RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 A0A1B0GXF2 115 aa9.29□□□□□ -0.92
KCNQ3-201ENST00000388996 H7C423 109 aa9.29□□□□□ -0.92
KCNQ3-201ENST00000388996 HILS1P60008 231 aa9.28□□□□□ -0.92
KCNQ3-201ENST00000388996 NBEAL1Q6ZS30 2694 aa9.28□□□□□ -0.92
KCNQ3-201ENST00000388996 FSTL3O95633 263 aa9.28□□□□□ -0.92
KCNQ3-201ENST00000388996 C11orf1Q9H5F2 150 aa9.28□□□□□ -0.92
KCNQ3-201ENST00000388996 LINC00467Q9BRT7 94 aa9.28□□□□□ -0.92
KCNQ3-201ENST00000388996 WFDC11Q8NEX6 87 aa9.28□□□□□ -0.92
KCNQ3-201ENST00000388996 SETXQ7Z333 2677 aaKnown RBP9.27□□□□□ -0.92
KCNQ3-201ENST00000388996 IGF1P05019 195 aa9.27□□□□□ -0.92
KCNQ3-201ENST00000388996 CEMP1Q6PRD7 247 aaPredicted RBP9.27□□□□□ -0.92
KCNQ3-201ENST00000388996 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.92
KCNQ3-201ENST00000388996 CHCHD10Q8WYQ3 142 aaPredicted RBP9.27□□□□□ -0.93
KCNQ3-201ENST00000388996 SPATA25Q9BR10 227 aa9.27□□□□□ -0.93
KCNQ3-201ENST00000388996 J3KT08 172 aa9.27□□□□□ -0.93
KCNQ3-201ENST00000388996 DEFB114Q30KQ6 69 aa9.27□□□□□ -0.93
KCNQ3-201ENST00000388996 C19orf84I3L1E1 186 aa9.26□□□□□ -0.93
KCNQ3-201ENST00000388996 IGKV4-1P06312 121 aa9.26□□□□□ -0.93
KCNQ3-201ENST00000388996 WFDC2Q14508 124 aa9.26□□□□□ -0.93
KCNQ3-201ENST00000388996 IGKV2D-26A0A0A0MRZ7 120 aa9.26□□□□□ -0.93
KCNQ3-201ENST00000388996 WISP2O76076 250 aa9.25□□□□□ -0.93
KCNQ3-201ENST00000388996 CHD6Q8TD26 2715 aa9.25□□□□□ -0.93
KCNQ3-201ENST00000388996 K7EQG2 157 aa9.25□□□□□ -0.93
KCNQ3-201ENST00000388996 DEFB131BA0A096LNP1 70 aa9.25□□□□□ -0.93
KCNQ3-201ENST00000388996 FAM110AQ9BQ89 295 aa9.25□□□□□ -0.93
KCNQ3-201ENST00000388996 ZNF80P51504 273 aaPredicted RBP9.24□□□□□ -0.93
KCNQ3-201ENST00000388996 UPK3BQ9BT76 320 aa9.24□□□□□ -0.93
KCNQ3-201ENST00000388996 CFAP126Q5VTH2 177 aa9.24□□□□□ -0.93
KCNQ3-201ENST00000388996 TP53TG3Q9ULZ0 132 aa9.24□□□□□ -0.93
KCNQ3-201ENST00000388996 A0A0J9YXY3 114 aa9.24□□□□□ -0.93
KCNQ3-201ENST00000388996 FRMD6-AS1P0C7T7 363 aa9.24□□□□□ -0.93
KCNQ3-201ENST00000388996 FOXI1Q12951 378 aa9.24□□□□□ -0.93
KCNQ3-201ENST00000388996 A0A087WZ39 114 aa9.23□□□□□ -0.93
KCNQ3-201ENST00000388996 INAFM1C9JVW0 142 aa9.23□□□□□ -0.93
KCNQ3-201ENST00000388996 TAX1BP3O14907 124 aa9.23□□□□□ -0.93
KCNQ3-201ENST00000388996 ATP5EP2Q5VTU8 51 aa9.23□□□□□ -0.93
KCNQ3-201ENST00000388996 COL6A5A8TX70 2615 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 NSD1Q96L73 2696 aaPredicted RBP9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 IGLC6P0CF74 106 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 BPY2O14599 106 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 TCL1BO95988 128 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 MIFP14174 115 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 NEXN-AS1Q8NBZ9 246 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 SPANXB1Q9NS25 103 aaPredicted RBP9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 IGLV2-8P01709 118 aa9.22□□□□□ -0.93
KCNQ3-201ENST00000388996 SPATA12Q7Z6I5 190 aa9.21□□□□□ -0.93
KCNQ3-201ENST00000388996 SEC61GP60059 68 aa9.21□□□□□ -0.94
KCNQ3-201ENST00000388996 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.94
KCNQ3-201ENST00000388996 TEX15Q9BXT5 2789 aa9.21□□□□□ -0.94
KCNQ3-201ENST00000388996 A0A0U1RQV1 116 aa9.21□□□□□ -0.94
KCNQ3-201ENST00000388996 SHISA2Q6UWI4 295 aa9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 LY6LH3BQJ8 138 aa9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 EIF4EBP1Q13541 118 aaPredicted RBP9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 NDUFC2O95298 119 aa9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 LINC00322Q6ZN03 302 aaPredicted RBP9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 HIST2H2BDQ6DRA6 164 aa9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 Q6ZSV7 163 aa9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 M0QY20 66 aa9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 EBI3Q14213 229 aa9.2□□□□□ -0.94
KCNQ3-201ENST00000388996 TEX49A0A1B0GTD5 131 aa9.19□□□□□ -0.94
KCNQ3-201ENST00000388996 BRWD1-AS2P59051 145 aa9.19□□□□□ -0.94
KCNQ3-201ENST00000388996 FAM19A1Q7Z5A9 133 aa9.19□□□□□ -0.94
KCNQ3-201ENST00000388996 IBA57-AS1B1ANH7 110 aa9.19□□□□□ -0.94
KCNQ3-201ENST00000388996 ZNF843Q8N446 348 aa9.19□□□□□ -0.94
KCNQ3-201ENST00000388996 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
KCNQ3-201ENST00000388996 U3KQK5 164 aa9.18□□□□□ -0.94
KCNQ3-201ENST00000388996 FAM19A5Q7Z5A7 132 aaPredicted RBP9.18□□□□□ -0.94
KCNQ3-201ENST00000388996 C22orf34Q6ZV56 151 aa9.17□□□□□ -0.94
KCNQ3-201ENST00000388996 TRAV10A0A0B4J240 114 aa9.17□□□□□ -0.94
KCNQ3-201ENST00000388996 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
KCNQ3-201ENST00000388996 Q6ZPA2 131 aa9.17□□□□□ -0.94
KCNQ3-201ENST00000388996 C11orf71Q6IPW1 123 aa9.17□□□□□ -0.94
KCNQ3-201ENST00000388996 TRAV23DV6A0A075B6W5 121 aa9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 TRBV6-8A0A0A6YYG3 113 aa9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 ZNF295-AS1Q8N0V1 137 aa9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 LINC00643Q86TS7 51 aa9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 IGLV4-3A0A075B6K6 122 aa9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 LY6G6DO95868 133 aa9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 MLST8Q9BVC4 326 aa9.16□□□□□ -0.94
KCNQ3-201ENST00000388996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.15□□□□□ -0.94
KCNQ3-201ENST00000388996 PTH2Q96A98 100 aa9.15□□□□□ -0.94
KCNQ3-201ENST00000388996 G3V4G9 280 aa9.15□□□□□ -0.94
KCNQ3-201ENST00000388996 TMEM223A0PJW6 202 aa9.15□□□□□ -0.94
KCNQ3-201ENST00000388996 SYCNQ0VAF6 134 aa9.15□□□□□ -0.94
KCNQ3-201ENST00000388996 SPTSSBQ8NFR3 76 aa9.15□□□□□ -0.94
KCNQ3-201ENST00000388996 USP17L23D6RBM5 183 aa9.15□□□□□ -0.95
KCNQ3-201ENST00000388996 CRIP3Q6Q6R5 217 aa9.14□□□□□ -0.95
KCNQ3-201ENST00000388996 C10orf99Q6UWK7 81 aa9.14□□□□□ -0.95
KCNQ3-201ENST00000388996 CASC2Q6XLA1 102 aa9.14□□□□□ -0.95
KCNQ3-201ENST00000388996 RNASE8Q8TDE3 154 aaKnown RBP9.14□□□□□ -0.95
KCNQ3-201ENST00000388996 LINC00482Q8N8I6 264 aa9.14□□□□□ -0.95
KCNQ3-201ENST00000388996 ZNF292O60281 2723 aa9.14□□□□□ -0.95
KCNQ3-201ENST00000388996 BRK1Q8WUW1 75 aa9.14□□□□□ -0.95
KCNQ3-201ENST00000388996 IGLV2-11P01706 119 aa9.13□□□□□ -0.95
KCNQ3-201ENST00000388996 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms