RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 SS18Q15532 418 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 SPANXA1Q9NS26 97 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 HIGD1BQ9P298 99 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 ATP5G1P05496 136 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 NEXN-AS1Q8NBZ9 246 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 C9JAW5 83 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 XCL1P47992 114 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 DAZ2Q13117 558 aaKnown RBP9.35□□□□□ -0.91
ERCC2-204ENST00000391945 DAZ4Q86SG3 579 aaKnown RBP9.35□□□□□ -0.91
ERCC2-204ENST00000391945 SLC25A29Q8N8R3 303 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 DAZ3Q9NR90 486 aaKnown RBP9.35□□□□□ -0.91
ERCC2-204ENST00000391945 CELSR2Q9HCU4 2923 aa9.35□□□□□ -0.91
ERCC2-204ENST00000391945 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 TRAV26-1A0A087WT03 109 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
ERCC2-204ENST00000391945 TRAV8-3A0A0A6YYJ7 113 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 Q6ZUT4 128 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 C1orf158Q8N1D5 194 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 PFN2P35080 140 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 PRO1854Q9UHT4 67 aa9.34□□□□□ -0.91
ERCC2-204ENST00000391945 MUC4Q99102 2169 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 POLR2KP53803 58 aaKnown RBP9.33□□□□□ -0.92
ERCC2-204ENST00000391945 SMIM20Q8N5G0 67 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 COPS9Q8WXC6 57 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 LINC00467Q9BRT7 94 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 UBR5O95071 2799 aaPredicted RBP9.33□□□□□ -0.92
ERCC2-204ENST00000391945 TEX48A0A1B0GUV7 120 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
ERCC2-204ENST00000391945 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 WFDC2Q14508 124 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 RBMY1FQ15415 496 aaKnown RBP9.33□□□□□ -0.92
ERCC2-204ENST00000391945 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 CRYBA4P53673 196 aa9.33□□□□□ -0.92
ERCC2-204ENST00000391945 SNCGO76070 127 aa9.32□□□□□ -0.92
ERCC2-204ENST00000391945 DAND5Q8N907 189 aa9.32□□□□□ -0.92
ERCC2-204ENST00000391945 LOC100131303A0A0U1RQF7 123 aa9.32□□□□□ -0.92
ERCC2-204ENST00000391945 A4D1N5 150 aa9.32□□□□□ -0.92
ERCC2-204ENST00000391945 PRB2P02812 416 aaPredicted RBP9.32□□□□□ -0.92
ERCC2-204ENST00000391945 HERVK_113P63121 156 aa9.32□□□□□ -0.92
ERCC2-204ENST00000391945 SETXQ7Z333 2677 aaKnown RBP9.32□□□□□ -0.92
ERCC2-204ENST00000391945 APCP25054 2843 aa9.31□□□□□ -0.92
ERCC2-204ENST00000391945 TRBV10-1A0A0K0K1A3 114 aa9.31□□□□□ -0.92
ERCC2-204ENST00000391945 PRO0255Q9UI72 69 aa9.31□□□□□ -0.92
ERCC2-204ENST00000391945 VSIG2Q96IQ7 327 aa9.3□□□□□ -0.92
ERCC2-204ENST00000391945 RS1O15537 224 aa9.3□□□□□ -0.92
ERCC2-204ENST00000391945 Q9H8V8 135 aa9.3□□□□□ -0.92
ERCC2-204ENST00000391945 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
ERCC2-204ENST00000391945 DNAL4O96015 105 aa9.3□□□□□ -0.92
ERCC2-204ENST00000391945 TSHBP01222 138 aa9.3□□□□□ -0.92
ERCC2-204ENST00000391945 MUSTN1Q8IVN3 82 aa9.3□□□□□ -0.92
ERCC2-204ENST00000391945 HERV-K104P63124 156 aa9.29□□□□□ -0.92
ERCC2-204ENST00000391945 IGLV2-18A0A075B6J9 118 aa9.29□□□□□ -0.92
ERCC2-204ENST00000391945 IGLV4-3A0A075B6K6 122 aa9.29□□□□□ -0.92
ERCC2-204ENST00000391945 LEPROTO15243 131 aa9.29□□□□□ -0.92
ERCC2-204ENST00000391945 SMG1Q96Q15 3661 aaKnown RBP9.29□□□□□ -0.92
ERCC2-204ENST00000391945 NXPH4O95158 308 aa9.29□□□□□ -0.92
ERCC2-204ENST00000391945 F8W1H4 67 aa9.28□□□□□ -0.92
ERCC2-204ENST00000391945 MRPL23Q16540 153 aaKnown RBP9.28□□□□□ -0.92
ERCC2-204ENST00000391945 FHL3Q13643 280 aa9.28□□□□□ -0.92
ERCC2-204ENST00000391945 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
ERCC2-204ENST00000391945 SHISA2Q6UWI4 295 aa9.28□□□□□ -0.92
ERCC2-204ENST00000391945 FAM19A4Q96LR4 140 aa9.27□□□□□ -0.92
ERCC2-204ENST00000391945 B5MCH6 92 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 COL6A5A8TX70 2615 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 CR1P17927 2039 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 IGHV3-30-3P0DP02 117 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 C2orf82Q6UX34 121 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 IGHV3-30P01768 117 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 IGHV3-33P01772 117 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 IGHV3-30-5P0DP03 117 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 Q6ZSN1 163 aa9.27□□□□□ -0.93
ERCC2-204ENST00000391945 IGHV4-28A0A0C4DH34 117 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 IGHV4-30-4P0DP06 118 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 TM2D2Q9BX73 214 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 A8MZ25 164 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 CFC1BP0CG36 223 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 CFC1P0CG37 223 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 UBE2DNLQ8IWF7 75 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 KRTAP1-1Q07627 177 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 ICOSQ9Y6W8 199 aa9.26□□□□□ -0.93
ERCC2-204ENST00000391945 ATXN8Q156A1 80 aa9.25□□□□□ -0.93
ERCC2-204ENST00000391945 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
ERCC2-204ENST00000391945 STAB1Q9NY15 2570 aa9.25□□□□□ -0.93
ERCC2-204ENST00000391945 KIF25-AS1Q9Y6Z4 181 aa9.25□□□□□ -0.93
ERCC2-204ENST00000391945 ZNF22P17026 224 aaPredicted RBP9.25□□□□□ -0.93
ERCC2-204ENST00000391945 PTH2Q96A98 100 aa9.25□□□□□ -0.93
ERCC2-204ENST00000391945 TRBV20-1A0A075B6N2 111 aa9.24□□□□□ -0.93
ERCC2-204ENST00000391945 SMIM9A6NGZ8 99 aa9.24□□□□□ -0.93
ERCC2-204ENST00000391945 C10orf126Q8N4M7 172 aa9.24□□□□□ -0.93
ERCC2-204ENST00000391945 ZMAT4Q9H898 229 aa9.24□□□□□ -0.93
ERCC2-204ENST00000391945 Q9HAA7 133 aa9.24□□□□□ -0.93
ERCC2-204ENST00000391945 DPH3Q96FX2 82 aa9.24□□□□□ -0.93
ERCC2-204ENST00000391945 Q9UF83 564 aa9.23□□□□□ -0.93
ERCC2-204ENST00000391945 KLK12Q9UKR0 248 aa9.23□□□□□ -0.93
ERCC2-204ENST00000391945 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
ERCC2-204ENST00000391945 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms