RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 TRBV25-1A0A075B6N4 114 aa15.07■□□□□ 0
GMDS-202ENST00000380815 TRAV8-6A0A0B4J262 113 aa15.07■□□□□ 0
GMDS-202ENST00000380815 H7C423 109 aa15.07■□□□□ 0
GMDS-202ENST00000380815 HINT1P49773 126 aaPredicted RBP15.07■□□□□ 0
GMDS-202ENST00000380815 HERVK_113P61574 105 aa15.07■□□□□ 0
GMDS-202ENST00000380815 TMEM170BQ5T4T1 132 aa15.07■□□□□ 0
GMDS-202ENST00000380815 A0A0J9YXV3 536 aa15.06■□□□□ 0
GMDS-202ENST00000380815 TEX48A0A1B0GUV7 120 aa15.06■□□□□ 0
GMDS-202ENST00000380815 ATP5G1P05496 136 aa15.06■□□□□ 0
GMDS-202ENST00000380815 RNASE13Q5GAN3 156 aaKnown RBP15.06■□□□□ 0
GMDS-202ENST00000380815 MPV17L2Q567V2 206 aa15.06■□□□□ 0
GMDS-202ENST00000380815 TRBV6-8A0A0A6YYG3 113 aa15.05■□□□□ -0
GMDS-202ENST00000380815 UBE2L6O14933 153 aa15.04■□□□□ -0
GMDS-202ENST00000380815 PAX4O43316 350 aa15.04■□□□□ -0
GMDS-202ENST00000380815 MAPKAPK5-AS1Q8N8E1 139 aa15.04■□□□□ -0
GMDS-202ENST00000380815 HIGD1BQ9P298 99 aa15.04■□□□□ -0
GMDS-202ENST00000380815 ATP6V0E2Q8NHE4 81 aa15.03■□□□□ -0
GMDS-202ENST00000380815 ANK2Q01484 3957 aa15.03■□□□□ -0
GMDS-202ENST00000380815 ZNF22P17026 224 aaPredicted RBP15.03■□□□□ -0
GMDS-202ENST00000380815 TINCRA0A1B0GVN0 87 aa15.02□□□□□ -0.01
GMDS-202ENST00000380815 COL5A1-AS1Q5SY13 56 aa15.02□□□□□ -0.01
GMDS-202ENST00000380815 AMMECR1LQ6DCA0 310 aa15.02□□□□□ -0.01
GMDS-202ENST00000380815 OR5A1Q8NGJ0 315 aa15.02□□□□□ -0.01
GMDS-202ENST00000380815 RETNQ9HD89 108 aa15.02□□□□□ -0.01
GMDS-202ENST00000380815 DNAH3Q8TD57 4116 aa15.01□□□□□ -0.01
GMDS-202ENST00000380815 TMEM223A0PJW6 202 aa15.01□□□□□ -0.01
GMDS-202ENST00000380815 UBE2D1P51668 147 aa15.01□□□□□ -0.01
GMDS-202ENST00000380815 BVES-AS1Q5T3Y7 98 aa15.01□□□□□ -0.01
GMDS-202ENST00000380815 VSIG2Q96IQ7 327 aa15.01□□□□□ -0.01
GMDS-202ENST00000380815 MYMXA0A1B0GTQ4 84 aa15.01□□□□□ -0.01
GMDS-202ENST00000380815 ZNF25P17030 456 aaPredicted RBP15.01□□□□□ -0.01
GMDS-202ENST00000380815 CDC42SE2Q9NRR3 84 aa15.01□□□□□ -0.01
GMDS-202ENST00000380815 TMEM101Q96IK0 257 aa15□□□□□ -0.01
GMDS-202ENST00000380815 HSD52Q0P140 79 aa14.99□□□□□ -0.01
GMDS-202ENST00000380815 F5H768 121 aa14.98□□□□□ -0.01
GMDS-202ENST00000380815 MDFIQ99750 246 aa14.98□□□□□ -0.01
GMDS-202ENST00000380815 C11orf68Q9H3H3 251 aaKnown RBP14.98□□□□□ -0.01
GMDS-202ENST00000380815 A0A0J9YY99 117 aa14.98□□□□□ -0.01
GMDS-202ENST00000380815 NOTCH1P46531 2555 aa14.97□□□□□ -0.01
GMDS-202ENST00000380815 TRAV26-1A0A087WT03 109 aa14.97□□□□□ -0.01
GMDS-202ENST00000380815 A0A1B0GV90 55 aa14.97□□□□□ -0.01
GMDS-202ENST00000380815 TIRAPP58753 221 aa14.97□□□□□ -0.01
GMDS-202ENST00000380815 FAM19A3Q7Z5A8 133 aa14.97□□□□□ -0.01
GMDS-202ENST00000380815 CHCHD5Q9BSY4 110 aa14.97□□□□□ -0.01
GMDS-202ENST00000380815 GAGE6Q13070 117 aa14.96□□□□□ -0.01
GMDS-202ENST00000380815 GEMIN7Q9H840 131 aaKnown RBP14.96□□□□□ -0.01
GMDS-202ENST00000380815 ZNF815PA8K554 130 aa14.96□□□□□ -0.02
GMDS-202ENST00000380815 LEPROTO15243 131 aa14.96□□□□□ -0.02
GMDS-202ENST00000380815 C12orf74Q32Q52 190 aa14.96□□□□□ -0.02
GMDS-202ENST00000380815 IGLV5-45A0A087WSX0 123 aa14.95□□□□□ -0.02
GMDS-202ENST00000380815 J3QQQ9 107 aa14.95□□□□□ -0.02
GMDS-202ENST00000380815 SEC11AP67812 179 aa14.95□□□□□ -0.02
GMDS-202ENST00000380815 TSPEAR-AS2P59090 65 aa14.94□□□□□ -0.02
GMDS-202ENST00000380815 KPRPQ5T749 579 aaPredicted RBP14.94□□□□□ -0.02
GMDS-202ENST00000380815 HTN3P15516 51 aa14.93□□□□□ -0.02
GMDS-202ENST00000380815 HERVK_113P63121 156 aa14.93□□□□□ -0.02
GMDS-202ENST00000380815 LINC00242Q5T6M2 205 aa14.93□□□□□ -0.02
GMDS-202ENST00000380815 LINC00469Q8N7U9 141 aa14.93□□□□□ -0.02
GMDS-202ENST00000380815 PLEKHB2Q96CS7 222 aa14.93□□□□□ -0.02
GMDS-202ENST00000380815 NBEAL1Q6ZS30 2694 aa14.92□□□□□ -0.02
GMDS-202ENST00000380815 A0A096LPF7 62 aa14.92□□□□□ -0.02
GMDS-202ENST00000380815 LGALS3P17931 250 aaKnown RBP14.92□□□□□ -0.02
GMDS-202ENST00000380815 MRPL23Q16540 153 aaKnown RBP14.92□□□□□ -0.02
GMDS-202ENST00000380815 TRAV13-1A0A0B4J241 112 aa14.91□□□□□ -0.02
GMDS-202ENST00000380815 PRB2P02812 416 aaPredicted RBP14.91□□□□□ -0.02
GMDS-202ENST00000380815 SH2D6Q7Z4S9 175 aa14.91□□□□□ -0.02
GMDS-202ENST00000380815 ORAOV1Q8WV07 137 aa14.91□□□□□ -0.02
GMDS-202ENST00000380815 IGHV1-58A0A0C4DH39 117 aa14.9□□□□□ -0.02
GMDS-202ENST00000380815 H3BRM9 83 aa14.9□□□□□ -0.02
GMDS-202ENST00000380815 K7EIL1 84 aa14.9□□□□□ -0.02
GMDS-202ENST00000380815 TAL2Q16559 108 aa14.9□□□□□ -0.02
GMDS-202ENST00000380815 CDKN2A-AS1Q9UH64 79 aa14.9□□□□□ -0.02
GMDS-202ENST00000380815 IGLV4-60A0A075B6I1 120 aa14.9□□□□□ -0.02
GMDS-202ENST00000380815 IGHV3-64A0A075B6Q5 118 aa14.9□□□□□ -0.02
GMDS-202ENST00000380815 ICOSQ9Y6W8 199 aa14.9□□□□□ -0.02
GMDS-202ENST00000380815 A0A1B0GUV1 79 aa14.89□□□□□ -0.03
GMDS-202ENST00000380815 IGHV3-30-3P0DP02 117 aa14.89□□□□□ -0.03
GMDS-202ENST00000380815 COX6A2Q02221 97 aa14.89□□□□□ -0.03
GMDS-202ENST00000380815 SCGB1D4Q6XE38 83 aa14.89□□□□□ -0.03
GMDS-202ENST00000380815 TRAV8-3A0A0A6YYJ7 113 aa14.88□□□□□ -0.03
GMDS-202ENST00000380815 A0A0J9YWU9 116 aa14.88□□□□□ -0.03
GMDS-202ENST00000380815 SPATA25Q9BR10 227 aa14.88□□□□□ -0.03
GMDS-202ENST00000380815 SPINK8P0C7L1 97 aa14.87□□□□□ -0.03
GMDS-202ENST00000380815 TM2D2Q9BX73 214 aa14.87□□□□□ -0.03
GMDS-202ENST00000380815 MGAM2Q2M2H8 2515 aa14.87□□□□□ -0.03
GMDS-202ENST00000380815 H3BNG1 76 aa14.86□□□□□ -0.03
GMDS-202ENST00000380815 CEND1Q8N111 149 aa14.86□□□□□ -0.03
GMDS-202ENST00000380815 A6NDN8 102 aa14.85□□□□□ -0.03
GMDS-202ENST00000380815 TMEM262E9PQX1 116 aa14.85□□□□□ -0.03
GMDS-202ENST00000380815 GCSHP23434 173 aa14.85□□□□□ -0.03
GMDS-202ENST00000380815 HIST1H4GQ99525 98 aa14.85□□□□□ -0.03
GMDS-202ENST00000380815 TM2D3Q9BRN9 247 aa14.85□□□□□ -0.03
GMDS-202ENST00000380815 RBX1P62877 108 aa14.85□□□□□ -0.03
GMDS-202ENST00000380815 Q6ZTC4 211 aa14.85□□□□□ -0.03
GMDS-202ENST00000380815 DEFB121Q5J5C9 76 aa14.84□□□□□ -0.03
GMDS-202ENST00000380815 TENM3Q9P273 2699 aa14.83□□□□□ -0.04
GMDS-202ENST00000380815 FXYD2P54710 66 aa14.83□□□□□ -0.04
GMDS-202ENST00000380815 C11orf45Q8TAV5 145 aa14.83□□□□□ -0.04
GMDS-202ENST00000380815 IGLV5-39A0A0G2JS06 123 aa14.82□□□□□ -0.04
GMDS-202ENST00000380815 LELP1Q5T871 98 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms