52□□□□□ -1.21
CPSF1P1-201ENST00000397477 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 CRLF1O75462 422 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 PFN2P35080 140 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 TMEM263Q8WUH6 116 aaKnown RBP7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 RS1O15537 224 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 VSIG2Q96IQ7 327 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 SCGB1A1P11684 91 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 UBE2D1P51668 147 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 LINC00158P58513 81 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 Q8N2B8 174 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 SMIM20Q8N5G0 67 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 TMEM86BQ8N661 226 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 CLEC2BQ92478 149 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 F8P00451 2351 aa7.51□□□□□ -1.21
CPSF1P1-201ENST00000397477 INAFM1C9JVW0 142 aa7.5□□□□□ -1.21
CPSF1P1-201ENST00000397477 SLC25A20O43772 301 aa7.5□□□□□ -1.21
CPSF1P1-201ENST00000397477 OR13C6PQ8NH95 151 aa7.5□□□□□ -1.21
CPSF1P1-201ENST00000397477 C1QTNF4Q9BXJ3 329 aa7.5□□□□□ -1.21
CPSF1P1-201ENST00000397477 TRAV25A0A0B4J276 109 aa7.49□□□□□ -1.21
CPSF1P1-201ENST00000397477 HERV-K104P63124 156 aa7.49□□□□□ -1.21
CPSF1P1-201ENST00000397477 RNF183Q96D59 192 aa7.49□□□□□ -1.21
CPSF1P1-201ENST00000397477 DNAJC30Q96LL9 226 aa7.49□□□□□ -1.21
CPSF1P1-201ENST00000397477 NTN5Q8WTR8 489 aaPredicted RBP7.49□□□□□ -1.21
CPSF1P1-201ENST00000397477 IGHV3-33P01772 117 aa7.49□□□□□ -1.21
CPSF1P1-201ENST00000397477 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
CPSF1P1-201ENST00000397477 DEFB135Q30KP9 77 aa7.49□□□□□ -1.21
CPSF1P1-201ENST00000397477 TINCRA0A1B0GVN0 87 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 XCL1P47992 114 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 ANKRD29Q8N6D5 301 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 PYGO1Q9Y3Y4 419 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 HERVK_113P63121 156 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 SHISA2Q6UWI4 295 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 IGLV10-54A0A075B6I4 117 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 C2orf82Q6UX34 121 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 AMELXQ99217 191 aa7.48□□□□□ -1.21
CPSF1P1-201ENST00000397477 TRBV20-1A0A075B6N2 111 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 GYPEP15421 78 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 FOXI1Q12951 378 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 C16orf74Q96GX8 76 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 TRAV4A0A0B4J268 109 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 ATXN8Q156A1 80 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms