RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 USP24Q9UPU5 2620 aa8.4□□□□□ -1.07
ATP2A1-202ENST00000395503 CRLF1O75462 422 aa8.4□□□□□ -1.07
ATP2A1-202ENST00000395503 LINC00694P0DN24 101 aa8.4□□□□□ -1.07
ATP2A1-202ENST00000395503 RPL13AP40429 203 aaKnown RBP8.4□□□□□ -1.07
ATP2A1-202ENST00000395503 RNF183Q96D59 192 aa8.4□□□□□ -1.07
ATP2A1-202ENST00000395503 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.07
ATP2A1-202ENST00000395503 NOTCH2Q04721 2471 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 AKAP9Q99996 3911 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 ITPR3Q14573 2671 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 SETXQ7Z333 2677 aaKnown RBP8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 TMEM89A2RUT3 159 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 GAGE12JA6NER3 117 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 GAGE4Q13068 117 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 GAGE5Q13069 117 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 Q9H8V8 135 aa8.39□□□□□ -1.07
ATP2A1-202ENST00000395503 SHISA2Q6UWI4 295 aa8.38□□□□□ -1.07
ATP2A1-202ENST00000395503 PLA2G2AP14555 144 aa8.38□□□□□ -1.07
ATP2A1-202ENST00000395503 PYGO1Q9Y3Y4 419 aa8.38□□□□□ -1.07
ATP2A1-202ENST00000395503 TRAV4A0A0B4J268 109 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 INSP01308 110 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 Q6ZTI0 123 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 STHQ8IWL8 128 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 WFDC10AQ9H1F0 79 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 DSCR9P59020 149 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 MIAQ16674 131 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 MEIG1Q5JSS6 88 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 TEX29Q8N6K0 151 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 Q96MF0 132 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 ANAPC13Q9BS18 74 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 SBSPONQ8IVN8 264 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 C11orf72Q8NBR9 251 aa8.37□□□□□ -1.07
ATP2A1-202ENST00000395503 TINCRA0A1B0GVN0 87 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 COX6CP09669 75 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 DEFB114Q30KQ6 69 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 TTC32Q5I0X7 151 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 ZFAND6Q6FIF0 208 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 APCP25054 2843 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 A0A096LNT2 108 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 SNCGO76070 127 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 HERV-K104P63124 156 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 SPANXA1Q9NS26 97 aa8.36□□□□□ -1.07
ATP2A1-202ENST00000395503 H7C423 109 aa8.35□□□□□ -1.07
ATP2A1-202ENST00000395503 RPL35AP18077 110 aaKnown RBP8.35□□□□□ -1.07
ATP2A1-202ENST00000395503 UBE2WQ96B02 151 aa8.35□□□□□ -1.07
ATP2A1-202ENST00000395503 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
ATP2A1-202ENST00000395503 ODF3L2Q3SX64 289 aa8.35□□□□□ -1.07
ATP2A1-202ENST00000395503 NOP10Q9NPE3 64 aaKnown RBP8.35□□□□□ -1.07
ATP2A1-202ENST00000395503 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 HIST2H2BCQ6DN03 193 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 GCN1Q92616 2671 aaKnown RBP8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 LOC100131303A0A0U1RQF7 123 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 J3QLI3 93 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 PRIMA1Q86XR5 153 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 HIVEP2P31629 2446 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 TMEM262E9PQX1 116 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 GAGE2BQ13066 116 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 GAGE2EQ4V326 116 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 C15orf53Q8NAA6 179 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.07
ATP2A1-202ENST00000395503 TRBV30A0A0K0K1B3 111 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 C1orf158Q8N1D5 194 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 GAGE7O76087 117 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 PIK3CD-AS1Q5SR53 167 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 LINC00242Q5T6M2 205 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 SMIM20Q8N5G0 67 aa8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 BBC3Q96PG8 261 aaPredicted RBP8.33□□□□□ -1.08
ATP2A1-202ENST00000395503 Q8N2B8 174 aa8.32□□□□□ -1.08
ATP2A1-202ENST00000395503 NBPF19A0A087WUL8 3843 aa8.32□□□□□ -1.08
ATP2A1-202ENST00000395503 TRGV2A0A075B6R0 118 aa8.32□□□□□ -1.08
ATP2A1-202ENST00000395503 NTM-AS1Q6ZSK4 140 aa8.32□□□□□ -1.08
ATP2A1-202ENST00000395503 SPANXDQ9BXN6 97 aa8.32□□□□□ -1.08
ATP2A1-202ENST00000395503 SPANXCQ9NY87 97 aa8.32□□□□□ -1.08
ATP2A1-202ENST00000395503 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
ATP2A1-202ENST00000395503 LINC00308Q8TCZ7 52 aa8.31□□□□□ -1.08
ATP2A1-202ENST00000395503 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
ATP2A1-202ENST00000395503 C11orf68Q9H3H3 251 aaKnown RBP8.31□□□□□ -1.08
ATP2A1-202ENST00000395503 RS1O15537 224 aa8.31□□□□□ -1.08
ATP2A1-202ENST00000395503 C4orf3Q8WVX3 66 aa8.31□□□□□ -1.08
ATP2A1-202ENST00000395503 CITED2Q99967 270 aaPredicted RBP8.31□□□□□ -1.08
ATP2A1-202ENST00000395503 B5MCH6 92 aa8.3□□□□□ -1.08
ATP2A1-202ENST00000395503 SOSTDC1Q6X4U4 206 aa8.3□□□□□ -1.08
ATP2A1-202ENST00000395503 YAE1D1Q9NRH1 226 aa8.3□□□□□ -1.08
ATP2A1-202ENST00000395503 GAGE6Q13070 117 aa8.3□□□□□ -1.08
ATP2A1-202ENST00000395503 UBE2L6O14933 153 aa8.3□□□□□ -1.08
ATP2A1-202ENST00000395503 CCL24O00175 119 aa8.29□□□□□ -1.08
ATP2A1-202ENST00000395503 NDUFA1O15239 70 aa8.29□□□□□ -1.08
ATP2A1-202ENST00000395503 C3orf56Q8N813 242 aa8.29□□□□□ -1.08
ATP2A1-202ENST00000395503 CR1P17927 2039 aa8.29□□□□□ -1.08
ATP2A1-202ENST00000395503 SMIM1B2RUZ4 78 aa8.28□□□□□ -1.08
ATP2A1-202ENST00000395503 WFDC11Q8NEX6 87 aa8.28□□□□□ -1.08
ATP2A1-202ENST00000395503 K7EQD1 137 aa8.28□□□□□ -1.08
ATP2A1-202ENST00000395503 LST1O00453 97 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms