RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 J3QR89 54 aa4.35□□□□□ -1.71
RAPGEF4-203ENST00000397087 DEFB131AP59861 70 aa4.35□□□□□ -1.71
RAPGEF4-203ENST00000397087 UBE2D3P61077 147 aa4.35□□□□□ -1.71
RAPGEF4-203ENST00000397087 UBE2D2P62837 147 aa4.35□□□□□ -1.71
RAPGEF4-203ENST00000397087 CSNK1G2-AS1Q8NCQ2 148 aa4.35□□□□□ -1.71
RAPGEF4-203ENST00000397087 UBE2D4Q9Y2X8 147 aa4.35□□□□□ -1.71
RAPGEF4-203ENST00000397087 ITPR3Q14573 2671 aa4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 MUC4Q99102 2169 aa4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 IGLV5-39A0A0G2JS06 123 aa4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 PROK1P58294 105 aa4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 CELSR2Q9HCU4 2923 aa4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 GCN1Q92616 2671 aaKnown RBP4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 SCGB1A1P11684 91 aa4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 ODF3L2Q3SX64 289 aa4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 LINC01587Q99440 93 aa4.34□□□□□ -1.71
RAPGEF4-203ENST00000397087 A0A0J9YY99 117 aa4.34□□□□□ -1.72
RAPGEF4-203ENST00000397087 CCL24O00175 119 aa4.34□□□□□ -1.72
RAPGEF4-203ENST00000397087 RRN3P1Q2M238 152 aa4.34□□□□□ -1.72
RAPGEF4-203ENST00000397087 TMEM61Q8N0U2 210 aa4.34□□□□□ -1.72
RAPGEF4-203ENST00000397087 XCL2Q9UBD3 114 aa4.34□□□□□ -1.72
RAPGEF4-203ENST00000397087 USP24Q9UPU5 2620 aa4.34□□□□□ -1.72
RAPGEF4-203ENST00000397087 CD28P10747 220 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 GAGE13Q4V321 117 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 HIST2H2BCQ6DN03 193 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 IGLL5B9A064 214 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 IGHV3-30P01768 117 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 IGHV3-30-5P0DP03 117 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 SLURP1P55000 103 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 C12orf74Q32Q52 190 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 TMEM238C9JI98 176 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 ZNF22P17026 224 aaPredicted RBP4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 KRTAP10-9P60411 292 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 DAND5Q8N907 189 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 C11orf68Q9H3H3 251 aaKnown RBP4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 TOMM7Q9P0U1 55 aa4.33□□□□□ -1.72
RAPGEF4-203ENST00000397087 IGHV1-58A0A0C4DH39 117 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 A8MZ25 164 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 ZFAND6Q6FIF0 208 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 TNFRSF18Q9Y5U5 241 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 NDUFA1O15239 70 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 HERV-K104P63124 156 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 C1orf158Q8N1D5 194 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 PLAC8L1A1L4L8 177 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 K7EQD1 137 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 HERVK_113P63121 156 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 C18orf65Q6ZTR6 163 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 LINC01006Q8NI28 216 aa4.32□□□□□ -1.72
RAPGEF4-203ENST00000397087 GEMIN7Q9H840 131 aaKnown RBP4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 A0A0J9YXV3 536 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 J3QQQ9 107 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 ZNRF2Q8NHG8 242 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 LITAFQ99732 161 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 ESM1Q9NQ30 184 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 TRAV13-1A0A0B4J241 112 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 RPL35AP18077 110 aaKnown RBP4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 PRO0461Q9UI25 63 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 G3V4G9 280 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 FAM222AQ5U5X8 452 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 STHQ8IWL8 128 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 LINC00482Q8N8I6 264 aa4.31□□□□□ -1.72
RAPGEF4-203ENST00000397087 TRGV1A0A0A0MS02 117 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 TRAV8-3A0A0A6YYJ7 113 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 TRBV30A0A0K0K1B3 111 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 PF4P02776 101 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 MEIG1Q5JSS6 88 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 VSIG2Q96IQ7 327 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 LYRM9A8MSI8 78 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 C9JAW5 83 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 ATRQ13535 2644 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 HELZ2Q9BYK8 2649 aaKnown RBP4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 SPINK8P0C7L1 97 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 AZU1P20160 251 aa4.3□□□□□ -1.72
RAPGEF4-203ENST00000397087 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 H3BNG1 76 aa4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 RPL36AP83881 106 aaKnown RBP4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 MIAQ16674 131 aa4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 C9orf66Q5T8R8 295 aa4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 RPL36ALQ969Q0 106 aaKnown RBP4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 TEP1Q99973 2627 aaKnown RBP4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 DEFB121Q5J5C9 76 aa4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 CFAP161Q6P656 301 aa4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 C10orf126Q8N4M7 172 aa4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
RAPGEF4-203ENST00000397087 A0A096LPF7 62 aa4.28□□□□□ -1.72
RAPGEF4-203ENST00000397087 F8WDY8 70 aa4.28□□□□□ -1.72
RAPGEF4-203ENST00000397087 SIGMAR1Q99720 223 aa4.28□□□□□ -1.72
RAPGEF4-203ENST00000397087 TRGV2A0A075B6R0 118 aa4.28□□□□□ -1.72
RAPGEF4-203ENST00000397087 LOC100131303A0A0U1RQF7 123 aa4.28□□□□□ -1.72
RAPGEF4-203ENST00000397087 WFDC9Q8NEX5 89 aa4.28□□□□□ -1.72
RAPGEF4-203ENST00000397087 WFDC11Q8NEX6 87 aa4.28□□□□□ -1.72
RAPGEF4-203ENST00000397087 SPATA25Q9BR10 227 aa4.28□□□□□ -1.72
RAPGEF4-203ENST00000397087 GAGE12JA6NER3 117 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 GAGE4Q13068 117 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 GAGE5Q13069 117 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 MRPL23Q16540 153 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms